RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 GCC2Q8IWJ2 1684 aa25.94■■□□□ 1.74
CAPRIN1-216ENST00000534042 FAM135BQ49AJ0 1406 aa25.94■■□□□ 1.74
CAPRIN1-216ENST00000534042 PPP1R15AO75807 674 aaPredicted RBP25.93■■□□□ 1.74
CAPRIN1-216ENST00000534042 RBM33Q96EV2 1170 aaKnown RBP25.93■■□□□ 1.74
CAPRIN1-216ENST00000534042 UNC13BO14795 1591 aa25.93■■□□□ 1.74
CAPRIN1-216ENST00000534042 ROCK1Q13464 1354 aa25.92■■□□□ 1.74
CAPRIN1-216ENST00000534042 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
CAPRIN1-216ENST00000534042 ZFYVE9O95405 1425 aa25.91■■□□□ 1.74
CAPRIN1-216ENST00000534042 RIMS2Q9UQ26 1411 aa25.91■■□□□ 1.74
CAPRIN1-216ENST00000534042 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
CAPRIN1-216ENST00000534042 CHGAP10645 457 aaKnown RBP25.9■■□□□ 1.74
CAPRIN1-216ENST00000534042 PLEKHG1Q9ULL1 1385 aa25.9■■□□□ 1.74
CAPRIN1-216ENST00000534042 TMEM131LA2VDJ0 1609 aa25.89■■□□□ 1.74
CAPRIN1-216ENST00000534042 E9PCH4 1651 aa25.87■■□□□ 1.73
CAPRIN1-216ENST00000534042 ITGAEP38570 1179 aa25.86■■□□□ 1.73
CAPRIN1-216ENST00000534042 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
CAPRIN1-216ENST00000534042 MSH6P52701 1360 aa25.85■■□□□ 1.73
CAPRIN1-216ENST00000534042 CHD2O14647 1828 aaKnown RBP25.85■■□□□ 1.73
CAPRIN1-216ENST00000534042 IQGAP3Q86VI3 1631 aa25.84■■□□□ 1.73
CAPRIN1-216ENST00000534042 ROBO1Q9Y6N7 1651 aa25.83■■□□□ 1.73
CAPRIN1-216ENST00000534042 NUP155O75694 1391 aa25.83■■□□□ 1.73
CAPRIN1-216ENST00000534042 TBX22Q9Y458 520 aa25.83■■□□□ 1.73
CAPRIN1-216ENST00000534042 NUTM2DQ5VT03 806 aaPredicted RBP25.81■■□□□ 1.72
CAPRIN1-216ENST00000534042 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
CAPRIN1-216ENST00000534042 SLAIN2Q9P270 581 aa25.79■■□□□ 1.72
CAPRIN1-216ENST00000534042 RGS17Q9UGC6 210 aaPredicted RBP25.77■■□□□ 1.72
CAPRIN1-216ENST00000534042 ADAMTS13Q76LX8 1427 aa25.75■■□□□ 1.71
CAPRIN1-216ENST00000534042 C14orf37Q86TY3 774 aa25.74■■□□□ 1.71
CAPRIN1-216ENST00000534042 NCOA3Q9Y6Q9 1424 aa25.73■■□□□ 1.71
CAPRIN1-216ENST00000534042 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
CAPRIN1-216ENST00000534042 PIK3R4Q99570 1358 aa25.71■■□□□ 1.71
CAPRIN1-216ENST00000534042 PHLPP1O60346 1717 aa25.7■■□□□ 1.7
CAPRIN1-216ENST00000534042 C19orf44Q9H6X5 657 aa25.67■■□□□ 1.7
CAPRIN1-216ENST00000534042 TRPM2O94759 1503 aa25.67■■□□□ 1.7
CAPRIN1-216ENST00000534042 CADPS2Q86UW7 1296 aa25.66■■□□□ 1.7
CAPRIN1-216ENST00000534042 AMOTL2Q9Y2J4 779 aa25.66■■□□□ 1.7
CAPRIN1-216ENST00000534042 JCADQ9P266 1359 aa25.66■■□□□ 1.7
CAPRIN1-216ENST00000534042 SPHKAPQ2M3C7 1700 aa25.66■■□□□ 1.7
CAPRIN1-216ENST00000534042 ATF3P18847 181 aa25.65■■□□□ 1.7
CAPRIN1-216ENST00000534042 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
CAPRIN1-216ENST00000534042 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
CAPRIN1-216ENST00000534042 POTEAQ6S8J7 498 aa25.63■■□□□ 1.69
CAPRIN1-216ENST00000534042 PTPRUQ92729 1446 aa25.62■■□□□ 1.69
CAPRIN1-216ENST00000534042 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
CAPRIN1-216ENST00000534042 SETBP1Q9Y6X0 1596 aa25.57■■□□□ 1.68
CAPRIN1-216ENST00000534042 RRBP1Q9P2E9 1410 aaKnown RBP25.57■■□□□ 1.68
CAPRIN1-216ENST00000534042 NRXN3Q9Y4C0 1643 aa25.56■■□□□ 1.68
CAPRIN1-216ENST00000534042 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
CAPRIN1-216ENST00000534042 XRN1Q8IZH2 1706 aaKnown RBP25.53■■□□□ 1.68
CAPRIN1-216ENST00000534042 SPATA31A6Q5VVP1 1343 aa25.53■■□□□ 1.68
CAPRIN1-216ENST00000534042 NAIPQ13075 1403 aa25.53■■□□□ 1.68
CAPRIN1-216ENST00000534042 CLTCL1P53675 1640 aa25.52■■□□□ 1.68
CAPRIN1-216ENST00000534042 DCCP43146 1447 aa25.52■■□□□ 1.68
CAPRIN1-216ENST00000534042 BRINP3Q76B58 766 aa25.51■■□□□ 1.67
CAPRIN1-216ENST00000534042 METP08581 1390 aa25.51■■□□□ 1.67
CAPRIN1-216ENST00000534042 KIF1BO60333 1816 aa25.51■■□□□ 1.67
CAPRIN1-216ENST00000534042 MEX3CQ5U5Q3 659 aaKnown RBP25.49■■□□□ 1.67
CAPRIN1-216ENST00000534042 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
CAPRIN1-216ENST00000534042 NEXMIFQ5QGS0 1516 aa25.48■■□□□ 1.67
CAPRIN1-216ENST00000534042 SHPRHQ149N8 1683 aa25.46■■□□□ 1.67
CAPRIN1-216ENST00000534042 LRP6O75581 1613 aa25.46■■□□□ 1.67
CAPRIN1-216ENST00000534042 MST1RQ04912 1400 aa25.44■■□□□ 1.66
CAPRIN1-216ENST00000534042 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
CAPRIN1-216ENST00000534042 VGFO15240 615 aaPredicted RBP25.42■■□□□ 1.66
CAPRIN1-216ENST00000534042 ZNF772Q68DY9 489 aaPredicted RBP25.42■■□□□ 1.66
CAPRIN1-216ENST00000534042 HFM1A2PYH4 1435 aa25.42■■□□□ 1.66
CAPRIN1-216ENST00000534042 ADGRL3Q9HAR2 1447 aa25.42■■□□□ 1.66
CAPRIN1-216ENST00000534042 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
CAPRIN1-216ENST00000534042 NUTM2BA6NNL0 878 aaPredicted RBP25.39■■□□□ 1.66
CAPRIN1-216ENST00000534042 NUTM2EB1AL46 878 aaPredicted RBP25.39■■□□□ 1.66
CAPRIN1-216ENST00000534042 NUTM2AQ8IVF1 878 aaPredicted RBP25.39■■□□□ 1.66
CAPRIN1-216ENST00000534042 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
CAPRIN1-216ENST00000534042 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
CAPRIN1-216ENST00000534042 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
CAPRIN1-216ENST00000534042 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
CAPRIN1-216ENST00000534042 LRRC59Q96AG4 307 aaKnown RBP25.36■■□□□ 1.65
CAPRIN1-216ENST00000534042 NALCNQ8IZF0 1738 aa25.36■■□□□ 1.65
CAPRIN1-216ENST00000534042 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
CAPRIN1-216ENST00000534042 DDX17Q92841 729 aaKnown RBP25.32■■□□□ 1.64
CAPRIN1-216ENST00000534042 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
CAPRIN1-216ENST00000534042 C1orf167Q5SNV9 1468 aa25.29■■□□□ 1.64
CAPRIN1-216ENST00000534042 PPLO60437 1756 aa25.29■■□□□ 1.64
CAPRIN1-216ENST00000534042 RXRBP28702 533 aa25.29■■□□□ 1.64
CAPRIN1-216ENST00000534042 AFF2P51816 1311 aa25.28■■□□□ 1.64
CAPRIN1-216ENST00000534042 FOXD1Q16676 465 aa25.27■■□□□ 1.64
CAPRIN1-216ENST00000534042 PNPLA6Q8IY17 1366 aa25.27■■□□□ 1.64
CAPRIN1-216ENST00000534042 PRAG1Q86YV5 1406 aa25.25■■□□□ 1.63
CAPRIN1-216ENST00000534042 ORAI2Q96SN7 254 aa25.23■■□□□ 1.63
CAPRIN1-216ENST00000534042 C8orf37Q96NL8 207 aa25.22■■□□□ 1.63
CAPRIN1-216ENST00000534042 CCDC144AA2RUR9 1427 aa25.21■■□□□ 1.63
CAPRIN1-216ENST00000534042 RGL3Q3MIN7 710 aa25.2■■□□□ 1.62
CAPRIN1-216ENST00000534042 UPF1Q92900 1129 aaKnown RBP eCLIP25.2■■□□□ 1.62
CAPRIN1-216ENST00000534042 LAMC1P11047 1609 aa25.19■■□□□ 1.62
CAPRIN1-216ENST00000534042 SOS2Q07890 1332 aaPredicted RBP25.19■■□□□ 1.62
CAPRIN1-216ENST00000534042 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
CAPRIN1-216ENST00000534042 MPHOSPH9Q99550 1183 aa25.19■■□□□ 1.62
CAPRIN1-216ENST00000534042 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
CAPRIN1-216ENST00000534042 ADAMTS2O95450 1211 aa25.17■■□□□ 1.62
CAPRIN1-216ENST00000534042 QTRT2Q9H974 415 aaKnown RBP25.17■■□□□ 1.62
CAPRIN1-216ENST00000534042 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms