RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
CHKA-207ENST00000533728 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
CHKA-207ENST00000533728 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
CHKA-207ENST00000533728 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
CHKA-207ENST00000533728 SHPRHQ149N8 1683 aa13.74□□□□□ -0.21
CHKA-207ENST00000533728 PZPP20742 1482 aa13.74□□□□□ -0.21
CHKA-207ENST00000533728 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
CHKA-207ENST00000533728 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
CHKA-207ENST00000533728 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
CHKA-207ENST00000533728 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
CHKA-207ENST00000533728 QTRT2Q9H974 415 aaKnown RBP13.71□□□□□ -0.21
CHKA-207ENST00000533728 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
CHKA-207ENST00000533728 TNRQ92752 1358 aa13.71□□□□□ -0.22
CHKA-207ENST00000533728 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
CHKA-207ENST00000533728 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
CHKA-207ENST00000533728 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
CHKA-207ENST00000533728 ATP7AQ04656 1500 aa13.69□□□□□ -0.22
CHKA-207ENST00000533728 UNC13BO14795 1591 aa13.69□□□□□ -0.22
CHKA-207ENST00000533728 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
CHKA-207ENST00000533728 SLC34A2O95436 690 aa13.68□□□□□ -0.22
CHKA-207ENST00000533728 C1QTNF8P60827 252 aa13.68□□□□□ -0.22
CHKA-207ENST00000533728 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
CHKA-207ENST00000533728 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
CHKA-207ENST00000533728 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHKA-207ENST00000533728 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
CHKA-207ENST00000533728 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
CHKA-207ENST00000533728 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
CHKA-207ENST00000533728 PSDA5PKW4 1024 aaPredicted RBP13.64□□□□□ -0.23
CHKA-207ENST00000533728 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
CHKA-207ENST00000533728 GGT6Q6P531 493 aa13.63□□□□□ -0.23
CHKA-207ENST00000533728 IQGAP3Q86VI3 1631 aa13.63□□□□□ -0.23
CHKA-207ENST00000533728 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
CHKA-207ENST00000533728 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
CHKA-207ENST00000533728 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
CHKA-207ENST00000533728 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
CHKA-207ENST00000533728 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
CHKA-207ENST00000533728 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
CHKA-207ENST00000533728 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
CHKA-207ENST00000533728 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
CHKA-207ENST00000533728 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
CHKA-207ENST00000533728 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
CHKA-207ENST00000533728 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
CHKA-207ENST00000533728 A2MP01023 1474 aa13.59□□□□□ -0.23
CHKA-207ENST00000533728 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
CHKA-207ENST00000533728 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
CHKA-207ENST00000533728 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
CHKA-207ENST00000533728 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
CHKA-207ENST00000533728 PCDH10Q9P2E7 1040 aa13.57□□□□□ -0.24
CHKA-207ENST00000533728 MSH6P52701 1360 aa13.57□□□□□ -0.24
CHKA-207ENST00000533728 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CHKA-207ENST00000533728 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
CHKA-207ENST00000533728 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
CHKA-207ENST00000533728 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHKA-207ENST00000533728 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
CHKA-207ENST00000533728 NUP155O75694 1391 aa13.55□□□□□ -0.24
CHKA-207ENST00000533728 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
CHKA-207ENST00000533728 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
CHKA-207ENST00000533728 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
CHKA-207ENST00000533728 DIP2AQ14689 1571 aa13.54□□□□□ -0.24
CHKA-207ENST00000533728 UTRNP46939 3433 aa13.52□□□□□ -0.25
CHKA-207ENST00000533728 RALGAPBQ86X10 1494 aa13.52□□□□□ -0.25
CHKA-207ENST00000533728 LAMC1P11047 1609 aa13.52□□□□□ -0.25
CHKA-207ENST00000533728 MROH1Q8NDA8 1641 aa13.51□□□□□ -0.25
CHKA-207ENST00000533728 ANP32CO43423 234 aa13.51□□□□□ -0.25
CHKA-207ENST00000533728 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
CHKA-207ENST00000533728 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
CHKA-207ENST00000533728 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
CHKA-207ENST00000533728 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
CHKA-207ENST00000533728 ABCC3O15438 1527 aa13.5□□□□□ -0.25
CHKA-207ENST00000533728 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
CHKA-207ENST00000533728 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
CHKA-207ENST00000533728 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
CHKA-207ENST00000533728 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
CHKA-207ENST00000533728 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
CHKA-207ENST00000533728 KCNA6P17658 529 aa13.47□□□□□ -0.25
CHKA-207ENST00000533728 TET3O43151 1660 aa13.47□□□□□ -0.25
CHKA-207ENST00000533728 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
CHKA-207ENST00000533728 CEP152O94986 1710 aa13.46□□□□□ -0.25
CHKA-207ENST00000533728 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
CHKA-207ENST00000533728 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
CHKA-207ENST00000533728 LTKP29376 864 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 USP21Q9UK80 565 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 CHD4Q14839 1912 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 E9PCH4 1651 aa13.44□□□□□ -0.26
CHKA-207ENST00000533728 CAPN15O75808 1086 aa13.43□□□□□ -0.26
CHKA-207ENST00000533728 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
CHKA-207ENST00000533728 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
CHKA-207ENST00000533728 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
CHKA-207ENST00000533728 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
CHKA-207ENST00000533728 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
CHKA-207ENST00000533728 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
CHKA-207ENST00000533728 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
CHKA-207ENST00000533728 ATRNO75882 1429 aa13.41□□□□□ -0.26
CHKA-207ENST00000533728 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
CHKA-207ENST00000533728 KIF3BO15066 747 aa13.4□□□□□ -0.26
CHKA-207ENST00000533728 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
CHKA-207ENST00000533728 USP47Q96K76 1375 aa13.4□□□□□ -0.26
CHKA-207ENST00000533728 TRPM2O94759 1503 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms