RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KIF15Q9NS87 1388 aa17.75■□□□□ 0.43
TRAPPC4-213ENST00000533149 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
TRAPPC4-213ENST00000533149 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
TRAPPC4-213ENST00000533149 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
TRAPPC4-213ENST00000533149 MYOM3Q5VTT5 1437 aa17.74■□□□□ 0.43
TRAPPC4-213ENST00000533149 AHDC1Q5TGY3 1603 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC4-213ENST00000533149 HDGFP51858 240 aaKnown RBP17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 SLC52A1Q9NWF4 448 aa17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 ADGRB3O60242 1522 aa17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 ATF3P18847 181 aa17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 FOXD1Q16676 465 aa17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 RRP7BPQ9NSQ0 103 aa17.72■□□□□ 0.43
TRAPPC4-213ENST00000533149 NUTM2BA6NNL0 878 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC4-213ENST00000533149 NUTM2EB1AL46 878 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC4-213ENST00000533149 NUTM2AQ8IVF1 878 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC4-213ENST00000533149 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.42
TRAPPC4-213ENST00000533149 PLEKHG1Q9ULL1 1385 aa17.7■□□□□ 0.42
TRAPPC4-213ENST00000533149 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
TRAPPC4-213ENST00000533149 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
TRAPPC4-213ENST00000533149 AFF2P51816 1311 aa17.69■□□□□ 0.42
TRAPPC4-213ENST00000533149 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC4-213ENST00000533149 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
TRAPPC4-213ENST00000533149 NOS1P29475 1434 aa17.68■□□□□ 0.42
TRAPPC4-213ENST00000533149 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
TRAPPC4-213ENST00000533149 NUTM2DQ5VT03 806 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC4-213ENST00000533149 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
TRAPPC4-213ENST00000533149 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
TRAPPC4-213ENST00000533149 RGS12O14924 1447 aa17.64■□□□□ 0.41
TRAPPC4-213ENST00000533149 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC4-213ENST00000533149 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
TRAPPC4-213ENST00000533149 DIP2AQ14689 1571 aa17.64■□□□□ 0.41
TRAPPC4-213ENST00000533149 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRAPPC4-213ENST00000533149 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
TRAPPC4-213ENST00000533149 ABCC5O15440 1437 aa17.62■□□□□ 0.41
TRAPPC4-213ENST00000533149 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
TRAPPC4-213ENST00000533149 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
TRAPPC4-213ENST00000533149 SETD5Q9C0A6 1442 aa17.62■□□□□ 0.41
TRAPPC4-213ENST00000533149 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
TRAPPC4-213ENST00000533149 LRRC59Q96AG4 307 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-213ENST00000533149 C8orf37Q96NL8 207 aa17.61■□□□□ 0.41
TRAPPC4-213ENST00000533149 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
TRAPPC4-213ENST00000533149 CROCC2H7BZ55 1655 aa17.59■□□□□ 0.41
TRAPPC4-213ENST00000533149 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-213ENST00000533149 ANKRD30AQ9BXX3 1397 aa17.58■□□□□ 0.4
TRAPPC4-213ENST00000533149 DCCP43146 1447 aa17.57■□□□□ 0.4
TRAPPC4-213ENST00000533149 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-213ENST00000533149 DAPK1P53355 1430 aa17.56■□□□□ 0.4
TRAPPC4-213ENST00000533149 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
TRAPPC4-213ENST00000533149 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
TRAPPC4-213ENST00000533149 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
TRAPPC4-213ENST00000533149 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
TRAPPC4-213ENST00000533149 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
TRAPPC4-213ENST00000533149 GCC2Q8IWJ2 1684 aa17.53■□□□□ 0.4
TRAPPC4-213ENST00000533149 SRCAPQ6ZRS2 3230 aa17.53■□□□□ 0.4
TRAPPC4-213ENST00000533149 MYO5BQ9ULV0 1848 aa17.53■□□□□ 0.4
TRAPPC4-213ENST00000533149 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.4
TRAPPC4-213ENST00000533149 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-213ENST00000533149 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
TRAPPC4-213ENST00000533149 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.39
TRAPPC4-213ENST00000533149 TRPM2O94759 1503 aa17.51■□□□□ 0.39
TRAPPC4-213ENST00000533149 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
TRAPPC4-213ENST00000533149 NHSL1Q5SYE7 1610 aa17.51■□□□□ 0.39
TRAPPC4-213ENST00000533149 MST1RQ04912 1400 aa17.5■□□□□ 0.39
TRAPPC4-213ENST00000533149 ADAMTS2O95450 1211 aa17.49■□□□□ 0.39
TRAPPC4-213ENST00000533149 TRPC5Q9UL62 973 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC4-213ENST00000533149 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
TRAPPC4-213ENST00000533149 USP21Q9UK80 565 aa17.48■□□□□ 0.39
TRAPPC4-213ENST00000533149 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
TRAPPC4-213ENST00000533149 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-213ENST00000533149 FNBP4Q8N3X1 1017 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-213ENST00000533149 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
TRAPPC4-213ENST00000533149 ADGRL2O95490 1459 aa17.42■□□□□ 0.38
TRAPPC4-213ENST00000533149 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
TRAPPC4-213ENST00000533149 XRN1Q8IZH2 1706 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-213ENST00000533149 UNC13BO14795 1591 aa17.4■□□□□ 0.38
TRAPPC4-213ENST00000533149 ATRNO75882 1429 aa17.4■□□□□ 0.38
TRAPPC4-213ENST00000533149 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
TRAPPC4-213ENST00000533149 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC4-213ENST00000533149 APLP2Q06481 763 aa17.38■□□□□ 0.37
TRAPPC4-213ENST00000533149 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
TRAPPC4-213ENST00000533149 LAMC1P11047 1609 aa17.35■□□□□ 0.37
TRAPPC4-213ENST00000533149 METP08581 1390 aa17.35■□□□□ 0.37
TRAPPC4-213ENST00000533149 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-213ENST00000533149 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-213ENST00000533149 E9PCH4 1651 aa17.33■□□□□ 0.36
TRAPPC4-213ENST00000533149 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.36
TRAPPC4-213ENST00000533149 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-213ENST00000533149 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
TRAPPC4-213ENST00000533149 LRP5O75197 1615 aa17.3■□□□□ 0.36
TRAPPC4-213ENST00000533149 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
TRAPPC4-213ENST00000533149 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
TRAPPC4-213ENST00000533149 COL22A1Q8NFW1 1626 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-213ENST00000533149 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
TRAPPC4-213ENST00000533149 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-213ENST00000533149 IQGAP3Q86VI3 1631 aa17.28■□□□□ 0.36
TRAPPC4-213ENST00000533149 MYOM2P54296 1465 aa17.27■□□□□ 0.35
TRAPPC4-213ENST00000533149 EP400Q96L91 3159 aa17.27■□□□□ 0.35
TRAPPC4-213ENST00000533149 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
TRAPPC4-213ENST00000533149 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
TRAPPC4-213ENST00000533149 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms