RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 NOS1P29475 1434 aa8.89□□□□□ -0.99
CTSB-216ENST00000530290 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
CTSB-216ENST00000530290 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
CTSB-216ENST00000530290 SLC52A1Q9NWF4 448 aa8.89□□□□□ -0.99
CTSB-216ENST00000530290 PIK3R4Q99570 1358 aa8.87□□□□□ -0.99
CTSB-216ENST00000530290 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
CTSB-216ENST00000530290 PLEKHG1Q9ULL1 1385 aa8.87□□□□□ -0.99
CTSB-216ENST00000530290 ANKRD30AQ9BXX3 1397 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 SLAIN2Q9P270 581 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 ABCC5O15440 1437 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 ZFYVE9O95405 1425 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 DCCP43146 1447 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 DAPK1P53355 1430 aa8.86□□□□□ -0.99
CTSB-216ENST00000530290 IDI1Q13907 227 aa8.85□□□□□ -0.99
CTSB-216ENST00000530290 CADPS2Q86UW7 1296 aa8.85□□□□□ -0.99
CTSB-216ENST00000530290 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
CTSB-216ENST00000530290 GCC2Q8IWJ2 1684 aa8.85□□□□□ -0.99
CTSB-216ENST00000530290 ADGRL2O95490 1459 aa8.84□□□□□ -0.99
CTSB-216ENST00000530290 MEX3CQ5U5Q3 659 aaKnown RBP8.84□□□□□ -0.99
CTSB-216ENST00000530290 MYO5BQ9ULV0 1848 aa8.84□□□□□ -0.99
CTSB-216ENST00000530290 LRP6O75581 1613 aa8.83□□□□□ -1
CTSB-216ENST00000530290 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.83□□□□□ -1
CTSB-216ENST00000530290 FOXD1Q16676 465 aa8.83□□□□□ -1
CTSB-216ENST00000530290 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.83□□□□□ -1
CTSB-216ENST00000530290 SLC26A8Q96RN1 970 aa8.83□□□□□ -1
CTSB-216ENST00000530290 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
CTSB-216ENST00000530290 RIMS2Q9UQ26 1411 aa8.82□□□□□ -1
CTSB-216ENST00000530290 TRPM2O94759 1503 aa8.82□□□□□ -1
CTSB-216ENST00000530290 PPP1R15AO75807 674 aaPredicted RBP8.82□□□□□ -1
CTSB-216ENST00000530290 TBX22Q9Y458 520 aa8.82□□□□□ -1
CTSB-216ENST00000530290 RXRBP28702 533 aa8.81□□□□□ -1
CTSB-216ENST00000530290 BCANQ96GW7 911 aa8.81□□□□□ -1
CTSB-216ENST00000530290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.81□□□□□ -1
CTSB-216ENST00000530290 C19orf44Q9H6X5 657 aa8.81□□□□□ -1
CTSB-216ENST00000530290 RRP7BPQ9NSQ0 103 aa8.81□□□□□ -1
CTSB-216ENST00000530290 SETBP1Q9Y6X0 1596 aa8.81□□□□□ -1
CTSB-216ENST00000530290 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
CTSB-216ENST00000530290 NHSL1Q5SYE7 1610 aa8.8□□□□□ -1
CTSB-216ENST00000530290 ATF3P18847 181 aa8.8□□□□□ -1
CTSB-216ENST00000530290 UNC13BO14795 1591 aa8.79□□□□□ -1
CTSB-216ENST00000530290 C14orf37Q86TY3 774 aa8.79□□□□□ -1
CTSB-216ENST00000530290 ASXL1Q8IXJ9 1541 aa8.79□□□□□ -1
CTSB-216ENST00000530290 ADAMTS13Q76LX8 1427 aa8.79□□□□□ -1
CTSB-216ENST00000530290 ANKRD50Q9ULJ7 1429 aa8.79□□□□□ -1
CTSB-216ENST00000530290 XRN1Q8IZH2 1706 aaKnown RBP8.78□□□□□ -1
CTSB-216ENST00000530290 IQGAP3Q86VI3 1631 aa8.78□□□□□ -1
CTSB-216ENST00000530290 APLP2Q06481 763 aa8.77□□□□□ -1.01
CTSB-216ENST00000530290 KANK4Q5T7N3 995 aaPredicted RBP8.77□□□□□ -1.01
CTSB-216ENST00000530290 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
CTSB-216ENST00000530290 RBM33Q96EV2 1170 aaKnown RBP8.76□□□□□ -1.01
CTSB-216ENST00000530290 LAMC1P11047 1609 aa8.76□□□□□ -1.01
CTSB-216ENST00000530290 ATAD2Q6PL18 1390 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 RGS12O14924 1447 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 RBM6P78332 1123 aaKnown RBP8.75□□□□□ -1.01
CTSB-216ENST00000530290 BRINP3Q76B58 766 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 LRRC59Q96AG4 307 aaKnown RBP8.75□□□□□ -1.01
CTSB-216ENST00000530290 NGLY1Q96IV0 654 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 ZRANB1Q9UGI0 708 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 AFF2P51816 1311 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 E9PCH4 1651 aa8.75□□□□□ -1.01
CTSB-216ENST00000530290 MST1RQ04912 1400 aa8.74□□□□□ -1.01
CTSB-216ENST00000530290 ADGRL3Q9HAR2 1447 aa8.73□□□□□ -1.01
CTSB-216ENST00000530290 NRXN3Q9Y4C0 1643 aa8.72□□□□□ -1.01
CTSB-216ENST00000530290 PTCH1Q13635 1447 aa8.72□□□□□ -1.01
CTSB-216ENST00000530290 ROCK1Q13464 1354 aa8.72□□□□□ -1.01
CTSB-216ENST00000530290 PNPLA6Q8IY17 1366 aa8.72□□□□□ -1.01
CTSB-216ENST00000530290 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.01
CTSB-216ENST00000530290 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
CTSB-216ENST00000530290 AMOTL2Q9Y2J4 779 aa8.71□□□□□ -1.02
CTSB-216ENST00000530290 NALCNQ8IZF0 1738 aa8.71□□□□□ -1.02
CTSB-216ENST00000530290 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
CTSB-216ENST00000530290 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
CTSB-216ENST00000530290 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
CTSB-216ENST00000530290 PTPRUQ92729 1446 aa8.7□□□□□ -1.02
CTSB-216ENST00000530290 EP400Q96L91 3159 aa8.69□□□□□ -1.02
CTSB-216ENST00000530290 NUTM2BA6NNL0 878 aaPredicted RBP8.69□□□□□ -1.02
CTSB-216ENST00000530290 NUTM2EB1AL46 878 aaPredicted RBP8.69□□□□□ -1.02
CTSB-216ENST00000530290 CHGAP10645 457 aaKnown RBP8.69□□□□□ -1.02
CTSB-216ENST00000530290 NUTM2AQ8IVF1 878 aaPredicted RBP8.69□□□□□ -1.02
CTSB-216ENST00000530290 C8orf37Q96NL8 207 aa8.69□□□□□ -1.02
CTSB-216ENST00000530290 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
CTSB-216ENST00000530290 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.68□□□□□ -1.02
CTSB-216ENST00000530290 QTRT2Q9H974 415 aaKnown RBP8.68□□□□□ -1.02
CTSB-216ENST00000530290 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
CTSB-216ENST00000530290 ATRNO75882 1429 aa8.67□□□□□ -1.02
CTSB-216ENST00000530290 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
CTSB-216ENST00000530290 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
CTSB-216ENST00000530290 KIF1BO60333 1816 aa8.66□□□□□ -1.02
CTSB-216ENST00000530290 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
CTSB-216ENST00000530290 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
CTSB-216ENST00000530290 NEXMIFQ5QGS0 1516 aa8.65□□□□□ -1.02
CTSB-216ENST00000530290 HFM1A2PYH4 1435 aa8.65□□□□□ -1.02
CTSB-216ENST00000530290 USP21Q9UK80 565 aa8.65□□□□□ -1.02
CTSB-216ENST00000530290 LRP5O75197 1615 aa8.65□□□□□ -1.03
CTSB-216ENST00000530290 CDC42BPGQ6DT37 1551 aa8.65□□□□□ -1.03
CTSB-216ENST00000530290 MYOM2P54296 1465 aa8.64□□□□□ -1.03
CTSB-216ENST00000530290 NUP155O75694 1391 aa8.64□□□□□ -1.03
CTSB-216ENST00000530290 FAM50AQ14320 339 aaKnown RBP8.64□□□□□ -1.03
CTSB-216ENST00000530290 METP08581 1390 aa8.63□□□□□ -1.03
CTSB-216ENST00000530290 NPHP3Q7Z494 1330 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms