RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ZFYVE9O95405 1425 aa26.32■■□□□ 1.8
RPUSD4-207ENST00000532800 NWD1Q149M9 1564 aa26.32■■□□□ 1.8
RPUSD4-207ENST00000532800 KCNA6P17658 529 aa26.31■■□□□ 1.8
RPUSD4-207ENST00000532800 IQGAP3Q86VI3 1631 aa26.31■■□□□ 1.8
RPUSD4-207ENST00000532800 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
RPUSD4-207ENST00000532800 RBM33Q96EV2 1170 aaKnown RBP26.29■■□□□ 1.8
RPUSD4-207ENST00000532800 RIMS2Q9UQ26 1411 aa26.28■■□□□ 1.8
RPUSD4-207ENST00000532800 ITGAEP38570 1179 aa26.27■■□□□ 1.8
RPUSD4-207ENST00000532800 BCANQ96GW7 911 aa26.27■■□□□ 1.8
RPUSD4-207ENST00000532800 NKTRP30414 1462 aaKnown RBP26.26■■□□□ 1.79
RPUSD4-207ENST00000532800 PLEKHG1Q9ULL1 1385 aa26.25■■□□□ 1.79
RPUSD4-207ENST00000532800 PROSER2Q86WR7 435 aaPredicted RBP26.25■■□□□ 1.79
RPUSD4-207ENST00000532800 PHF23Q9BUL5 403 aaPredicted RBP26.23■■□□□ 1.79
RPUSD4-207ENST00000532800 PPP1R15AO75807 674 aaPredicted RBP26.22■■□□□ 1.79
RPUSD4-207ENST00000532800 CHGAP10645 457 aaKnown RBP26.22■■□□□ 1.79
RPUSD4-207ENST00000532800 CHD2O14647 1828 aaKnown RBP26.22■■□□□ 1.79
RPUSD4-207ENST00000532800 FAM135BQ49AJ0 1406 aa26.22■■□□□ 1.79
RPUSD4-207ENST00000532800 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
RPUSD4-207ENST00000532800 NUP155O75694 1391 aa26.2■■□□□ 1.79
RPUSD4-207ENST00000532800 NUTM2DQ5VT03 806 aaPredicted RBP26.18■■□□□ 1.78
RPUSD4-207ENST00000532800 HDGFP51858 240 aaKnown RBP26.15■■□□□ 1.78
RPUSD4-207ENST00000532800 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.78
RPUSD4-207ENST00000532800 MSH6P52701 1360 aa26.14■■□□□ 1.78
RPUSD4-207ENST00000532800 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.13■■□□□ 1.77
RPUSD4-207ENST00000532800 SPHKAPQ2M3C7 1700 aa26.12■■□□□ 1.77
RPUSD4-207ENST00000532800 DIP2AQ14689 1571 aa26.12■■□□□ 1.77
RPUSD4-207ENST00000532800 TBX22Q9Y458 520 aa26.11■■□□□ 1.77
RPUSD4-207ENST00000532800 RGS17Q9UGC6 210 aaPredicted RBP26.06■■□□□ 1.76
RPUSD4-207ENST00000532800 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
RPUSD4-207ENST00000532800 PHLPP1O60346 1717 aa26.05■■□□□ 1.76
RPUSD4-207ENST00000532800 SLAIN2Q9P270 581 aa26.05■■□□□ 1.76
RPUSD4-207ENST00000532800 TRPM2O94759 1503 aa26.04■■□□□ 1.76
RPUSD4-207ENST00000532800 NRXN3Q9Y4C0 1643 aa26.03■■□□□ 1.76
RPUSD4-207ENST00000532800 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
RPUSD4-207ENST00000532800 PTPRUQ92729 1446 aa26.02■■□□□ 1.76
RPUSD4-207ENST00000532800 NCOA3Q9Y6Q9 1424 aa26.02■■□□□ 1.76
RPUSD4-207ENST00000532800 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.02■■□□□ 1.76
RPUSD4-207ENST00000532800 CLTCL1P53675 1640 aa26■■□□□ 1.75
RPUSD4-207ENST00000532800 C14orf37Q86TY3 774 aa26■■□□□ 1.75
RPUSD4-207ENST00000532800 NAIPQ13075 1403 aa25.99■■□□□ 1.75
RPUSD4-207ENST00000532800 SETBP1Q9Y6X0 1596 aa25.99■■□□□ 1.75
RPUSD4-207ENST00000532800 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
RPUSD4-207ENST00000532800 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
RPUSD4-207ENST00000532800 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
RPUSD4-207ENST00000532800 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
RPUSD4-207ENST00000532800 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
RPUSD4-207ENST00000532800 C19orf44Q9H6X5 657 aa25.93■■□□□ 1.74
RPUSD4-207ENST00000532800 JCADQ9P266 1359 aa25.93■■□□□ 1.74
RPUSD4-207ENST00000532800 POTEAQ6S8J7 498 aa25.91■■□□□ 1.74
RPUSD4-207ENST00000532800 CADPS2Q86UW7 1296 aa25.91■■□□□ 1.74
RPUSD4-207ENST00000532800 KIF1BO60333 1816 aa25.91■■□□□ 1.74
RPUSD4-207ENST00000532800 AHDC1Q5TGY3 1603 aaPredicted RBP25.9■■□□□ 1.74
RPUSD4-207ENST00000532800 ATF3P18847 181 aa25.9■■□□□ 1.74
RPUSD4-207ENST00000532800 METP08581 1390 aa25.9■■□□□ 1.74
RPUSD4-207ENST00000532800 HFM1A2PYH4 1435 aa25.87■■□□□ 1.73
RPUSD4-207ENST00000532800 DCCP43146 1447 aa25.85■■□□□ 1.73
RPUSD4-207ENST00000532800 LRP6O75581 1613 aa25.85■■□□□ 1.73
RPUSD4-207ENST00000532800 BRINP3Q76B58 766 aa25.83■■□□□ 1.73
RPUSD4-207ENST00000532800 TRIM52Q96A61 297 aa25.83■■□□□ 1.73
RPUSD4-207ENST00000532800 SHPRHQ149N8 1683 aa25.82■■□□□ 1.72
RPUSD4-207ENST00000532800 NALCNQ8IZF0 1738 aa25.81■■□□□ 1.72
RPUSD4-207ENST00000532800 MST1RQ04912 1400 aa25.8■■□□□ 1.72
RPUSD4-207ENST00000532800 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
RPUSD4-207ENST00000532800 ASXL1Q8IXJ9 1541 aa25.8■■□□□ 1.72
RPUSD4-207ENST00000532800 ADGRL3Q9HAR2 1447 aa25.78■■□□□ 1.72
RPUSD4-207ENST00000532800 SPATA31A6Q5VVP1 1343 aa25.77■■□□□ 1.72
RPUSD4-207ENST00000532800 NHSL1Q5SYE7 1610 aa25.77■■□□□ 1.72
RPUSD4-207ENST00000532800 SLC4A1APQ9BWU0 796 aaKnown RBP25.76■■□□□ 1.71
RPUSD4-207ENST00000532800 PPLO60437 1756 aa25.74■■□□□ 1.71
RPUSD4-207ENST00000532800 MEX3CQ5U5Q3 659 aaKnown RBP25.72■■□□□ 1.71
RPUSD4-207ENST00000532800 PTCH1Q13635 1447 aa25.71■■□□□ 1.71
RPUSD4-207ENST00000532800 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
RPUSD4-207ENST00000532800 FOXD1Q16676 465 aa25.7■■□□□ 1.7
RPUSD4-207ENST00000532800 SETD5Q9C0A6 1442 aa25.69■■□□□ 1.7
RPUSD4-207ENST00000532800 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
RPUSD4-207ENST00000532800 DDX17Q92841 729 aaKnown RBP25.68■■□□□ 1.7
RPUSD4-207ENST00000532800 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
RPUSD4-207ENST00000532800 NUTM2BA6NNL0 878 aaPredicted RBP25.66■■□□□ 1.7
RPUSD4-207ENST00000532800 NUTM2EB1AL46 878 aaPredicted RBP25.66■■□□□ 1.7
RPUSD4-207ENST00000532800 NUTM2AQ8IVF1 878 aaPredicted RBP25.66■■□□□ 1.7
RPUSD4-207ENST00000532800 C1orf167Q5SNV9 1468 aa25.65■■□□□ 1.7
RPUSD4-207ENST00000532800 PRAG1Q86YV5 1406 aa25.64■■□□□ 1.7
RPUSD4-207ENST00000532800 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
RPUSD4-207ENST00000532800 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
RPUSD4-207ENST00000532800 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
RPUSD4-207ENST00000532800 PNPLA6Q8IY17 1366 aa25.59■■□□□ 1.69
RPUSD4-207ENST00000532800 LRRC59Q96AG4 307 aaKnown RBP25.59■■□□□ 1.69
RPUSD4-207ENST00000532800 LAMC1P11047 1609 aa25.59■■□□□ 1.69
RPUSD4-207ENST00000532800 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.69
RPUSD4-207ENST00000532800 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
RPUSD4-207ENST00000532800 RGL3Q3MIN7 710 aa25.56■■□□□ 1.68
RPUSD4-207ENST00000532800 ORAI2Q96SN7 254 aa25.56■■□□□ 1.68
RPUSD4-207ENST00000532800 MPHOSPH9Q99550 1183 aa25.56■■□□□ 1.68
RPUSD4-207ENST00000532800 AFF2P51816 1311 aa25.55■■□□□ 1.68
RPUSD4-207ENST00000532800 CDC42BPGQ6DT37 1551 aa25.52■■□□□ 1.68
RPUSD4-207ENST00000532800 RXRBP28702 533 aa25.5■■□□□ 1.67
RPUSD4-207ENST00000532800 SOS2Q07890 1332 aaPredicted RBP25.5■■□□□ 1.67
RPUSD4-207ENST00000532800 C8orf37Q96NL8 207 aa25.5■■□□□ 1.67
RPUSD4-207ENST00000532800 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
RPUSD4-207ENST00000532800 STK26Q9P289 416 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms