RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
CDC27-208ENST00000532575 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
CDC27-208ENST00000532575 MADDQ8WXG6 1647 aa13.74□□□□□ -0.21
CDC27-208ENST00000532575 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
CDC27-208ENST00000532575 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
CDC27-208ENST00000532575 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
CDC27-208ENST00000532575 ARHGEF40Q8TER5 1519 aa13.73□□□□□ -0.21
CDC27-208ENST00000532575 CFAP74Q9C0B2 1584 aa13.72□□□□□ -0.21
CDC27-208ENST00000532575 MAGI2Q86UL8 1455 aa13.72□□□□□ -0.21
CDC27-208ENST00000532575 MAP3K9P80192 1104 aa13.71□□□□□ -0.21
CDC27-208ENST00000532575 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
CDC27-208ENST00000532575 TBC1D12O60347 775 aa13.7□□□□□ -0.22
CDC27-208ENST00000532575 HSPA2P54652 639 aa13.7□□□□□ -0.22
CDC27-208ENST00000532575 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
CDC27-208ENST00000532575 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
CDC27-208ENST00000532575 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.225e-8■□□□□ 11.1
CDC27-208ENST00000532575 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
CDC27-208ENST00000532575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC27-208ENST00000532575 MLECQ14165 292 aa13.68□□□□□ -0.22
CDC27-208ENST00000532575 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
CDC27-208ENST00000532575 RICTORQ6R327 1708 aa13.67□□□□□ -0.22
CDC27-208ENST00000532575 RIMS1Q86UR5 1692 aaKnown RBP13.67□□□□□ -0.22
CDC27-208ENST00000532575 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
CDC27-208ENST00000532575 CDK11AQ9UQ88 783 aaPredicted RBP13.67□□□□□ -0.22
CDC27-208ENST00000532575 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
CDC27-208ENST00000532575 PLCH2O75038 1416 aa13.66□□□□□ -0.22
CDC27-208ENST00000532575 SCAPERQ9BY12 1400 aa13.66□□□□□ -0.22
CDC27-208ENST00000532575 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
CDC27-208ENST00000532575 ST18O60284 1047 aa13.66□□□□□ -0.22
CDC27-208ENST00000532575 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
CDC27-208ENST00000532575 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
CDC27-208ENST00000532575 EVI5O60447 810 aa13.64□□□□□ -0.23
CDC27-208ENST00000532575 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
CDC27-208ENST00000532575 PDIA6Q15084 440 aa13.64□□□□□ -0.23
CDC27-208ENST00000532575 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
CDC27-208ENST00000532575 ATP10AO60312 1499 aa13.63□□□□□ -0.23
CDC27-208ENST00000532575 NUDT7P0C024 238 aa13.63□□□□□ -0.23
CDC27-208ENST00000532575 HECW1Q76N89 1606 aa13.62□□□□□ -0.23
CDC27-208ENST00000532575 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
CDC27-208ENST00000532575 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
CDC27-208ENST00000532575 LCE2DQ5TA82 110 aaPredicted RBP13.61□□□□□ -0.23
CDC27-208ENST00000532575 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
CDC27-208ENST00000532575 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
CDC27-208ENST00000532575 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
CDC27-208ENST00000532575 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
CDC27-208ENST00000532575 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
CDC27-208ENST00000532575 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
CDC27-208ENST00000532575 ARHGEF12Q9NZN5 1544 aa13.57□□□□□ -0.24
CDC27-208ENST00000532575 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
CDC27-208ENST00000532575 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
CDC27-208ENST00000532575 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
CDC27-208ENST00000532575 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
CDC27-208ENST00000532575 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
CDC27-208ENST00000532575 SEMA3EO15041 775 aa13.55□□□□□ -0.24
CDC27-208ENST00000532575 NBR1Q14596 966 aa13.55□□□□□ -0.24
CDC27-208ENST00000532575 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
CDC27-208ENST00000532575 CLIP1P30622 1438 aa13.55□□□□□ -0.24
CDC27-208ENST00000532575 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
CDC27-208ENST00000532575 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
CDC27-208ENST00000532575 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
CDC27-208ENST00000532575 UHRF1BP1Q6BDS2 1440 aa13.54□□□□□ -0.24
CDC27-208ENST00000532575 LHX6Q9UPM6 363 aa13.53□□□□□ -0.24
CDC27-208ENST00000532575 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
CDC27-208ENST00000532575 PTGER2P43116 358 aa13.51□□□□□ -0.25
CDC27-208ENST00000532575 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
CDC27-208ENST00000532575 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
CDC27-208ENST00000532575 KIF14Q15058 1648 aa13.5□□□□□ -0.25
CDC27-208ENST00000532575 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
CDC27-208ENST00000532575 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
CDC27-208ENST00000532575 EMP3P54852 163 aa13.5□□□□□ -0.25
CDC27-208ENST00000532575 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
CDC27-208ENST00000532575 DDX12PQ92771 950 aa13.49□□□□□ -0.25
CDC27-208ENST00000532575 KDM5CP41229 1560 aa13.49□□□□□ -0.25
CDC27-208ENST00000532575 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
CDC27-208ENST00000532575 DISP3Q9P2K9 1392 aa13.48□□□□□ -0.25
CDC27-208ENST00000532575 BCANQ96GW7 911 aa13.48□□□□□ -0.25
CDC27-208ENST00000532575 PTPRTO14522 1441 aa13.47□□□□□ -0.25
CDC27-208ENST00000532575 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
CDC27-208ENST00000532575 REREQ9P2R6 1566 aa13.47□□□□□ -0.25
CDC27-208ENST00000532575 TRAPPC8Q9Y2L5 1435 aa13.47□□□□□ -0.25
CDC27-208ENST00000532575 GRXCR2A6NFK2 248 aa13.46□□□□□ -0.25
CDC27-208ENST00000532575 ERBB3P21860 1342 aa13.45□□□□□ -0.26
CDC27-208ENST00000532575 FOSBP53539 338 aa13.45□□□□□ -0.26
CDC27-208ENST00000532575 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
CDC27-208ENST00000532575 AGLP35573 1532 aa13.44□□□□□ -0.26
CDC27-208ENST00000532575 PHF14O94880 888 aa13.44□□□□□ -0.26
CDC27-208ENST00000532575 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
CDC27-208ENST00000532575 DIP2CQ9Y2E4 1556 aa13.44□□□□□ -0.26
CDC27-208ENST00000532575 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
CDC27-208ENST00000532575 SOCS7O14512 581 aa13.43□□□□□ -0.26
CDC27-208ENST00000532575 PCDHGA10Q9Y5H3 936 aa13.43□□□□□ -0.26
CDC27-208ENST00000532575 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
CDC27-208ENST00000532575 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
CDC27-208ENST00000532575 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
CDC27-208ENST00000532575 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
CDC27-208ENST00000532575 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
CDC27-208ENST00000532575 OSBPP22059 807 aa13.4□□□□□ -0.26
CDC27-208ENST00000532575 ILDR2Q71H61 639 aa13.4□□□□□ -0.26
CDC27-208ENST00000532575 ABCC1P33527 1531 aa13.39□□□□□ -0.27
CDC27-208ENST00000532575 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms