RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 KDM4FA0A1W2PPD8 638 aa21.18■□□□□ 0.98
NXF1-214ENST00000533048 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
NXF1-214ENST00000533048 TRPM1Q7Z4N2 1603 aa21.18■□□□□ 0.98
NXF1-214ENST00000533048 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
NXF1-214ENST00000533048 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
NXF1-214ENST00000533048 KIAA1210Q9ULL0 1709 aa21.17■□□□□ 0.98
NXF1-214ENST00000533048 SLIT1O75093 1534 aa21.15■□□□□ 0.98
NXF1-214ENST00000533048 ARHGAP23Q9P227 1491 aa21.15■□□□□ 0.98
NXF1-214ENST00000533048 PIK3C2GO75747 1445 aa21.14■□□□□ 0.98
NXF1-214ENST00000533048 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
NXF1-214ENST00000533048 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
NXF1-214ENST00000533048 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
NXF1-214ENST00000533048 RIMS2Q9UQ26 1411 aa21.12■□□□□ 0.97
NXF1-214ENST00000533048 TMEM2Q9UHN6 1383 aa21.12■□□□□ 0.97
NXF1-214ENST00000533048 LAMC1P11047 1609 aa21.12■□□□□ 0.97
NXF1-214ENST00000533048 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
NXF1-214ENST00000533048 VGFO15240 615 aaPredicted RBP21.1■□□□□ 0.97
NXF1-214ENST00000533048 ADGRF5Q8IZF2 1346 aa21.09■□□□□ 0.97
NXF1-214ENST00000533048 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
NXF1-214ENST00000533048 SETBP1Q9Y6X0 1596 aa21.07■□□□□ 0.96
NXF1-214ENST00000533048 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
NXF1-214ENST00000533048 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
NXF1-214ENST00000533048 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
NXF1-214ENST00000533048 HDGFP51858 240 aaKnown RBP21.04■□□□□ 0.96
NXF1-214ENST00000533048 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
NXF1-214ENST00000533048 ADGRB1O14514 1584 aa21.02■□□□□ 0.96
NXF1-214ENST00000533048 ROCK2O75116 1388 aaKnown RBP21.02■□□□□ 0.96
NXF1-214ENST00000533048 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
NXF1-214ENST00000533048 C14orf93Q9H972 538 aaKnown RBP21.01■□□□□ 0.95
NXF1-214ENST00000533048 PLEKHG1Q9ULL1 1385 aa21■□□□□ 0.95
NXF1-214ENST00000533048 IQGAP1P46940 1657 aa21■□□□□ 0.95
NXF1-214ENST00000533048 ALKQ9UM73 1620 aa21■□□□□ 0.95
NXF1-214ENST00000533048 ASXL1Q8IXJ9 1541 aa20.98■□□□□ 0.95
NXF1-214ENST00000533048 LTKP29376 864 aa20.97■□□□□ 0.95
NXF1-214ENST00000533048 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
NXF1-214ENST00000533048 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
NXF1-214ENST00000533048 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
NXF1-214ENST00000533048 LMTK3Q96Q04 1460 aa20.96■□□□□ 0.95
NXF1-214ENST00000533048 CFAP70Q5T0N1 1121 aa20.96■□□□□ 0.95
NXF1-214ENST00000533048 EID1Q9Y6B2 187 aa20.96■□□□□ 0.95
NXF1-214ENST00000533048 DIP2AQ14689 1571 aa20.96■□□□□ 0.95
NXF1-214ENST00000533048 MED14O60244 1454 aa20.95■□□□□ 0.94
NXF1-214ENST00000533048 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
NXF1-214ENST00000533048 USP47Q96K76 1375 aa20.95■□□□□ 0.94
NXF1-214ENST00000533048 TXNDC2Q86VQ3 553 aa20.94■□□□□ 0.94
NXF1-214ENST00000533048 ADAMTS13Q76LX8 1427 aa20.94■□□□□ 0.94
NXF1-214ENST00000533048 EIF4G2P78344 907 aaKnown RBP eCLIP20.93■□□□□ 0.94
NXF1-214ENST00000533048 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
NXF1-214ENST00000533048 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
NXF1-214ENST00000533048 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
NXF1-214ENST00000533048 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
NXF1-214ENST00000533048 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
NXF1-214ENST00000533048 YTHDC2Q9H6S0 1430 aaKnown RBP20.86■□□□□ 0.93
NXF1-214ENST00000533048 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
NXF1-214ENST00000533048 DLC1Q96QB1 1528 aa20.85■□□□□ 0.93
NXF1-214ENST00000533048 TECPR2O15040 1411 aa20.85■□□□□ 0.93
NXF1-214ENST00000533048 NPHP4O75161 1426 aaPredicted RBP20.85■□□□□ 0.93
NXF1-214ENST00000533048 METP08581 1390 aa20.85■□□□□ 0.93
NXF1-214ENST00000533048 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
NXF1-214ENST00000533048 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
NXF1-214ENST00000533048 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.93
NXF1-214ENST00000533048 PIK3R4Q99570 1358 aa20.83■□□□□ 0.92
NXF1-214ENST00000533048 CPS1P31327 1500 aa20.82■□□□□ 0.92
NXF1-214ENST00000533048 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
NXF1-214ENST00000533048 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
NXF1-214ENST00000533048 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
NXF1-214ENST00000533048 STRCQ7RTU9 1775 aa20.8■□□□□ 0.92
NXF1-214ENST00000533048 ST20-MTHFSA0A0A6YYL1 179 aa20.79■□□□□ 0.92
NXF1-214ENST00000533048 QRICH2Q9H0J4 1663 aa20.78■□□□□ 0.92
NXF1-214ENST00000533048 TESK2Q96S53 571 aa20.78■□□□□ 0.92
NXF1-214ENST00000533048 BCANQ96GW7 911 aa20.77■□□□□ 0.92
NXF1-214ENST00000533048 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
NXF1-214ENST00000533048 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.91
NXF1-214ENST00000533048 PTPRUQ92729 1446 aa20.77■□□□□ 0.91
NXF1-214ENST00000533048 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.91
NXF1-214ENST00000533048 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
NXF1-214ENST00000533048 HSPA2P54652 639 aa20.76■□□□□ 0.91
NXF1-214ENST00000533048 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
NXF1-214ENST00000533048 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
NXF1-214ENST00000533048 PTCH1Q13635 1447 aa20.76■□□□□ 0.91
NXF1-214ENST00000533048 SIRT1Q96EB6 747 aa20.75■□□□□ 0.91
NXF1-214ENST00000533048 TRAK1Q9UPV9 953 aa20.75■□□□□ 0.91
NXF1-214ENST00000533048 NWD1Q149M9 1564 aa20.75■□□□□ 0.91
NXF1-214ENST00000533048 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
NXF1-214ENST00000533048 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
NXF1-214ENST00000533048 STK26Q9P289 416 aa20.7■□□□□ 0.9
NXF1-214ENST00000533048 CCDC7Q96M83 1385 aa20.7■□□□□ 0.9
NXF1-214ENST00000533048 WASHC2AQ641Q2 1341 aa20.69■□□□□ 0.9
NXF1-214ENST00000533048 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
NXF1-214ENST00000533048 C11orf95C9JLR9 678 aaPredicted RBP20.68■□□□□ 0.9
NXF1-214ENST00000533048 DISP3Q9P2K9 1392 aa20.68■□□□□ 0.9
NXF1-214ENST00000533048 PRAM1Q96QH2 718 aa20.67■□□□□ 0.9
NXF1-214ENST00000533048 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
NXF1-214ENST00000533048 KIF7Q2M1P5 1343 aa20.67■□□□□ 0.9
NXF1-214ENST00000533048 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
NXF1-214ENST00000533048 TMF1P82094 1093 aa20.66■□□□□ 0.9
NXF1-214ENST00000533048 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
NXF1-214ENST00000533048 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
NXF1-214ENST00000533048 PLEKHH1Q9ULM0 1364 aa20.65■□□□□ 0.9
NXF1-214ENST00000533048 KCNA6P17658 529 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms