RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
CTNND1-231ENST00000532463 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
CTNND1-231ENST00000532463 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
CTNND1-231ENST00000532463 SLC26A8Q96RN1 970 aa9.8□□□□□ -0.84
CTNND1-231ENST00000532463 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
CTNND1-231ENST00000532463 SPAG9O60271 1321 aaKnown RBP9.8□□□□□ -0.84
CTNND1-231ENST00000532463 ZKSCAN1P17029 563 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-231ENST00000532463 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-231ENST00000532463 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 AMOTL1Q8IY63 956 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 SCRIBQ14160 1630 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 NUCB2P80303 420 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 RRP9O43818 475 aaKnown RBP9.79□□□□□ -0.84
CTNND1-231ENST00000532463 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-231ENST00000532463 CCDC175P0C221 793 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 TTLL5Q6EMB2 1281 aa9.79□□□□□ -0.84
CTNND1-231ENST00000532463 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-231ENST00000532463 STAMBPO95630 424 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 RUFY2Q8WXA3 655 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 GOLGA6L10A0A0M3HER8 536 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 CCDC112Q8NEF3 446 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 CLGNO14967 610 aa9.78□□□□□ -0.84
CTNND1-231ENST00000532463 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
CTNND1-231ENST00000532463 REC8O95072 547 aa9.77□□□□□ -0.84
CTNND1-231ENST00000532463 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.84
CTNND1-231ENST00000532463 LMOD3Q0VAK6 560 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 CCDC91Q7Z6B0 441 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 TXLNBQ8N3L3 684 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 FILIP1LQ4L180 1135 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 LUC7LQ9NQ29 371 aaKnown RBP9.77□□□□□ -0.85
CTNND1-231ENST00000532463 KTN1Q86UP2 1357 aaKnown RBP9.77□□□□□ -0.85
CTNND1-231ENST00000532463 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-231ENST00000532463 SAFBQ15424 915 aaKnown RBP eCLIP9.77□□□□□ -0.85
CTNND1-231ENST00000532463 RILPL2Q969X0 211 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 GPATCH11Q8N954 259 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.85
CTNND1-231ENST00000532463 DDX11Q96FC9 970 aa9.77□□□□□ -0.85
CTNND1-231ENST00000532463 SHTN1A0MZ66 631 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 SYCP1Q15431 976 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-231ENST00000532463 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 LRRCC1Q9C099 1032 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 SOX12O15370 315 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 PDE4AP27815 886 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 CCDC181Q5TID7 509 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 TRIM5Q9C035 493 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 FAM107BQ9H098 131 aa9.76□□□□□ -0.85
CTNND1-231ENST00000532463 IQCEQ6IPM2 695 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 U2AF1L5P0DN76 240 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 PIP4K2AP48426 406 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 U2AF1Q01081 240 aaKnown RBP eCLIP9.75□□□□□ -0.852e-10■■□□□ 12.3
CTNND1-231ENST00000532463 CENPQQ7L2Z9 268 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 IPO4Q8TEX9 1081 aaKnown RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 TXLNAP40222 546 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 NOL10Q9BSC4 688 aaKnown RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 DHX16O60231 1041 aaKnown RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-231ENST00000532463 SMC3Q9UQE7 1217 aa9.75□□□□□ -0.85
CTNND1-231ENST00000532463 ERICH4A6NGS2 130 aa9.74□□□□□ -0.85
CTNND1-231ENST00000532463 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
CTNND1-231ENST00000532463 MAP2K1Q02750 393 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-231ENST00000532463 ZNHIT6Q9NWK9 470 aaKnown RBP9.74□□□□□ -0.85
CTNND1-231ENST00000532463 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
CTNND1-231ENST00000532463 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-231ENST00000532463 TRDNQ13061 729 aa9.74□□□□□ -0.85
CTNND1-231ENST00000532463 SEPT6Q14141 434 aa9.74□□□□□ -0.85
CTNND1-231ENST00000532463 RBM25P49756 843 aaKnown RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 FEZ1Q99689 392 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 SDF4Q9BRK5 362 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 HDGFL2Q7Z4V5 671 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 CCDC97Q96F63 343 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 PDE3BQ13370 1112 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 CCDC102AQ96A19 550 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 MAGEC2Q9UBF1 373 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 CFAP45Q9UL16 551 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 SMC2O95347 1197 aa9.73□□□□□ -0.85
CTNND1-231ENST00000532463 ZCCHC6Q5VYS8 1495 aaKnown RBP9.73□□□□□ -0.85
CTNND1-231ENST00000532463 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
CTNND1-231ENST00000532463 KIF3BO15066 747 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-231ENST00000532463 MICALCLQ6ZW33 695 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 RAD21O60216 631 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 DAAM2Q86T65 1068 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 ERICH2A1L162 156 aa9.72□□□□□ -0.85
CTNND1-231ENST00000532463 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.85
CTNND1-231ENST00000532463 BRMS1Q9HCU9 246 aa9.71□□□□□ -0.85
CTNND1-231ENST00000532463 CHMP7Q8WUX9 453 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-231ENST00000532463 GBP3Q9H0R5 595 aa9.71□□□□□ -0.86
CTNND1-231ENST00000532463 MBD3O95983 291 aa9.71□□□□□ -0.86
CTNND1-231ENST00000532463 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.86
CTNND1-231ENST00000532463 FAM193AP78312 1265 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms