RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 MPNDQ8N594 471 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 C22orf23Q9BZE7 217 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
CTNND1-223ENST00000529986 TAF7LQ5H9L4 462 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 GAPVD1Q14C86 1478 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 VPS37CA5D8V6 355 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-223ENST00000529986 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-223ENST00000529986 GGT6Q6P531 493 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 CEP89Q96ST8 783 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 CGNL1Q0VF96 1302 aa9.33□□□□□ -0.92
CTNND1-223ENST00000529986 FOSBP53539 338 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 KIF3AQ9Y496 699 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 MNS1Q8NEH6 495 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 APPP05067 770 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 TPM2P07951 284 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 E9PSI1 815 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 CCDC70Q6NSX1 233 aa9.32□□□□□ -0.92
CTNND1-223ENST00000529986 CAVIN1Q6NZI2 390 aaKnown RBP9.32□□□□□ -0.92
CTNND1-223ENST00000529986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.922e-8■□□□□ 11.3
CTNND1-223ENST00000529986 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 TPM1P09493 284 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 LNPKQ9C0E8 428 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 MAP7D2Q96T17 732 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
CTNND1-223ENST00000529986 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-223ENST00000529986 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
CTNND1-223ENST00000529986 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
CTNND1-223ENST00000529986 ANO2Q9NQ90 1003 aa9.3□□□□□ -0.92
CTNND1-223ENST00000529986 DIAPH3Q9NSV4 1193 aa9.3□□□□□ -0.92
CTNND1-223ENST00000529986 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
CTNND1-223ENST00000529986 SKIDA1Q1XH10 827 aa9.3□□□□□ -0.92
CTNND1-223ENST00000529986 SASS6Q6UVJ0 657 aa9.3□□□□□ -0.92
CTNND1-223ENST00000529986 ARGLU1Q9NWB6 273 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-223ENST00000529986 REC8O95072 547 aa9.29□□□□□ -0.92
CTNND1-223ENST00000529986 NUCB2P80303 420 aa9.29□□□□□ -0.92
CTNND1-223ENST00000529986 PANK1Q8TE04 598 aa9.29□□□□□ -0.92
CTNND1-223ENST00000529986 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
CTNND1-223ENST00000529986 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-223ENST00000529986 MARCH6O60337 910 aa9.29□□□□□ -0.92
CTNND1-223ENST00000529986 MTERF4Q7Z6M4 381 aaKnown RBP9.29□□□□□ -0.92
CTNND1-223ENST00000529986 CFTRP13569 1480 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 SMC3Q9UQE7 1217 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 LRRC9Q6ZRR7 1453 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
CTNND1-223ENST00000529986 DZIP1LQ8IYY4 767 aaKnown RBP9.28□□□□□ -0.92
CTNND1-223ENST00000529986 CCDC66A2RUB6 948 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 H0YHG0 523 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 PRPF40AO75400 957 aaKnown RBP9.27□□□□□ -0.93
CTNND1-223ENST00000529986 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.93
CTNND1-223ENST00000529986 TTLL5Q6EMB2 1281 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 DDX19BQ9UMR2 479 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 NUTM2FA1L443 756 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 HNRNPMP52272 730 aaKnown RBP eCLIP9.27□□□□□ -0.935e-7■■■■□ 21
CTNND1-223ENST00000529986 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 RUFY1Q96T51 708 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
CTNND1-223ENST00000529986 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 TERF2IPQ9NYB0 399 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 ZKSCAN1P17029 563 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-223ENST00000529986 FYCO1Q9BQS8 1478 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 UQCRHLA0A096LP55 91 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 UQCRHP07919 91 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 PDILTQ8N807 584 aa9.26□□□□□ -0.93
CTNND1-223ENST00000529986 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 PRDM10Q9NQV6 1147 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 AK7Q96M32 723 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 HDAC5Q9UQL6 1122 aa9.25□□□□□ -0.93
CTNND1-223ENST00000529986 MSH5O43196 834 aa9.24□□□□□ -0.93
CTNND1-223ENST00000529986 RRP12Q5JTH9 1297 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 DHX37Q8IY37 1157 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
CTNND1-223ENST00000529986 AKAP17AQ02040 695 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 CWC15Q9P013 229 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 NAP1L1P55209 391 aaKnown RBP9.24□□□□□ -0.93
CTNND1-223ENST00000529986 GRPEL1Q9HAV7 217 aa9.24□□□□□ -0.93
CTNND1-223ENST00000529986 USP47Q96K76 1375 aa9.24□□□□□ -0.93
CTNND1-223ENST00000529986 CPLX1O14810 134 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 CCDC73Q6ZRK6 1079 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 TSPY26PQ9H489 355 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 ACBD3Q9H3P7 528 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 AMPHP49418 695 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 PLCD4Q9BRC7 762 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 ERICH4A6NGS2 130 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms