RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 STRCQ7RTU9 1775 aa24.02■■□□□ 1.44
PACSIN3-210ENST00000533686 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
PACSIN3-210ENST00000533686 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
PACSIN3-210ENST00000533686 SCAF11Q99590 1463 aaKnown RBP24.01■■□□□ 1.43
PACSIN3-210ENST00000533686 MED14O60244 1454 aa24■■□□□ 1.43
PACSIN3-210ENST00000533686 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
PACSIN3-210ENST00000533686 NPHP4O75161 1426 aaPredicted RBP23.96■■□□□ 1.43
PACSIN3-210ENST00000533686 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
PACSIN3-210ENST00000533686 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
PACSIN3-210ENST00000533686 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
PACSIN3-210ENST00000533686 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
PACSIN3-210ENST00000533686 PLEKHG1Q9ULL1 1385 aa23.92■■□□□ 1.42
PACSIN3-210ENST00000533686 VGFO15240 615 aaPredicted RBP23.92■■□□□ 1.42
PACSIN3-210ENST00000533686 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
PACSIN3-210ENST00000533686 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
PACSIN3-210ENST00000533686 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
PACSIN3-210ENST00000533686 STAC3Q96MF2 364 aa23.88■■□□□ 1.41
PACSIN3-210ENST00000533686 IQGAP1P46940 1657 aa23.87■■□□□ 1.41
PACSIN3-210ENST00000533686 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
PACSIN3-210ENST00000533686 BCANQ96GW7 911 aa23.85■■□□□ 1.41
PACSIN3-210ENST00000533686 PPLO60437 1756 aa23.85■■□□□ 1.41
PACSIN3-210ENST00000533686 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
PACSIN3-210ENST00000533686 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
PACSIN3-210ENST00000533686 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
PACSIN3-210ENST00000533686 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 MYOM2P54296 1465 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 DCAF11Q8TEB1 546 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 SLC26A8Q96RN1 970 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 ADAMTS13Q76LX8 1427 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
PACSIN3-210ENST00000533686 L3MBTL2Q969R5 705 aa23.78■■□□□ 1.4
PACSIN3-210ENST00000533686 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
PACSIN3-210ENST00000533686 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
PACSIN3-210ENST00000533686 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
PACSIN3-210ENST00000533686 KDM2AQ9Y2K7 1162 aa23.76■■□□□ 1.39
PACSIN3-210ENST00000533686 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
PACSIN3-210ENST00000533686 NRXN3Q9Y4C0 1643 aa23.75■■□□□ 1.39
PACSIN3-210ENST00000533686 PIK3R4Q99570 1358 aa23.75■■□□□ 1.39
PACSIN3-210ENST00000533686 ZNF335Q9H4Z2 1342 aaPredicted RBP23.74■■□□□ 1.39
PACSIN3-210ENST00000533686 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
PACSIN3-210ENST00000533686 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
PACSIN3-210ENST00000533686 KCNA6P17658 529 aa23.71■■□□□ 1.39
PACSIN3-210ENST00000533686 C14orf93Q9H972 538 aaKnown RBP23.71■■□□□ 1.39
PACSIN3-210ENST00000533686 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
PACSIN3-210ENST00000533686 METP08581 1390 aa23.68■■□□□ 1.38
PACSIN3-210ENST00000533686 LTBP4Q8N2S1 1624 aa23.67■■□□□ 1.38
PACSIN3-210ENST00000533686 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
PACSIN3-210ENST00000533686 PRAG1Q86YV5 1406 aa23.66■■□□□ 1.38
PACSIN3-210ENST00000533686 CPS1P31327 1500 aa23.64■■□□□ 1.38
PACSIN3-210ENST00000533686 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
PACSIN3-210ENST00000533686 NWD1Q149M9 1564 aa23.64■■□□□ 1.37
PACSIN3-210ENST00000533686 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.37
PACSIN3-210ENST00000533686 AMOTL2Q9Y2J4 779 aa23.63■■□□□ 1.37
PACSIN3-210ENST00000533686 LAMC1P11047 1609 aa23.62■■□□□ 1.37
PACSIN3-210ENST00000533686 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
PACSIN3-210ENST00000533686 NKTRP30414 1462 aaKnown RBP23.61■■□□□ 1.37
PACSIN3-210ENST00000533686 STRCP1A6NGW2 1772 aa23.6■■□□□ 1.37
PACSIN3-210ENST00000533686 TMEM132EQ6IEE7 984 aa23.59■■□□□ 1.37
PACSIN3-210ENST00000533686 LRPPRCP42704 1394 aaKnown RBP23.58■■□□□ 1.37
PACSIN3-210ENST00000533686 ASXL1Q8IXJ9 1541 aa23.58■■□□□ 1.36
PACSIN3-210ENST00000533686 CERKQ8TCT0 537 aa23.57■■□□□ 1.36
PACSIN3-210ENST00000533686 ABCC11Q96J66 1382 aa23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 LRRC7Q96NW7 1537 aa23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 NBPF8Q3BBV2 869 aa23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
PACSIN3-210ENST00000533686 YTHDC2Q9H6S0 1430 aaKnown RBP23.55■■□□□ 1.36
PACSIN3-210ENST00000533686 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
PACSIN3-210ENST00000533686 TECPR2O15040 1411 aa23.54■■□□□ 1.36
PACSIN3-210ENST00000533686 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
PACSIN3-210ENST00000533686 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
PACSIN3-210ENST00000533686 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
PACSIN3-210ENST00000533686 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
PACSIN3-210ENST00000533686 NBPF1Q3BBV0 1214 aa23.52■■□□□ 1.36
PACSIN3-210ENST00000533686 STK26Q9P289 416 aa23.52■■□□□ 1.36
PACSIN3-210ENST00000533686 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
PACSIN3-210ENST00000533686 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
PACSIN3-210ENST00000533686 TRPM1Q7Z4N2 1603 aa23.48■■□□□ 1.35
PACSIN3-210ENST00000533686 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
PACSIN3-210ENST00000533686 ROCK2O75116 1388 aaKnown RBP23.46■■□□□ 1.35
PACSIN3-210ENST00000533686 GPRASP1Q5JY77 1395 aa23.46■■□□□ 1.35
PACSIN3-210ENST00000533686 KNDC1Q76NI1 1749 aa23.46■■□□□ 1.35
PACSIN3-210ENST00000533686 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
PACSIN3-210ENST00000533686 RALGAPBQ86X10 1494 aa23.45■■□□□ 1.34
PACSIN3-210ENST00000533686 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
PACSIN3-210ENST00000533686 TRAK1Q9UPV9 953 aa23.45■■□□□ 1.34
PACSIN3-210ENST00000533686 WAPLQ7Z5K2 1190 aa23.42■■□□□ 1.34
PACSIN3-210ENST00000533686 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
PACSIN3-210ENST00000533686 XIRP1Q702N8 1843 aaKnown RBP23.41■■□□□ 1.34
PACSIN3-210ENST00000533686 MSH6P52701 1360 aa23.4■■□□□ 1.34
PACSIN3-210ENST00000533686 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
PACSIN3-210ENST00000533686 PRAM1Q96QH2 718 aa23.4■■□□□ 1.34
PACSIN3-210ENST00000533686 PLEKHH1Q9ULM0 1364 aa23.4■■□□□ 1.34
PACSIN3-210ENST00000533686 CARD11Q9BXL7 1154 aa23.39■■□□□ 1.33
PACSIN3-210ENST00000533686 POGKQ9P215 609 aa23.39■■□□□ 1.33
PACSIN3-210ENST00000533686 ADGRL3Q9HAR2 1447 aa23.39■■□□□ 1.33
PACSIN3-210ENST00000533686 DCCP43146 1447 aa23.36■■□□□ 1.33
PACSIN3-210ENST00000533686 TOM1O60784 492 aa23.35■■□□□ 1.33
PACSIN3-210ENST00000533686 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms