RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
CTSB-217ENST00000530296 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
CTSB-217ENST00000530296 NOS1P29475 1434 aa21■□□□□ 0.95
CTSB-217ENST00000530296 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
CTSB-217ENST00000530296 IQGAP3Q86VI3 1631 aa20.99■□□□□ 0.95
CTSB-217ENST00000530296 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
CTSB-217ENST00000530296 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
CTSB-217ENST00000530296 TET3O43151 1660 aa20.99■□□□□ 0.95
CTSB-217ENST00000530296 PROSER2Q86WR7 435 aaPredicted RBP20.98■□□□□ 0.95
CTSB-217ENST00000530296 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
CTSB-217ENST00000530296 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
CTSB-217ENST00000530296 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
CTSB-217ENST00000530296 MSH6P52701 1360 aa20.94■□□□□ 0.94
CTSB-217ENST00000530296 NWD1Q149M9 1564 aa20.93■□□□□ 0.94
CTSB-217ENST00000530296 SLC26A8Q96RN1 970 aa20.93■□□□□ 0.94
CTSB-217ENST00000530296 BCANQ96GW7 911 aa20.92■□□□□ 0.94
CTSB-217ENST00000530296 RGS17Q9UGC6 210 aaPredicted RBP20.92■□□□□ 0.94
CTSB-217ENST00000530296 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
CTSB-217ENST00000530296 NCOA3Q9Y6Q9 1424 aa20.9■□□□□ 0.94
CTSB-217ENST00000530296 PLEKHG1Q9ULL1 1385 aa20.89■□□□□ 0.93
CTSB-217ENST00000530296 HRCP23327 699 aa20.89■□□□□ 0.93
CTSB-217ENST00000530296 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
CTSB-217ENST00000530296 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.88■□□□□ 0.93
CTSB-217ENST00000530296 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
CTSB-217ENST00000530296 RAB3GAP2Q9H2M9 1393 aa20.86■□□□□ 0.93
CTSB-217ENST00000530296 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
CTSB-217ENST00000530296 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
CTSB-217ENST00000530296 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
CTSB-217ENST00000530296 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
CTSB-217ENST00000530296 E9PCH4 1651 aa20.85■□□□□ 0.93
CTSB-217ENST00000530296 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
CTSB-217ENST00000530296 JCADQ9P266 1359 aa20.85■□□□□ 0.93
CTSB-217ENST00000530296 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.93
CTSB-217ENST00000530296 PHLPP1O60346 1717 aa20.81■□□□□ 0.92
CTSB-217ENST00000530296 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
CTSB-217ENST00000530296 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
CTSB-217ENST00000530296 DIP2AQ14689 1571 aa20.8■□□□□ 0.92
CTSB-217ENST00000530296 POTEAQ6S8J7 498 aa20.8■□□□□ 0.92
CTSB-217ENST00000530296 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
CTSB-217ENST00000530296 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
CTSB-217ENST00000530296 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
CTSB-217ENST00000530296 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
CTSB-217ENST00000530296 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
CTSB-217ENST00000530296 C19orf44Q9H6X5 657 aa20.77■□□□□ 0.92
CTSB-217ENST00000530296 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
CTSB-217ENST00000530296 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
CTSB-217ENST00000530296 ATF3P18847 181 aa20.74■□□□□ 0.91
CTSB-217ENST00000530296 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
CTSB-217ENST00000530296 TRPM2O94759 1503 aa20.73■□□□□ 0.91
CTSB-217ENST00000530296 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
CTSB-217ENST00000530296 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
CTSB-217ENST00000530296 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
CTSB-217ENST00000530296 AHDC1Q5TGY3 1603 aaPredicted RBP20.69■□□□□ 0.9
CTSB-217ENST00000530296 DCCP43146 1447 aa20.69■□□□□ 0.9
CTSB-217ENST00000530296 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.68■□□□□ 0.9
CTSB-217ENST00000530296 MEX3CQ5U5Q3 659 aaKnown RBP20.68■□□□□ 0.9
CTSB-217ENST00000530296 SHPRHQ149N8 1683 aa20.66■□□□□ 0.9
CTSB-217ENST00000530296 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
CTSB-217ENST00000530296 AMOTL2Q9Y2J4 779 aa20.65■□□□□ 0.9
CTSB-217ENST00000530296 FOXD1Q16676 465 aa20.64■□□□□ 0.89
CTSB-217ENST00000530296 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
CTSB-217ENST00000530296 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
CTSB-217ENST00000530296 KIF1BO60333 1816 aa20.61■□□□□ 0.89
CTSB-217ENST00000530296 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
CTSB-217ENST00000530296 LRP6O75581 1613 aa20.6■□□□□ 0.89
CTSB-217ENST00000530296 SETBP1Q9Y6X0 1596 aa20.59■□□□□ 0.89
CTSB-217ENST00000530296 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
CTSB-217ENST00000530296 SETD1AO15047 1707 aaKnown RBP20.57■□□□□ 0.88
CTSB-217ENST00000530296 RXRBP28702 533 aa20.57■□□□□ 0.88
CTSB-217ENST00000530296 PTPRUQ92729 1446 aa20.57■□□□□ 0.88
CTSB-217ENST00000530296 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
CTSB-217ENST00000530296 LRRC59Q96AG4 307 aaKnown RBP20.56■□□□□ 0.88
CTSB-217ENST00000530296 ANKRD30BQ9BXX2 1392 aa20.56■□□□□ 0.88
CTSB-217ENST00000530296 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
CTSB-217ENST00000530296 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
CTSB-217ENST00000530296 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
CTSB-217ENST00000530296 UPF1Q92900 1129 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTSB-217ENST00000530296 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
CTSB-217ENST00000530296 NRXN3Q9Y4C0 1643 aa20.52■□□□□ 0.88
CTSB-217ENST00000530296 MST1RQ04912 1400 aa20.52■□□□□ 0.87
CTSB-217ENST00000530296 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
CTSB-217ENST00000530296 NHSL1Q5SYE7 1610 aa20.51■□□□□ 0.87
CTSB-217ENST00000530296 ADGRL3Q9HAR2 1447 aa20.5■□□□□ 0.87
CTSB-217ENST00000530296 NUTM2BA6NNL0 878 aaPredicted RBP20.49■□□□□ 0.87
CTSB-217ENST00000530296 NUTM2EB1AL46 878 aaPredicted RBP20.49■□□□□ 0.87
CTSB-217ENST00000530296 NUTM2AQ8IVF1 878 aaPredicted RBP20.49■□□□□ 0.87
CTSB-217ENST00000530296 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
CTSB-217ENST00000530296 METP08581 1390 aa20.47■□□□□ 0.87
CTSB-217ENST00000530296 AFF2P51816 1311 aa20.47■□□□□ 0.87
CTSB-217ENST00000530296 NEXMIFQ5QGS0 1516 aa20.47■□□□□ 0.87
CTSB-217ENST00000530296 RGL3Q3MIN7 710 aa20.46■□□□□ 0.87
CTSB-217ENST00000530296 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
CTSB-217ENST00000530296 STAC3Q96MF2 364 aa20.44■□□□□ 0.86
CTSB-217ENST00000530296 RBM6P78332 1123 aaKnown RBP20.43■□□□□ 0.86
CTSB-217ENST00000530296 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
CTSB-217ENST00000530296 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
CTSB-217ENST00000530296 PPLO60437 1756 aa20.41■□□□□ 0.86
CTSB-217ENST00000530296 NGLY1Q96IV0 654 aa20.41■□□□□ 0.86
CTSB-217ENST00000530296 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
CTSB-217ENST00000530296 QTRT2Q9H974 415 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms