RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 RIMS2Q9UQ26 1411 aa30.86■■■□□ 2.53
VPS51-211ENST00000533487 LTKP29376 864 aa30.85■■■□□ 2.53
VPS51-211ENST00000533487 FOXD1Q16676 465 aa30.83■■■□□ 2.53
VPS51-211ENST00000533487 RPGRIP1LQ68CZ1 1315 aa30.8■■■□□ 2.52
VPS51-211ENST00000533487 ANKRD30BQ9BXX2 1392 aa30.79■■■□□ 2.52
VPS51-211ENST00000533487 PLEKHG1Q9ULL1 1385 aa30.79■■■□□ 2.52
VPS51-211ENST00000533487 PPP1R15AO75807 674 aaPredicted RBP30.76■■■□□ 2.51
VPS51-211ENST00000533487 ZNF326Q5BKZ1 582 aaKnown RBP30.76■■■□□ 2.51
VPS51-211ENST00000533487 NEXMIFQ5QGS0 1516 aa30.74■■■□□ 2.51
VPS51-211ENST00000533487 SPATA31E1Q6ZUB1 1445 aa30.73■■■□□ 2.51
VPS51-211ENST00000533487 DIP2AQ14689 1571 aa30.71■■■□□ 2.51
VPS51-211ENST00000533487 PPLO60437 1756 aa30.7■■■□□ 2.51
VPS51-211ENST00000533487 LTBP4Q8N2S1 1624 aa30.69■■■□□ 2.5
VPS51-211ENST00000533487 VGFO15240 615 aaPredicted RBP30.69■■■□□ 2.5
VPS51-211ENST00000533487 CPS1P31327 1500 aa30.68■■■□□ 2.5
VPS51-211ENST00000533487 SETBP1Q9Y6X0 1596 aa30.66■■■□□ 2.5
VPS51-211ENST00000533487 IQSEC2Q5JU85 1478 aa30.65■■■□□ 2.5
VPS51-211ENST00000533487 IFT172Q9UG01 1749 aa30.65■■■□□ 2.5
VPS51-211ENST00000533487 TBX22Q9Y458 520 aa30.64■■■□□ 2.5
VPS51-211ENST00000533487 BCANQ96GW7 911 aa30.63■■■□□ 2.49
VPS51-211ENST00000533487 ZNF335Q9H4Z2 1342 aaPredicted RBP30.63■■■□□ 2.49
VPS51-211ENST00000533487 PIK3R4Q99570 1358 aa30.62■■■□□ 2.49
VPS51-211ENST00000533487 STAC3Q96MF2 364 aa30.6■■■□□ 2.49
VPS51-211ENST00000533487 ADAMTS13Q76LX8 1427 aa30.59■■■□□ 2.49
VPS51-211ENST00000533487 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
VPS51-211ENST00000533487 NRXN3Q9Y4C0 1643 aa30.58■■■□□ 2.49
VPS51-211ENST00000533487 DHX57Q6P158 1386 aaKnown RBP30.57■■■□□ 2.48
VPS51-211ENST00000533487 CHD2O14647 1828 aaKnown RBP30.57■■■□□ 2.48
VPS51-211ENST00000533487 RGL3Q3MIN7 710 aa30.56■■■□□ 2.48
VPS51-211ENST00000533487 NUTM2DQ5VT03 806 aaPredicted RBP30.56■■■□□ 2.48
VPS51-211ENST00000533487 SLC26A8Q96RN1 970 aa30.56■■■□□ 2.48
VPS51-211ENST00000533487 NWD1Q149M9 1564 aa30.56■■■□□ 2.48
VPS51-211ENST00000533487 KCNA6P17658 529 aa30.54■■■□□ 2.48
VPS51-211ENST00000533487 MYOM2P54296 1465 aa30.54■■■□□ 2.48
VPS51-211ENST00000533487 STRCP1A6NGW2 1772 aa30.54■■■□□ 2.48
VPS51-211ENST00000533487 NKTRP30414 1462 aaKnown RBP30.52■■■□□ 2.48
VPS51-211ENST00000533487 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
VPS51-211ENST00000533487 NRXN1Q9ULB1 1477 aa30.47■■■□□ 2.47
VPS51-211ENST00000533487 SETD1AO15047 1707 aaKnown RBP30.46■■■□□ 2.47
VPS51-211ENST00000533487 ALKQ9UM73 1620 aa30.46■■■□□ 2.47
VPS51-211ENST00000533487 LAMC1P11047 1609 aa30.45■■■□□ 2.47
VPS51-211ENST00000533487 PIK3C2GO75747 1445 aa30.45■■■□□ 2.46
VPS51-211ENST00000533487 LRRC7Q96NW7 1537 aa30.44■■■□□ 2.46
VPS51-211ENST00000533487 ADGRF5Q8IZF2 1346 aa30.43■■■□□ 2.46
VPS51-211ENST00000533487 NCOA3Q9Y6Q9 1424 aa30.4■■■□□ 2.46
VPS51-211ENST00000533487 XRN1Q8IZH2 1706 aaKnown RBP30.4■■■□□ 2.46
VPS51-211ENST00000533487 PRAG1Q86YV5 1406 aa30.38■■■□□ 2.45
VPS51-211ENST00000533487 METP08581 1390 aa30.37■■■□□ 2.45
VPS51-211ENST00000533487 DCAF11Q8TEB1 546 aa30.36■■■□□ 2.45
VPS51-211ENST00000533487 FBXO41Q8TF61 875 aa30.36■■■□□ 2.45
VPS51-211ENST00000533487 SENP3Q9H4L4 574 aaPredicted RBP30.35■■■□□ 2.45
VPS51-211ENST00000533487 CLSPNQ9HAW4 1339 aa30.35■■■□□ 2.45
VPS51-211ENST00000533487 XIRP1Q702N8 1843 aaKnown RBP30.35■■■□□ 2.45
VPS51-211ENST00000533487 PROSER2Q86WR7 435 aaPredicted RBP30.34■■■□□ 2.45
VPS51-211ENST00000533487 AMOTL2Q9Y2J4 779 aa30.34■■■□□ 2.45
VPS51-211ENST00000533487 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
VPS51-211ENST00000533487 C14orf93Q9H972 538 aaKnown RBP30.33■■■□□ 2.45
VPS51-211ENST00000533487 TMEM94Q12767 1356 aa30.3■■■□□ 2.44
VPS51-211ENST00000533487 PTCH1Q13635 1447 aa30.3■■■□□ 2.44
VPS51-211ENST00000533487 SIN3AQ96ST3 1273 aa30.28■■■□□ 2.44
VPS51-211ENST00000533487 KIAA1210Q9ULL0 1709 aa30.27■■■□□ 2.44
VPS51-211ENST00000533487 KNDC1Q76NI1 1749 aa30.27■■■□□ 2.44
VPS51-211ENST00000533487 KDM2AQ9Y2K7 1162 aa30.26■■■□□ 2.43
VPS51-211ENST00000533487 TECPR2O15040 1411 aa30.25■■■□□ 2.43
VPS51-211ENST00000533487 TOM1O60784 492 aa30.25■■■□□ 2.43
VPS51-211ENST00000533487 LRPPRCP42704 1394 aaKnown RBP30.24■■■□□ 2.43
VPS51-211ENST00000533487 NEUROD1Q13562 356 aa30.23■■■□□ 2.43
VPS51-211ENST00000533487 ABCC11Q96J66 1382 aa30.23■■■□□ 2.43
VPS51-211ENST00000533487 MSH6P52701 1360 aa30.22■■■□□ 2.43
VPS51-211ENST00000533487 ASXL1Q8IXJ9 1541 aa30.22■■■□□ 2.43
VPS51-211ENST00000533487 L3MBTL2Q969R5 705 aa30.21■■■□□ 2.43
VPS51-211ENST00000533487 UBAP1LF5GYI3 381 aa30.2■■■□□ 2.43
VPS51-211ENST00000533487 CFAP70Q5T0N1 1121 aa30.2■■■□□ 2.43
VPS51-211ENST00000533487 SIRT1Q96EB6 747 aa30.2■■■□□ 2.43
VPS51-211ENST00000533487 YTHDC2Q9H6S0 1430 aaKnown RBP30.2■■■□□ 2.42
VPS51-211ENST00000533487 TONSLQ96HA7 1378 aa30.17■■■□□ 2.42
VPS51-211ENST00000533487 ADGRB1O14514 1584 aa30.17■■■□□ 2.42
VPS51-211ENST00000533487 DCCP43146 1447 aa30.17■■■□□ 2.42
VPS51-211ENST00000533487 C19orf44Q9H6X5 657 aa30.17■■■□□ 2.42
VPS51-211ENST00000533487 FAM135BQ49AJ0 1406 aa30.15■■■□□ 2.42
VPS51-211ENST00000533487 DLC1Q96QB1 1528 aa30.14■■■□□ 2.42
VPS51-211ENST00000533487 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.41
VPS51-211ENST00000533487 TMEM132EQ6IEE7 984 aa30.13■■■□□ 2.41
VPS51-211ENST00000533487 C14orf37Q86TY3 774 aa30.13■■■□□ 2.41
VPS51-211ENST00000533487 TIMELESSQ9UNS1 1208 aa30.13■■■□□ 2.41
VPS51-211ENST00000533487 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.13■■■□□ 2.41
VPS51-211ENST00000533487 ADGRL3Q9HAR2 1447 aa30.13■■■□□ 2.41
VPS51-211ENST00000533487 CADPS2Q86UW7 1296 aa30.11■■■□□ 2.41
VPS51-211ENST00000533487 NALCNQ8IZF0 1738 aa30.08■■■□□ 2.41
VPS51-211ENST00000533487 ILDR1Q86SU0 546 aaPredicted RBP30.08■■■□□ 2.41
VPS51-211ENST00000533487 ATF3P18847 181 aa30.07■■■□□ 2.4
VPS51-211ENST00000533487 RBM33Q96EV2 1170 aaKnown RBP30.07■■■□□ 2.4
VPS51-211ENST00000533487 STK26Q9P289 416 aa30.07■■■□□ 2.4
VPS51-211ENST00000533487 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
VPS51-211ENST00000533487 CCER1Q8TC90 406 aaPredicted RBP30.05■■■□□ 2.4
VPS51-211ENST00000533487 CDC42BPGQ6DT37 1551 aa30.01■■■□□ 2.39
VPS51-211ENST00000533487 SLAIN2Q9P270 581 aa30■■■□□ 2.39
VPS51-211ENST00000533487 ARHGEF28Q8N1W1 1705 aaKnown RBP29.99■■■□□ 2.39
VPS51-211ENST00000533487 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
VPS51-211ENST00000533487 WAPLQ7Z5K2 1190 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms