RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 BCANQ96GW7 911 aa18.28■□□□□ 0.52
SF3B2-213ENST00000533421 TOM1O60784 492 aa18.27■□□□□ 0.52
SF3B2-213ENST00000533421 RIMS2Q9UQ26 1411 aa18.26■□□□□ 0.51
SF3B2-213ENST00000533421 MYO5BQ9ULV0 1848 aa18.25■□□□□ 0.51
SF3B2-213ENST00000533421 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
SF3B2-213ENST00000533421 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
SF3B2-213ENST00000533421 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
SF3B2-213ENST00000533421 TRPM2O94759 1503 aa18.21■□□□□ 0.51
SF3B2-213ENST00000533421 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
SF3B2-213ENST00000533421 KCNA6P17658 529 aa18.2■□□□□ 0.5
SF3B2-213ENST00000533421 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
SF3B2-213ENST00000533421 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
SF3B2-213ENST00000533421 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
SF3B2-213ENST00000533421 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
SF3B2-213ENST00000533421 SOCS7O14512 581 aa18.18■□□□□ 0.5
SF3B2-213ENST00000533421 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
SF3B2-213ENST00000533421 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
SF3B2-213ENST00000533421 KIF1BO60333 1816 aa18.17■□□□□ 0.5
SF3B2-213ENST00000533421 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
SF3B2-213ENST00000533421 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
SF3B2-213ENST00000533421 CLTCL1P53675 1640 aa18.14■□□□□ 0.49
SF3B2-213ENST00000533421 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
SF3B2-213ENST00000533421 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
SF3B2-213ENST00000533421 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
SF3B2-213ENST00000533421 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-213ENST00000533421 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
SF3B2-213ENST00000533421 ALKQ9UM73 1620 aa18.12■□□□□ 0.49
SF3B2-213ENST00000533421 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
SF3B2-213ENST00000533421 TMEM94Q12767 1356 aa18.11■□□□□ 0.49
SF3B2-213ENST00000533421 CHD2O14647 1828 aaKnown RBP18.11■□□□□ 0.49
SF3B2-213ENST00000533421 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
SF3B2-213ENST00000533421 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-213ENST00000533421 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
SF3B2-213ENST00000533421 CCDC144AA2RUR9 1427 aa18.08■□□□□ 0.49
SF3B2-213ENST00000533421 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.49
SF3B2-213ENST00000533421 MSH6P52701 1360 aa18.08■□□□□ 0.49
SF3B2-213ENST00000533421 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-213ENST00000533421 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-213ENST00000533421 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.48
SF3B2-213ENST00000533421 NCOA3Q9Y6Q9 1424 aa18.07■□□□□ 0.48
SF3B2-213ENST00000533421 MED1Q15648 1581 aaPredicted RBP18.07■□□□□ 0.48
SF3B2-213ENST00000533421 XIRP1Q702N8 1843 aaKnown RBP18.07■□□□□ 0.48
SF3B2-213ENST00000533421 FOXD1Q16676 465 aa18.06■□□□□ 0.48
SF3B2-213ENST00000533421 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
SF3B2-213ENST00000533421 C14orf37Q86TY3 774 aa18.04■□□□□ 0.48
SF3B2-213ENST00000533421 HSPA1LP34931 641 aa18.02■□□□□ 0.48
SF3B2-213ENST00000533421 HRCP23327 699 aa18.01■□□□□ 0.47
SF3B2-213ENST00000533421 AMOTL2Q9Y2J4 779 aa18.01■□□□□ 0.47
SF3B2-213ENST00000533421 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
SF3B2-213ENST00000533421 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
SF3B2-213ENST00000533421 PPLO60437 1756 aa17.99■□□□□ 0.47
SF3B2-213ENST00000533421 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
SF3B2-213ENST00000533421 ATF3P18847 181 aa17.97■□□□□ 0.47
SF3B2-213ENST00000533421 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
SF3B2-213ENST00000533421 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
SF3B2-213ENST00000533421 C19orf44Q9H6X5 657 aa17.97■□□□□ 0.47
SF3B2-213ENST00000533421 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
SF3B2-213ENST00000533421 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
SF3B2-213ENST00000533421 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
SF3B2-213ENST00000533421 PTPRUQ92729 1446 aa17.95■□□□□ 0.46
SF3B2-213ENST00000533421 METP08581 1390 aa17.94■□□□□ 0.46
SF3B2-213ENST00000533421 RGL3Q3MIN7 710 aa17.94■□□□□ 0.46
SF3B2-213ENST00000533421 DCCP43146 1447 aa17.94■□□□□ 0.46
SF3B2-213ENST00000533421 SPATA31E1Q6ZUB1 1445 aa17.94■□□□□ 0.46
SF3B2-213ENST00000533421 ROBO1Q9Y6N7 1651 aa17.93■□□□□ 0.46
SF3B2-213ENST00000533421 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
SF3B2-213ENST00000533421 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
SF3B2-213ENST00000533421 IFT172Q9UG01 1749 aa17.89■□□□□ 0.46
SF3B2-213ENST00000533421 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
SF3B2-213ENST00000533421 PRAG1Q86YV5 1406 aa17.88■□□□□ 0.45
SF3B2-213ENST00000533421 ADGRL3Q9HAR2 1447 aa17.88■□□□□ 0.45
SF3B2-213ENST00000533421 ADGRF5Q8IZF2 1346 aa17.86■□□□□ 0.45
SF3B2-213ENST00000533421 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
SF3B2-213ENST00000533421 PHLPP1O60346 1717 aa17.84■□□□□ 0.45
SF3B2-213ENST00000533421 LAMC1P11047 1609 aa17.84■□□□□ 0.45
SF3B2-213ENST00000533421 MYOM2P54296 1465 aa17.84■□□□□ 0.45
SF3B2-213ENST00000533421 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
SF3B2-213ENST00000533421 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SF3B2-213ENST00000533421 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
SF3B2-213ENST00000533421 ROBO2Q9HCK4 1378 aa17.8■□□□□ 0.44
SF3B2-213ENST00000533421 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
SF3B2-213ENST00000533421 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
SF3B2-213ENST00000533421 JCADQ9P266 1359 aa17.79■□□□□ 0.44
SF3B2-213ENST00000533421 NRXN1Q9ULB1 1477 aa17.79■□□□□ 0.44
SF3B2-213ENST00000533421 TECPR2O15040 1411 aa17.79■□□□□ 0.44
SF3B2-213ENST00000533421 MST1RQ04912 1400 aa17.79■□□□□ 0.44
SF3B2-213ENST00000533421 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
SF3B2-213ENST00000533421 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
SF3B2-213ENST00000533421 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
SF3B2-213ENST00000533421 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SF3B2-213ENST00000533421 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
SF3B2-213ENST00000533421 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.43
SF3B2-213ENST00000533421 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
SF3B2-213ENST00000533421 STK26Q9P289 416 aa17.76■□□□□ 0.43
SF3B2-213ENST00000533421 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-213ENST00000533421 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
SF3B2-213ENST00000533421 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
SF3B2-213ENST00000533421 CDC42BPGQ6DT37 1551 aa17.74■□□□□ 0.43
SF3B2-213ENST00000533421 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
SF3B2-213ENST00000533421 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms