RNA–Protein interactions for RNA: ENST00000533888.1

GSDMD-214, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-214ENST00000533888 TMEM131LA2VDJ0 1609 aa24.21■■□□□ 1.47
GSDMD-214ENST00000533888 TMEM94Q12767 1356 aa24.19■■□□□ 1.46
GSDMD-214ENST00000533888 KCNA6P17658 529 aa24.19■■□□□ 1.46
GSDMD-214ENST00000533888 IQGAP3Q86VI3 1631 aa24.19■■□□□ 1.46
GSDMD-214ENST00000533888 ITGAEP38570 1179 aa24.18■■□□□ 1.46
GSDMD-214ENST00000533888 NWD1Q149M9 1564 aa24.17■■□□□ 1.46
GSDMD-214ENST00000533888 RBM33Q96EV2 1170 aaKnown RBP24.17■■□□□ 1.46
GSDMD-214ENST00000533888 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
GSDMD-214ENST00000533888 PLEKHG1Q9ULL1 1385 aa24.14■■□□□ 1.45
GSDMD-214ENST00000533888 PROSER2Q86WR7 435 aaPredicted RBP24.12■■□□□ 1.45
GSDMD-214ENST00000533888 NUP155O75694 1391 aa24.12■■□□□ 1.45
GSDMD-214ENST00000533888 NKTRP30414 1462 aaKnown RBP24.12■■□□□ 1.45
GSDMD-214ENST00000533888 BCANQ96GW7 911 aa24.11■■□□□ 1.45
GSDMD-214ENST00000533888 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
GSDMD-214ENST00000533888 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
GSDMD-214ENST00000533888 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
GSDMD-214ENST00000533888 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
GSDMD-214ENST00000533888 PPP1R15AO75807 674 aaPredicted RBP24.07■■□□□ 1.44
GSDMD-214ENST00000533888 ROBO1Q9Y6N7 1651 aa24.06■■□□□ 1.44
GSDMD-214ENST00000533888 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
GSDMD-214ENST00000533888 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
GSDMD-214ENST00000533888 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
GSDMD-214ENST00000533888 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
GSDMD-214ENST00000533888 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
GSDMD-214ENST00000533888 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
GSDMD-214ENST00000533888 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
GSDMD-214ENST00000533888 MSH6P52701 1360 aa23.99■■□□□ 1.43
GSDMD-214ENST00000533888 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
GSDMD-214ENST00000533888 RGS17Q9UGC6 210 aaPredicted RBP23.96■■□□□ 1.43
GSDMD-214ENST00000533888 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.43
GSDMD-214ENST00000533888 NAIPQ13075 1403 aa23.95■■□□□ 1.42
GSDMD-214ENST00000533888 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
GSDMD-214ENST00000533888 SLAIN2Q9P270 581 aa23.94■■□□□ 1.42
GSDMD-214ENST00000533888 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
GSDMD-214ENST00000533888 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
GSDMD-214ENST00000533888 TRPM2O94759 1503 aa23.91■■□□□ 1.42
GSDMD-214ENST00000533888 NCOA3Q9Y6Q9 1424 aa23.91■■□□□ 1.42
GSDMD-214ENST00000533888 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
GSDMD-214ENST00000533888 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
GSDMD-214ENST00000533888 SETBP1Q9Y6X0 1596 aa23.89■■□□□ 1.41
GSDMD-214ENST00000533888 AMOTL2Q9Y2J4 779 aa23.88■■□□□ 1.41
GSDMD-214ENST00000533888 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
GSDMD-214ENST00000533888 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
GSDMD-214ENST00000533888 COL16A1Q07092 1604 aaPredicted RBP23.85■■□□□ 1.41
GSDMD-214ENST00000533888 ZNF326Q5BKZ1 582 aaKnown RBP23.85■■□□□ 1.41
GSDMD-214ENST00000533888 C14orf37Q86TY3 774 aa23.85■■□□□ 1.41
GSDMD-214ENST00000533888 METP08581 1390 aa23.83■■□□□ 1.41
GSDMD-214ENST00000533888 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
GSDMD-214ENST00000533888 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
GSDMD-214ENST00000533888 KIF1BO60333 1816 aa23.81■■□□□ 1.4
GSDMD-214ENST00000533888 POTEAQ6S8J7 498 aa23.8■■□□□ 1.4
GSDMD-214ENST00000533888 JCADQ9P266 1359 aa23.79■■□□□ 1.4
GSDMD-214ENST00000533888 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
GSDMD-214ENST00000533888 AHDC1Q5TGY3 1603 aaPredicted RBP23.78■■□□□ 1.4
GSDMD-214ENST00000533888 ATF3P18847 181 aa23.78■■□□□ 1.4
GSDMD-214ENST00000533888 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
GSDMD-214ENST00000533888 LRP6O75581 1613 aa23.74■■□□□ 1.39
GSDMD-214ENST00000533888 BRINP3Q76B58 766 aa23.74■■□□□ 1.39
GSDMD-214ENST00000533888 DCCP43146 1447 aa23.74■■□□□ 1.39
GSDMD-214ENST00000533888 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
GSDMD-214ENST00000533888 MST1RQ04912 1400 aa23.72■■□□□ 1.39
GSDMD-214ENST00000533888 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
GSDMD-214ENST00000533888 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
GSDMD-214ENST00000533888 SHPRHQ149N8 1683 aa23.7■■□□□ 1.39
GSDMD-214ENST00000533888 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
GSDMD-214ENST00000533888 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
GSDMD-214ENST00000533888 FOXD1Q16676 465 aa23.68■■□□□ 1.38
GSDMD-214ENST00000533888 PPLO60437 1756 aa23.68■■□□□ 1.38
GSDMD-214ENST00000533888 NHSL1Q5SYE7 1610 aa23.66■■□□□ 1.38
GSDMD-214ENST00000533888 SPATA31A6Q5VVP1 1343 aa23.65■■□□□ 1.38
GSDMD-214ENST00000533888 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
GSDMD-214ENST00000533888 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
GSDMD-214ENST00000533888 PTCH1Q13635 1447 aa23.62■■□□□ 1.37
GSDMD-214ENST00000533888 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
GSDMD-214ENST00000533888 RPGRIP1LQ68CZ1 1315 aa23.61■■□□□ 1.37
GSDMD-214ENST00000533888 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
GSDMD-214ENST00000533888 PRAG1Q86YV5 1406 aa23.59■■□□□ 1.37
GSDMD-214ENST00000533888 C1orf167Q5SNV9 1468 aa23.57■■□□□ 1.36
GSDMD-214ENST00000533888 MEX3CQ5U5Q3 659 aaKnown RBP23.57■■□□□ 1.36
GSDMD-214ENST00000533888 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
GSDMD-214ENST00000533888 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
GSDMD-214ENST00000533888 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
GSDMD-214ENST00000533888 SPATA31E1Q6ZUB1 1445 aa23.56■■□□□ 1.36
GSDMD-214ENST00000533888 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
GSDMD-214ENST00000533888 IFT172Q9UG01 1749 aa23.55■■□□□ 1.36
GSDMD-214ENST00000533888 CCDC144AA2RUR9 1427 aa23.54■■□□□ 1.36
GSDMD-214ENST00000533888 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
GSDMD-214ENST00000533888 LAMC1P11047 1609 aa23.52■■□□□ 1.36
GSDMD-214ENST00000533888 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
GSDMD-214ENST00000533888 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
GSDMD-214ENST00000533888 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
GSDMD-214ENST00000533888 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
GSDMD-214ENST00000533888 ZNF772Q68DY9 489 aaPredicted RBP23.5■■□□□ 1.35
GSDMD-214ENST00000533888 AFF2P51816 1311 aa23.46■■□□□ 1.35
GSDMD-214ENST00000533888 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
GSDMD-214ENST00000533888 ANKRD30BQ9BXX2 1392 aa23.44■■□□□ 1.34
GSDMD-214ENST00000533888 SOS2Q07890 1332 aaPredicted RBP23.44■■□□□ 1.34
GSDMD-214ENST00000533888 TECPR2O15040 1411 aa23.43■■□□□ 1.34
GSDMD-214ENST00000533888 PIK3C2GO75747 1445 aa23.43■■□□□ 1.34
GSDMD-214ENST00000533888 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms