RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 LRP6O75581 1613 aa12.39□□□□□ -0.43
NXF1-215ENST00000533440 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
NXF1-215ENST00000533440 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
NXF1-215ENST00000533440 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
NXF1-215ENST00000533440 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
NXF1-215ENST00000533440 CHD2O14647 1828 aaKnown RBP12.37□□□□□ -0.43
NXF1-215ENST00000533440 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
NXF1-215ENST00000533440 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
NXF1-215ENST00000533440 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
NXF1-215ENST00000533440 DAPK1P53355 1430 aa12.36□□□□□ -0.43
NXF1-215ENST00000533440 AHDC1Q5TGY3 1603 aaPredicted RBP12.34□□□□□ -0.43
NXF1-215ENST00000533440 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
NXF1-215ENST00000533440 BCANQ96GW7 911 aa12.34□□□□□ -0.43
NXF1-215ENST00000533440 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
NXF1-215ENST00000533440 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.43
NXF1-215ENST00000533440 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
NXF1-215ENST00000533440 SRCAPQ6ZRS2 3230 aa12.33□□□□□ -0.44
NXF1-215ENST00000533440 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
NXF1-215ENST00000533440 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
NXF1-215ENST00000533440 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
NXF1-215ENST00000533440 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
NXF1-215ENST00000533440 RXRBP28702 533 aa12.32□□□□□ -0.44
NXF1-215ENST00000533440 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
NXF1-215ENST00000533440 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
NXF1-215ENST00000533440 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
NXF1-215ENST00000533440 C19orf44Q9H6X5 657 aa12.31□□□□□ -0.44
NXF1-215ENST00000533440 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
NXF1-215ENST00000533440 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
NXF1-215ENST00000533440 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
NXF1-215ENST00000533440 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
NXF1-215ENST00000533440 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
NXF1-215ENST00000533440 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
NXF1-215ENST00000533440 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
NXF1-215ENST00000533440 PIK3R4Q99570 1358 aa12.29□□□□□ -0.44
NXF1-215ENST00000533440 ATF3P18847 181 aa12.28□□□□□ -0.44
NXF1-215ENST00000533440 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
NXF1-215ENST00000533440 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
NXF1-215ENST00000533440 ADGRL2O95490 1459 aa12.27□□□□□ -0.44
NXF1-215ENST00000533440 ADRA2BP18089 450 aa12.27□□□□□ -0.45
NXF1-215ENST00000533440 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
NXF1-215ENST00000533440 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.45
NXF1-215ENST00000533440 AFF2P51816 1311 aa12.26□□□□□ -0.45
NXF1-215ENST00000533440 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
NXF1-215ENST00000533440 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
NXF1-215ENST00000533440 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
NXF1-215ENST00000533440 DCCP43146 1447 aa12.24□□□□□ -0.45
NXF1-215ENST00000533440 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
NXF1-215ENST00000533440 RGS12O14924 1447 aa12.23□□□□□ -0.45
NXF1-215ENST00000533440 PTPRUQ92729 1446 aa12.23□□□□□ -0.45
NXF1-215ENST00000533440 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
NXF1-215ENST00000533440 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
NXF1-215ENST00000533440 TRPM2O94759 1503 aa12.22□□□□□ -0.45
NXF1-215ENST00000533440 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
NXF1-215ENST00000533440 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
NXF1-215ENST00000533440 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
NXF1-215ENST00000533440 MST1RQ04912 1400 aa12.21□□□□□ -0.45
NXF1-215ENST00000533440 LOC105371045A0A1W2PR82 267 aa12.21□□□□□ -0.45
NXF1-215ENST00000533440 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
NXF1-215ENST00000533440 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
NXF1-215ENST00000533440 LRRC59Q96AG4 307 aaKnown RBP12.21□□□□□ -0.45
NXF1-215ENST00000533440 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
NXF1-215ENST00000533440 UNC13BO14795 1591 aa12.19□□□□□ -0.46
NXF1-215ENST00000533440 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
NXF1-215ENST00000533440 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
NXF1-215ENST00000533440 APLP2Q06481 763 aa12.18□□□□□ -0.46
NXF1-215ENST00000533440 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
NXF1-215ENST00000533440 E9PCH4 1651 aa12.18□□□□□ -0.46
NXF1-215ENST00000533440 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
NXF1-215ENST00000533440 SETBP1Q9Y6X0 1596 aa12.16□□□□□ -0.46
NXF1-215ENST00000533440 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
NXF1-215ENST00000533440 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
NXF1-215ENST00000533440 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
NXF1-215ENST00000533440 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
NXF1-215ENST00000533440 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
NXF1-215ENST00000533440 EP400Q96L91 3159 aa12.14□□□□□ -0.47
NXF1-215ENST00000533440 LAMC1P11047 1609 aa12.13□□□□□ -0.47
NXF1-215ENST00000533440 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
NXF1-215ENST00000533440 METP08581 1390 aa12.13□□□□□ -0.47
NXF1-215ENST00000533440 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
NXF1-215ENST00000533440 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
NXF1-215ENST00000533440 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
NXF1-215ENST00000533440 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
NXF1-215ENST00000533440 USP21Q9UK80 565 aa12.11□□□□□ -0.47
NXF1-215ENST00000533440 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
NXF1-215ENST00000533440 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
NXF1-215ENST00000533440 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
NXF1-215ENST00000533440 ROCK1Q13464 1354 aa12.1□□□□□ -0.47
NXF1-215ENST00000533440 ATRNO75882 1429 aa12.1□□□□□ -0.47
NXF1-215ENST00000533440 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
NXF1-215ENST00000533440 NUP155O75694 1391 aa12.08□□□□□ -0.48
NXF1-215ENST00000533440 CCDC125Q86Z20 511 aa12.08□□□□□ -0.48
NXF1-215ENST00000533440 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
NXF1-215ENST00000533440 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
NXF1-215ENST00000533440 COL22A1Q8NFW1 1626 aaPredicted RBP12.06□□□□□ -0.48
NXF1-215ENST00000533440 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
NXF1-215ENST00000533440 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
NXF1-215ENST00000533440 MYOM2P54296 1465 aa12.05□□□□□ -0.48
NXF1-215ENST00000533440 BCL9LQ86UU0 1499 aa12.05□□□□□ -0.48
NXF1-215ENST00000533440 SPHKAPQ2M3C7 1700 aa12.05□□□□□ -0.48
NXF1-215ENST00000533440 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms