RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
GSDMD-210ENST00000531173 SCAF1Q9H7N4 1312 aaKnown RBP25.41■■□□□ 1.66
GSDMD-210ENST00000531173 RIMS2Q9UQ26 1411 aa25.41■■□□□ 1.66
GSDMD-210ENST00000531173 SLC26A8Q96RN1 970 aa25.41■■□□□ 1.66
GSDMD-210ENST00000531173 KCNA6P17658 529 aa25.4■■□□□ 1.66
GSDMD-210ENST00000531173 PLEKHG1Q9ULL1 1385 aa25.4■■□□□ 1.66
GSDMD-210ENST00000531173 NKTRP30414 1462 aaKnown RBP25.36■■□□□ 1.65
GSDMD-210ENST00000531173 TMEM94Q12767 1356 aa25.36■■□□□ 1.65
GSDMD-210ENST00000531173 NAIPQ13075 1403 aa25.36■■□□□ 1.65
GSDMD-210ENST00000531173 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
GSDMD-210ENST00000531173 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
GSDMD-210ENST00000531173 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
GSDMD-210ENST00000531173 MED1Q15648 1581 aaPredicted RBP25.31■■□□□ 1.64
GSDMD-210ENST00000531173 HDGFP51858 240 aaKnown RBP25.29■■□□□ 1.64
GSDMD-210ENST00000531173 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.28■■□□□ 1.64
GSDMD-210ENST00000531173 TBX22Q9Y458 520 aa25.28■■□□□ 1.64
GSDMD-210ENST00000531173 HFM1A2PYH4 1435 aa25.28■■□□□ 1.64
GSDMD-210ENST00000531173 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
GSDMD-210ENST00000531173 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
GSDMD-210ENST00000531173 CHGAP10645 457 aaKnown RBP25.26■■□□□ 1.63
GSDMD-210ENST00000531173 PROSER2Q86WR7 435 aaPredicted RBP25.26■■□□□ 1.63
GSDMD-210ENST00000531173 RBM33Q96EV2 1170 aaKnown RBP25.26■■□□□ 1.63
GSDMD-210ENST00000531173 FAM135BQ49AJ0 1406 aa25.26■■□□□ 1.63
GSDMD-210ENST00000531173 SENP3Q9H4L4 574 aaPredicted RBP25.25■■□□□ 1.63
GSDMD-210ENST00000531173 NUTM2DQ5VT03 806 aaPredicted RBP25.24■■□□□ 1.63
GSDMD-210ENST00000531173 BCANQ96GW7 911 aa25.24■■□□□ 1.63
GSDMD-210ENST00000531173 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
GSDMD-210ENST00000531173 TRPM2O94759 1503 aa25.23■■□□□ 1.63
GSDMD-210ENST00000531173 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
GSDMD-210ENST00000531173 SOCS7O14512 581 aa25.21■■□□□ 1.63
GSDMD-210ENST00000531173 PIK3R4Q99570 1358 aa25.2■■□□□ 1.63
GSDMD-210ENST00000531173 ROBO1Q9Y6N7 1651 aa25.2■■□□□ 1.62
GSDMD-210ENST00000531173 SETBP1Q9Y6X0 1596 aa25.19■■□□□ 1.62
GSDMD-210ENST00000531173 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
GSDMD-210ENST00000531173 PTPRUQ92729 1446 aa25.17■■□□□ 1.62
GSDMD-210ENST00000531173 NEXMIFQ5QGS0 1516 aa25.16■■□□□ 1.62
GSDMD-210ENST00000531173 MSH6P52701 1360 aa25.16■■□□□ 1.62
GSDMD-210ENST00000531173 XRN1Q8IZH2 1706 aaKnown RBP25.14■■□□□ 1.61
GSDMD-210ENST00000531173 KIF1BO60333 1816 aa25.13■■□□□ 1.61
GSDMD-210ENST00000531173 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.1■■□□□ 1.61
GSDMD-210ENST00000531173 SLAIN2Q9P270 581 aa25.1■■□□□ 1.61
GSDMD-210ENST00000531173 METP08581 1390 aa25.07■■□□□ 1.6
GSDMD-210ENST00000531173 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
GSDMD-210ENST00000531173 ZNF326Q5BKZ1 582 aaKnown RBP25.06■■□□□ 1.6
GSDMD-210ENST00000531173 TRIM52Q96A61 297 aa25.05■■□□□ 1.6
GSDMD-210ENST00000531173 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
GSDMD-210ENST00000531173 C19orf44Q9H6X5 657 aa25.04■■□□□ 1.6
GSDMD-210ENST00000531173 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
GSDMD-210ENST00000531173 PHLPP1O60346 1717 aa25.02■■□□□ 1.6
GSDMD-210ENST00000531173 COL16A1Q07092 1604 aaPredicted RBP25.01■■□□□ 1.59
GSDMD-210ENST00000531173 RGS17Q9UGC6 210 aaPredicted RBP25■■□□□ 1.59
GSDMD-210ENST00000531173 DCCP43146 1447 aa25■■□□□ 1.59
GSDMD-210ENST00000531173 PPLO60437 1756 aa25■■□□□ 1.59
GSDMD-210ENST00000531173 CADPS2Q86UW7 1296 aa24.99■■□□□ 1.59
GSDMD-210ENST00000531173 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
GSDMD-210ENST00000531173 PHF23Q9BUL5 403 aaPredicted RBP24.97■■□□□ 1.59
GSDMD-210ENST00000531173 FOXD1Q16676 465 aa24.96■■□□□ 1.59
GSDMD-210ENST00000531173 AHDC1Q5TGY3 1603 aaPredicted RBP24.96■■□□□ 1.59
GSDMD-210ENST00000531173 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
GSDMD-210ENST00000531173 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
GSDMD-210ENST00000531173 ATF3P18847 181 aa24.94■■□□□ 1.58
GSDMD-210ENST00000531173 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
GSDMD-210ENST00000531173 NALCNQ8IZF0 1738 aa24.92■■□□□ 1.58
GSDMD-210ENST00000531173 SPATA31E1Q6ZUB1 1445 aa24.92■■□□□ 1.58
GSDMD-210ENST00000531173 ADGRL3Q9HAR2 1447 aa24.92■■□□□ 1.58
GSDMD-210ENST00000531173 MPHOSPH9Q99550 1183 aa24.91■■□□□ 1.58
GSDMD-210ENST00000531173 MST1RQ04912 1400 aa24.91■■□□□ 1.58
GSDMD-210ENST00000531173 JCADQ9P266 1359 aa24.91■■□□□ 1.58
GSDMD-210ENST00000531173 PTCH1Q13635 1447 aa24.9■■□□□ 1.58
GSDMD-210ENST00000531173 BRINP3Q76B58 766 aa24.89■■□□□ 1.58
GSDMD-210ENST00000531173 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
GSDMD-210ENST00000531173 CCDC144AA2RUR9 1427 aa24.87■■□□□ 1.57
GSDMD-210ENST00000531173 ASXL1Q8IXJ9 1541 aa24.87■■□□□ 1.57
GSDMD-210ENST00000531173 ROBO2Q9HCK4 1378 aa24.86■■□□□ 1.57
GSDMD-210ENST00000531173 SHPRHQ149N8 1683 aa24.85■■□□□ 1.57
GSDMD-210ENST00000531173 NHSL1Q5SYE7 1610 aa24.85■■□□□ 1.57
GSDMD-210ENST00000531173 SETD5Q9C0A6 1442 aa24.85■■□□□ 1.57
GSDMD-210ENST00000531173 LRP6O75581 1613 aa24.83■■□□□ 1.57
GSDMD-210ENST00000531173 POTEAQ6S8J7 498 aa24.81■■□□□ 1.56
GSDMD-210ENST00000531173 ADGRF5Q8IZF2 1346 aa24.81■■□□□ 1.56
GSDMD-210ENST00000531173 ACIN1Q9UKV3 1341 aaKnown RBP24.8■■□□□ 1.56
GSDMD-210ENST00000531173 SPATA31A6Q5VVP1 1343 aa24.79■■□□□ 1.56
GSDMD-210ENST00000531173 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
GSDMD-210ENST00000531173 LAMC1P11047 1609 aa24.78■■□□□ 1.56
GSDMD-210ENST00000531173 RAB3GAP2Q9H2M9 1393 aa24.77■■□□□ 1.56
GSDMD-210ENST00000531173 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
GSDMD-210ENST00000531173 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
GSDMD-210ENST00000531173 TECPR2O15040 1411 aa24.76■■□□□ 1.55
GSDMD-210ENST00000531173 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
GSDMD-210ENST00000531173 NRXN1Q9ULB1 1477 aa24.72■■□□□ 1.55
GSDMD-210ENST00000531173 KNDC1Q76NI1 1749 aa24.71■■□□□ 1.55
GSDMD-210ENST00000531173 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
GSDMD-210ENST00000531173 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
GSDMD-210ENST00000531173 LRPPRCP42704 1394 aaKnown RBP24.69■■□□□ 1.54
GSDMD-210ENST00000531173 ABCC11Q96J66 1382 aa24.68■■□□□ 1.54
GSDMD-210ENST00000531173 MYOM2P54296 1465 aa24.67■■□□□ 1.54
GSDMD-210ENST00000531173 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
GSDMD-210ENST00000531173 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
GSDMD-210ENST00000531173 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
GSDMD-210ENST00000531173 SOS2Q07890 1332 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms