RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 CLTCL1P53675 1640 aa23.26■■□□□ 1.31
CTSB-225ENST00000532409 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
CTSB-225ENST00000532409 TRPM2O94759 1503 aa23.24■■□□□ 1.31
CTSB-225ENST00000532409 FOXD1Q16676 465 aa23.24■■□□□ 1.31
CTSB-225ENST00000532409 PPP1R15AO75807 674 aaPredicted RBP23.23■■□□□ 1.31
CTSB-225ENST00000532409 BCANQ96GW7 911 aa23.23■■□□□ 1.31
CTSB-225ENST00000532409 UBAP1LF5GYI3 381 aa23.22■■□□□ 1.31
CTSB-225ENST00000532409 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
CTSB-225ENST00000532409 SETD5Q9C0A6 1442 aa23.2■■□□□ 1.3
CTSB-225ENST00000532409 PLEKHG1Q9ULL1 1385 aa23.2■■□□□ 1.3
CTSB-225ENST00000532409 MPHOSPH9Q99550 1183 aa23.16■■□□□ 1.3
CTSB-225ENST00000532409 RAB3GAP2Q9H2M9 1393 aa23.15■■□□□ 1.3
CTSB-225ENST00000532409 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
CTSB-225ENST00000532409 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
CTSB-225ENST00000532409 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
CTSB-225ENST00000532409 ADAMTS13Q76LX8 1427 aa23.14■■□□□ 1.29
CTSB-225ENST00000532409 KIF1BO60333 1816 aa23.13■■□□□ 1.29
CTSB-225ENST00000532409 XIRP1Q702N8 1843 aaKnown RBP23.13■■□□□ 1.29
CTSB-225ENST00000532409 ALKQ9UM73 1620 aa23.13■■□□□ 1.29
CTSB-225ENST00000532409 KCNA6P17658 529 aa23.13■■□□□ 1.29
CTSB-225ENST00000532409 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
CTSB-225ENST00000532409 NEXMIFQ5QGS0 1516 aa23.11■■□□□ 1.29
CTSB-225ENST00000532409 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
CTSB-225ENST00000532409 PIP4K2BP78356 416 aa23.1■■□□□ 1.29
CTSB-225ENST00000532409 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
CTSB-225ENST00000532409 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.29
CTSB-225ENST00000532409 TBX22Q9Y458 520 aa23.08■■□□□ 1.29
CTSB-225ENST00000532409 TMEM94Q12767 1356 aa23.08■■□□□ 1.29
CTSB-225ENST00000532409 TOM1O60784 492 aa23.07■■□□□ 1.28
CTSB-225ENST00000532409 CHD2O14647 1828 aaKnown RBP23.07■■□□□ 1.28
CTSB-225ENST00000532409 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
CTSB-225ENST00000532409 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
CTSB-225ENST00000532409 DIP2AQ14689 1571 aa23.04■■□□□ 1.28
CTSB-225ENST00000532409 SETBP1Q9Y6X0 1596 aa23.04■■□□□ 1.28
CTSB-225ENST00000532409 CCDC144AA2RUR9 1427 aa23.03■■□□□ 1.28
CTSB-225ENST00000532409 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
CTSB-225ENST00000532409 METP08581 1390 aa22.99■■□□□ 1.27
CTSB-225ENST00000532409 PPLO60437 1756 aa22.99■■□□□ 1.27
CTSB-225ENST00000532409 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
CTSB-225ENST00000532409 HSPA1LP34931 641 aa22.98■■□□□ 1.27
CTSB-225ENST00000532409 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
CTSB-225ENST00000532409 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
CTSB-225ENST00000532409 PIK3R4Q99570 1358 aa22.97■■□□□ 1.27
CTSB-225ENST00000532409 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
CTSB-225ENST00000532409 RPGRIP1LQ68CZ1 1315 aa22.94■■□□□ 1.26
CTSB-225ENST00000532409 VGFO15240 615 aaPredicted RBP22.94■■□□□ 1.26
CTSB-225ENST00000532409 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
CTSB-225ENST00000532409 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
CTSB-225ENST00000532409 ADGRF5Q8IZF2 1346 aa22.91■■□□□ 1.26
CTSB-225ENST00000532409 MSH6P52701 1360 aa22.9■■□□□ 1.26
CTSB-225ENST00000532409 HRCP23327 699 aa22.9■■□□□ 1.26
CTSB-225ENST00000532409 IFT172Q9UG01 1749 aa22.9■■□□□ 1.26
CTSB-225ENST00000532409 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
CTSB-225ENST00000532409 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
CTSB-225ENST00000532409 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
CTSB-225ENST00000532409 ROBO1Q9Y6N7 1651 aa22.84■■□□□ 1.25
CTSB-225ENST00000532409 NCOA3Q9Y6Q9 1424 aa22.83■■□□□ 1.25
CTSB-225ENST00000532409 FAM135BQ49AJ0 1406 aa22.82■■□□□ 1.24
CTSB-225ENST00000532409 SLAIN2Q9P270 581 aa22.81■■□□□ 1.24
CTSB-225ENST00000532409 ROBO2Q9HCK4 1378 aa22.8■■□□□ 1.24
CTSB-225ENST00000532409 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
CTSB-225ENST00000532409 PIK3C2GO75747 1445 aa22.8■■□□□ 1.24
CTSB-225ENST00000532409 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
CTSB-225ENST00000532409 DISP3Q9P2K9 1392 aa22.78■■□□□ 1.24
CTSB-225ENST00000532409 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.24
CTSB-225ENST00000532409 ATF3P18847 181 aa22.77■■□□□ 1.24
CTSB-225ENST00000532409 PTCH1Q13635 1447 aa22.76■■□□□ 1.23
CTSB-225ENST00000532409 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
CTSB-225ENST00000532409 MYOM2P54296 1465 aa22.75■■□□□ 1.23
CTSB-225ENST00000532409 CADPS2Q86UW7 1296 aa22.75■■□□□ 1.23
CTSB-225ENST00000532409 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
CTSB-225ENST00000532409 NRXN1Q9ULB1 1477 aa22.74■■□□□ 1.23
CTSB-225ENST00000532409 STK26Q9P289 416 aa22.74■■□□□ 1.23
CTSB-225ENST00000532409 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
CTSB-225ENST00000532409 CFAP70Q5T0N1 1121 aa22.72■■□□□ 1.23
CTSB-225ENST00000532409 DCCP43146 1447 aa22.71■■□□□ 1.23
CTSB-225ENST00000532409 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
CTSB-225ENST00000532409 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
CTSB-225ENST00000532409 MST1RQ04912 1400 aa22.7■■□□□ 1.22
CTSB-225ENST00000532409 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
CTSB-225ENST00000532409 DHX57Q6P158 1386 aaKnown RBP22.69■■□□□ 1.22
CTSB-225ENST00000532409 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
CTSB-225ENST00000532409 C14orf93Q9H972 538 aaKnown RBP22.69■■□□□ 1.22
CTSB-225ENST00000532409 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
CTSB-225ENST00000532409 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
CTSB-225ENST00000532409 BRINP3Q76B58 766 aa22.67■■□□□ 1.22
CTSB-225ENST00000532409 WAPLQ7Z5K2 1190 aa22.67■■□□□ 1.22
CTSB-225ENST00000532409 TECPR2O15040 1411 aa22.66■■□□□ 1.22
CTSB-225ENST00000532409 YTHDC2Q9H6S0 1430 aaKnown RBP22.66■■□□□ 1.22
CTSB-225ENST00000532409 KNDC1Q76NI1 1749 aa22.65■■□□□ 1.22
CTSB-225ENST00000532409 LAMC1P11047 1609 aa22.64■■□□□ 1.22
CTSB-225ENST00000532409 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
CTSB-225ENST00000532409 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.21
CTSB-225ENST00000532409 ILDR2Q71H61 639 aa22.63■■□□□ 1.21
CTSB-225ENST00000532409 AHDC1Q5TGY3 1603 aaPredicted RBP22.61■■□□□ 1.21
CTSB-225ENST00000532409 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
CTSB-225ENST00000532409 ADGRB1O14514 1584 aa22.6■■□□□ 1.21
CTSB-225ENST00000532409 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
CTSB-225ENST00000532409 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
CTSB-225ENST00000532409 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms