RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
NUP98-219ENST00000532475 ARHGAP31Q2M1Z3 1444 aa13.07□□□□□ -0.32
NUP98-219ENST00000532475 ROBO1Q9Y6N7 1651 aa13.07□□□□□ -0.32
NUP98-219ENST00000532475 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
NUP98-219ENST00000532475 JCADQ9P266 1359 aa13.07□□□□□ -0.32
NUP98-219ENST00000532475 SETD1AO15047 1707 aaKnown RBP13.06□□□□□ -0.32
NUP98-219ENST00000532475 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
NUP98-219ENST00000532475 CEP152O94986 1710 aa13.05□□□□□ -0.32
NUP98-219ENST00000532475 TET3O43151 1660 aa13.05□□□□□ -0.32
NUP98-219ENST00000532475 MSH6P52701 1360 aa13.04□□□□□ -0.32
NUP98-219ENST00000532475 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
NUP98-219ENST00000532475 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
NUP98-219ENST00000532475 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
NUP98-219ENST00000532475 MEX3CQ5U5Q3 659 aaKnown RBP13.03□□□□□ -0.32
NUP98-219ENST00000532475 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
NUP98-219ENST00000532475 PIK3C2BO00750 1634 aa13.02□□□□□ -0.32
NUP98-219ENST00000532475 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
NUP98-219ENST00000532475 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.33
NUP98-219ENST00000532475 LRP6O75581 1613 aa13.02□□□□□ -0.33
NUP98-219ENST00000532475 RXRBP28702 533 aa13.01□□□□□ -0.33
NUP98-219ENST00000532475 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
NUP98-219ENST00000532475 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
NUP98-219ENST00000532475 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
NUP98-219ENST00000532475 ABCC5O15440 1437 aa13□□□□□ -0.33
NUP98-219ENST00000532475 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
NUP98-219ENST00000532475 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
NUP98-219ENST00000532475 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
NUP98-219ENST00000532475 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
NUP98-219ENST00000532475 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
NUP98-219ENST00000532475 C14orf37Q86TY3 774 aa12.99□□□□□ -0.33
NUP98-219ENST00000532475 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
NUP98-219ENST00000532475 KANK1Q14678 1352 aa12.98□□□□□ -0.33
NUP98-219ENST00000532475 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
NUP98-219ENST00000532475 PHLPP1O60346 1717 aa12.98□□□□□ -0.33
NUP98-219ENST00000532475 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
NUP98-219ENST00000532475 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
NUP98-219ENST00000532475 NOS1P29475 1434 aa12.96□□□□□ -0.33
NUP98-219ENST00000532475 ERBINQ96RT1 1412 aa12.96□□□□□ -0.33
NUP98-219ENST00000532475 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.33
NUP98-219ENST00000532475 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
NUP98-219ENST00000532475 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
NUP98-219ENST00000532475 ATF3P18847 181 aa12.95□□□□□ -0.34
NUP98-219ENST00000532475 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
NUP98-219ENST00000532475 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
NUP98-219ENST00000532475 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
NUP98-219ENST00000532475 ARXQ96QS3 562 aa12.94□□□□□ -0.34
NUP98-219ENST00000532475 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
NUP98-219ENST00000532475 PLEKHG1Q9ULL1 1385 aa12.94□□□□□ -0.34
NUP98-219ENST00000532475 AFF2P51816 1311 aa12.93□□□□□ -0.34
NUP98-219ENST00000532475 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
NUP98-219ENST00000532475 ZFYVE9O95405 1425 aa12.92□□□□□ -0.34
NUP98-219ENST00000532475 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
NUP98-219ENST00000532475 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
NUP98-219ENST00000532475 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
NUP98-219ENST00000532475 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
NUP98-219ENST00000532475 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
NUP98-219ENST00000532475 RIMS2Q9UQ26 1411 aa12.91□□□□□ -0.34
NUP98-219ENST00000532475 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
NUP98-219ENST00000532475 DDX17Q92841 729 aaKnown RBP12.91□□□□□ -0.34
NUP98-219ENST00000532475 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
NUP98-219ENST00000532475 LMTK2Q8IWU2 1503 aa12.91□□□□□ -0.34
NUP98-219ENST00000532475 DAPK1P53355 1430 aa12.9□□□□□ -0.34
NUP98-219ENST00000532475 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
NUP98-219ENST00000532475 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
NUP98-219ENST00000532475 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
NUP98-219ENST00000532475 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
NUP98-219ENST00000532475 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
NUP98-219ENST00000532475 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
NUP98-219ENST00000532475 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
NUP98-219ENST00000532475 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
NUP98-219ENST00000532475 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
NUP98-219ENST00000532475 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.87□□□□□ -0.35
NUP98-219ENST00000532475 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
NUP98-219ENST00000532475 TULP1O00294 542 aaPredicted RBP12.86□□□□□ -0.35
NUP98-219ENST00000532475 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
NUP98-219ENST00000532475 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
NUP98-219ENST00000532475 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
NUP98-219ENST00000532475 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
NUP98-219ENST00000532475 RGS12O14924 1447 aa12.85□□□□□ -0.35
NUP98-219ENST00000532475 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
NUP98-219ENST00000532475 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
NUP98-219ENST00000532475 DIP2AQ14689 1571 aa12.84□□□□□ -0.35
NUP98-219ENST00000532475 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
NUP98-219ENST00000532475 SETD5Q9C0A6 1442 aa12.83□□□□□ -0.36
NUP98-219ENST00000532475 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
NUP98-219ENST00000532475 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
NUP98-219ENST00000532475 SHPRHQ149N8 1683 aa12.82□□□□□ -0.36
NUP98-219ENST00000532475 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
NUP98-219ENST00000532475 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
NUP98-219ENST00000532475 TMEM131LA2VDJ0 1609 aa12.81□□□□□ -0.36
NUP98-219ENST00000532475 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
NUP98-219ENST00000532475 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
NUP98-219ENST00000532475 EP400Q96L91 3159 aa12.81□□□□□ -0.36
NUP98-219ENST00000532475 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
NUP98-219ENST00000532475 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
NUP98-219ENST00000532475 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
NUP98-219ENST00000532475 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
NUP98-219ENST00000532475 APLP2Q06481 763 aa12.8□□□□□ -0.36
NUP98-219ENST00000532475 MST1RQ04912 1400 aa12.79□□□□□ -0.36
NUP98-219ENST00000532475 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms