RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	LTBP4	Q8N2S1	1624 aa		33.04	■■■□□ 2.88
SIPA1-208	ENST00000533361	DISP3	Q9P2K9	1392 aa		33.04	■■■□□ 2.88
SIPA1-208	ENST00000533361	RIMS2	Q9UQ26	1411 aa		33.02	■■■□□ 2.88
SIPA1-208	ENST00000533361	ZNF326	Q5BKZ1	582 aa	Known RBP	33.01	■■■□□ 2.87
SIPA1-208	ENST00000533361	SENP3	Q9H4L4	574 aa	Predicted RBP	33.01	■■■□□ 2.87
SIPA1-208	ENST00000533361	TRPM2	O94759	1503 aa		33.01	■■■□□ 2.87
SIPA1-208	ENST00000533361	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33	■■■□□ 2.87
SIPA1-208	ENST00000533361	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.99	■■■□□ 2.87
SIPA1-208	ENST00000533361	ILDR2	Q71H61	639 aa		32.99	■■■□□ 2.87
SIPA1-208	ENST00000533361	CLTCL1	P53675	1640 aa		32.96	■■■□□ 2.87
SIPA1-208	ENST00000533361	ZFYVE9	O95405	1425 aa		32.95	■■■□□ 2.87
SIPA1-208	ENST00000533361	SLC26A8	Q96RN1	970 aa		32.94	■■■□□ 2.86
SIPA1-208	ENST00000533361	IQSEC2	Q5JU85	1478 aa		32.93	■■■□□ 2.86
SIPA1-208	ENST00000533361	HRC	P23327	699 aa		32.9	■■■□□ 2.86
SIPA1-208	ENST00000533361	KIF1B	O60333	1816 aa		32.89	■■■□□ 2.86
SIPA1-208	ENST00000533361	PLEKHG1	Q9ULL1	1385 aa		32.88	■■■□□ 2.85
SIPA1-208	ENST00000533361	CPS1	P31327	1500 aa		32.87	■■■□□ 2.85
SIPA1-208	ENST00000533361	CCDC144A	A2RUR9	1427 aa		32.85	■■■□□ 2.85
SIPA1-208	ENST00000533361	SOCS7	O14512	581 aa		32.83	■■■□□ 2.85
SIPA1-208	ENST00000533361	KCNA6	P17658	529 aa		32.77	■■■□□ 2.84
SIPA1-208	ENST00000533361	TBX22	Q9Y458	520 aa		32.77	■■■□□ 2.84
SIPA1-208	ENST00000533361	STRCP1	A6NGW2	1772 aa		32.77	■■■□□ 2.84
SIPA1-208	ENST00000533361	RGL3	Q3MIN7	710 aa		32.76	■■■□□ 2.83
SIPA1-208	ENST00000533361	RPGRIP1L	Q68CZ1	1315 aa		32.75	■■■□□ 2.83
SIPA1-208	ENST00000533361	UBAP1L	F5GYI3	381 aa		32.74	■■■□□ 2.83
SIPA1-208	ENST00000533361	NEXMIF	Q5QGS0	1516 aa		32.73	■■■□□ 2.83
SIPA1-208	ENST00000533361	VGF	O15240	615 aa	Predicted RBP	32.72	■■■□□ 2.83
SIPA1-208	ENST00000533361	TRIM26	Q12899	539 aa	Predicted RBP	32.71	■■■□□ 2.83
SIPA1-208	ENST00000533361	LRRC7	Q96NW7	1537 aa		32.71	■■■□□ 2.83
SIPA1-208	ENST00000533361	ADAMTS13	Q76LX8	1427 aa		32.7	■■■□□ 2.83
SIPA1-208	ENST00000533361	PROSER2	Q86WR7	435 aa	Predicted RBP	32.69	■■■□□ 2.82
SIPA1-208	ENST00000533361	DIP2A	Q14689	1571 aa		32.66	■■■□□ 2.82
SIPA1-208	ENST00000533361	SPATA31E1	Q6ZUB1	1445 aa		32.64	■■■□□ 2.82
SIPA1-208	ENST00000533361	ANKRD30B	Q9BXX2	1392 aa		32.64	■■■□□ 2.82
SIPA1-208	ENST00000533361	TOM1	O60784	492 aa		32.63	■■■□□ 2.81
SIPA1-208	ENST00000533361	SETBP1	Q9Y6X0	1596 aa		32.62	■■■□□ 2.81
SIPA1-208	ENST00000533361	RBM33	Q96EV2	1170 aa	Known RBP	32.61	■■■□□ 2.81
SIPA1-208	ENST00000533361	CHD2	O14647	1828 aa	Known RBP	32.61	■■■□□ 2.81
SIPA1-208	ENST00000533361	PIK3R4	Q99570	1358 aa		32.6	■■■□□ 2.81
SIPA1-208	ENST00000533361	SCAF1	Q9H7N4	1312 aa	Known RBP	32.6	■■■□□ 2.81
SIPA1-208	ENST00000533361	PPL	O60437	1756 aa		32.6	■■■□□ 2.81
SIPA1-208	ENST00000533361	TMEM94	Q12767	1356 aa		32.59	■■■□□ 2.81
SIPA1-208	ENST00000533361	NRXN3	Q9Y4C0	1643 aa		32.59	■■■□□ 2.81
SIPA1-208	ENST00000533361	NWD1	Q149M9	1564 aa		32.59	■■■□□ 2.81
SIPA1-208	ENST00000533361	AMOTL2	Q9Y2J4	779 aa		32.58	■■■□□ 2.81
SIPA1-208	ENST00000533361	NKTR	P30414	1462 aa	Known RBP	32.58	■■■□□ 2.81
SIPA1-208	ENST00000533361	PIP4K2B	P78356	416 aa		32.57	■■■□□ 2.8
SIPA1-208	ENST00000533361	ADGRF5	Q8IZF2	1346 aa		32.54	■■■□□ 2.8
SIPA1-208	ENST00000533361	MET	P08581	1390 aa		32.53	■■■□□ 2.8
SIPA1-208	ENST00000533361	PTPRU	Q92729	1446 aa		32.51	■■■□□ 2.8
SIPA1-208	ENST00000533361	C14orf37	Q86TY3	774 aa		32.51	■■■□□ 2.79
SIPA1-208	ENST00000533361	XIRP1	Q702N8	1843 aa	Known RBP	32.51	■■■□□ 2.79
SIPA1-208	ENST00000533361	IFT172	Q9UG01	1749 aa		32.47	■■■□□ 2.79
SIPA1-208	ENST00000533361	ALK	Q9UM73	1620 aa		32.47	■■■□□ 2.79
SIPA1-208	ENST00000533361	MSH6	P52701	1360 aa		32.45	■■■□□ 2.78
SIPA1-208	ENST00000533361	KDM2A	Q9Y2K7	1162 aa		32.43	■■■□□ 2.78
SIPA1-208	ENST00000533361	DCAF11	Q8TEB1	546 aa		32.41	■■■□□ 2.78
SIPA1-208	ENST00000533361	XRN1	Q8IZH2	1706 aa	Known RBP	32.39	■■■□□ 2.78
SIPA1-208	ENST00000533361	NCOA3	Q9Y6Q9	1424 aa		32.38	■■■□□ 2.77
SIPA1-208	ENST00000533361	HSPA1L	P34931	641 aa		32.38	■■■□□ 2.77
SIPA1-208	ENST00000533361	SETD1A	O15047	1707 aa	Known RBP	32.37	■■■□□ 2.77
SIPA1-208	ENST00000533361	PIK3C2G	O75747	1445 aa		32.36	■■■□□ 2.77
SIPA1-208	ENST00000533361	MYOM2	P54296	1465 aa		32.35	■■■□□ 2.77
SIPA1-208	ENST00000533361	TMEM132E	Q6IEE7	984 aa		32.34	■■■□□ 2.77
SIPA1-208	ENST00000533361	C19orf44	Q9H6X5	657 aa		32.34	■■■□□ 2.77
SIPA1-208	ENST00000533361	STK26	Q9P289	416 aa		32.34	■■■□□ 2.77
SIPA1-208	ENST00000533361	ATF3	P18847	181 aa		32.32	■■■□□ 2.76
SIPA1-208	ENST00000533361	CFAP70	Q5T0N1	1121 aa		32.32	■■■□□ 2.76
SIPA1-208	ENST00000533361	C14orf93	Q9H972	538 aa	Known RBP	32.32	■■■□□ 2.76
SIPA1-208	ENST00000533361	DHX57	Q6P158	1386 aa	Known RBP	32.31	■■■□□ 2.76
SIPA1-208	ENST00000533361	STAC3	Q96MF2	364 aa		32.3	■■■□□ 2.76
SIPA1-208	ENST00000533361	NRXN1	Q9ULB1	1477 aa		32.29	■■■□□ 2.76
SIPA1-208	ENST00000533361	SLAIN2	Q9P270	581 aa		32.29	■■■□□ 2.76
SIPA1-208	ENST00000533361	MED1	Q15648	1581 aa	Predicted RBP	32.28	■■■□□ 2.76
SIPA1-208	ENST00000533361	NEUROD1	Q13562	356 aa		32.28	■■■□□ 2.76
SIPA1-208	ENST00000533361	CADPS2	Q86UW7	1296 aa		32.28	■■■□□ 2.76
SIPA1-208	ENST00000533361	SIN3A	Q96ST3	1273 aa		32.28	■■■□□ 2.76
SIPA1-208	ENST00000533361	ROBO2	Q9HCK4	1378 aa		32.27	■■■□□ 2.76
SIPA1-208	ENST00000533361	PTCH1	Q13635	1447 aa		32.26	■■■□□ 2.75
SIPA1-208	ENST00000533361	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.25	■■■□□ 2.75
SIPA1-208	ENST00000533361	LRPPRC	P42704	1394 aa	Known RBP	32.24	■■■□□ 2.75
SIPA1-208	ENST00000533361	PCGF6	Q9BYE7	350 aa		32.23	■■■□□ 2.75
SIPA1-208	ENST00000533361	FAM135B	Q49AJ0	1406 aa		32.21	■■■□□ 2.75
SIPA1-208	ENST00000533361	LAMC1	P11047	1609 aa		32.21	■■■□□ 2.75
SIPA1-208	ENST00000533361	ASXL1	Q8IXJ9	1541 aa		32.21	■■■□□ 2.75
SIPA1-208	ENST00000533361	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.2	■■■□□ 2.75
SIPA1-208	ENST00000533361	ADGRL3	Q9HAR2	1447 aa		32.19	■■■□□ 2.74
SIPA1-208	ENST00000533361	ABCC11	Q96J66	1382 aa		32.19	■■■□□ 2.74
SIPA1-208	ENST00000533361	WAPL	Q7Z5K2	1190 aa		32.18	■■■□□ 2.74
SIPA1-208	ENST00000533361	PRAG1	Q86YV5	1406 aa		32.17	■■■□□ 2.74
SIPA1-208	ENST00000533361	DCC	P43146	1447 aa		32.16	■■■□□ 2.74
SIPA1-208	ENST00000533361	ROBO1	Q9Y6N7	1651 aa		32.15	■■■□□ 2.74
SIPA1-208	ENST00000533361	L3MBTL2	Q969R5	705 aa		32.14	■■■□□ 2.74
SIPA1-208	ENST00000533361	TECPR2	O15040	1411 aa		32.14	■■■□□ 2.74
SIPA1-208	ENST00000533361	NALCN	Q8IZF0	1738 aa		32.13	■■■□□ 2.73
SIPA1-208	ENST00000533361	KNDC1	Q76NI1	1749 aa		32.1	■■■□□ 2.73
SIPA1-208	ENST00000533361	SIRT1	Q96EB6	747 aa		32.09	■■■□□ 2.73
SIPA1-208	ENST00000533361	TRAK1	Q9UPV9	953 aa		32.09	■■■□□ 2.73
SIPA1-208	ENST00000533361	PLEKHH1	Q9ULM0	1364 aa		32.08	■■■□□ 2.73
SIPA1-208	ENST00000533361	POGK	Q9P215	609 aa		32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms