RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 HFM1A2PYH4 1435 aa17■□□□□ 0.31
CTSC-206ENST00000529974 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
CTSC-206ENST00000529974 TOM1O60784 492 aa16.99■□□□□ 0.31
CTSC-206ENST00000529974 CLTCL1P53675 1640 aa16.99■□□□□ 0.31
CTSC-206ENST00000529974 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
CTSC-206ENST00000529974 TRPM2O94759 1503 aa16.98■□□□□ 0.31
CTSC-206ENST00000529974 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
CTSC-206ENST00000529974 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
CTSC-206ENST00000529974 DIP2AQ14689 1571 aa16.97■□□□□ 0.31
CTSC-206ENST00000529974 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
CTSC-206ENST00000529974 NRXN3Q9Y4C0 1643 aa16.96■□□□□ 0.3
CTSC-206ENST00000529974 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
CTSC-206ENST00000529974 HSPA1LP34931 641 aa16.95■□□□□ 0.3
CTSC-206ENST00000529974 ADAMTS13Q76LX8 1427 aa16.95■□□□□ 0.3
CTSC-206ENST00000529974 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
CTSC-206ENST00000529974 KCNA6P17658 529 aa16.93■□□□□ 0.3
CTSC-206ENST00000529974 MED1Q15648 1581 aaPredicted RBP16.93■□□□□ 0.3
CTSC-206ENST00000529974 SETBP1Q9Y6X0 1596 aa16.91■□□□□ 0.3
CTSC-206ENST00000529974 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
CTSC-206ENST00000529974 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
CTSC-206ENST00000529974 KIF1BO60333 1816 aa16.91■□□□□ 0.3
CTSC-206ENST00000529974 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
CTSC-206ENST00000529974 PPP1R15AO75807 674 aaPredicted RBP16.9■□□□□ 0.3
CTSC-206ENST00000529974 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
CTSC-206ENST00000529974 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
CTSC-206ENST00000529974 XRN1Q8IZH2 1706 aaKnown RBP16.89■□□□□ 0.29
CTSC-206ENST00000529974 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
CTSC-206ENST00000529974 ILDR2Q71H61 639 aa16.87■□□□□ 0.29
CTSC-206ENST00000529974 BCANQ96GW7 911 aa16.87■□□□□ 0.29
CTSC-206ENST00000529974 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
CTSC-206ENST00000529974 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
CTSC-206ENST00000529974 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
CTSC-206ENST00000529974 PIK3R4Q99570 1358 aa16.86■□□□□ 0.29
CTSC-206ENST00000529974 PROSER2Q86WR7 435 aaPredicted RBP16.85■□□□□ 0.29
CTSC-206ENST00000529974 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
CTSC-206ENST00000529974 SETD1AO15047 1707 aaKnown RBP16.84■□□□□ 0.29
CTSC-206ENST00000529974 FAM135BQ49AJ0 1406 aa16.84■□□□□ 0.29
CTSC-206ENST00000529974 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
CTSC-206ENST00000529974 PPLO60437 1756 aa16.82■□□□□ 0.28
CTSC-206ENST00000529974 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
CTSC-206ENST00000529974 MSH6P52701 1360 aa16.81■□□□□ 0.28
CTSC-206ENST00000529974 TRIM52Q96A61 297 aa16.81■□□□□ 0.28
CTSC-206ENST00000529974 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
CTSC-206ENST00000529974 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
CTSC-206ENST00000529974 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
CTSC-206ENST00000529974 METP08581 1390 aa16.77■□□□□ 0.28
CTSC-206ENST00000529974 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
CTSC-206ENST00000529974 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
CTSC-206ENST00000529974 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
CTSC-206ENST00000529974 FOXD1Q16676 465 aa16.74■□□□□ 0.27
CTSC-206ENST00000529974 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
CTSC-206ENST00000529974 DCCP43146 1447 aa16.73■□□□□ 0.27
CTSC-206ENST00000529974 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
CTSC-206ENST00000529974 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
CTSC-206ENST00000529974 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
CTSC-206ENST00000529974 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
CTSC-206ENST00000529974 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
CTSC-206ENST00000529974 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
CTSC-206ENST00000529974 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
CTSC-206ENST00000529974 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
CTSC-206ENST00000529974 SOCS7O14512 581 aa16.69■□□□□ 0.26
CTSC-206ENST00000529974 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
CTSC-206ENST00000529974 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
CTSC-206ENST00000529974 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
CTSC-206ENST00000529974 MST1RQ04912 1400 aa16.68■□□□□ 0.26
CTSC-206ENST00000529974 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
CTSC-206ENST00000529974 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
CTSC-206ENST00000529974 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
CTSC-206ENST00000529974 ASXL1Q8IXJ9 1541 aa16.67■□□□□ 0.26
CTSC-206ENST00000529974 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
CTSC-206ENST00000529974 SHPRHQ149N8 1683 aa16.66■□□□□ 0.26
CTSC-206ENST00000529974 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
CTSC-206ENST00000529974 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.26
CTSC-206ENST00000529974 ATF3P18847 181 aa16.64■□□□□ 0.25
CTSC-206ENST00000529974 KNDC1Q76NI1 1749 aa16.64■□□□□ 0.25
CTSC-206ENST00000529974 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
CTSC-206ENST00000529974 JCADQ9P266 1359 aa16.63■□□□□ 0.25
CTSC-206ENST00000529974 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
CTSC-206ENST00000529974 BRINP3Q76B58 766 aa16.62■□□□□ 0.25
CTSC-206ENST00000529974 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
CTSC-206ENST00000529974 LRP6O75581 1613 aa16.61■□□□□ 0.25
CTSC-206ENST00000529974 LAMC1P11047 1609 aa16.61■□□□□ 0.25
CTSC-206ENST00000529974 RGS17Q9UGC6 210 aaPredicted RBP16.61■□□□□ 0.25
CTSC-206ENST00000529974 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
CTSC-206ENST00000529974 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
CTSC-206ENST00000529974 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
CTSC-206ENST00000529974 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CTSC-206ENST00000529974 TECPR2O15040 1411 aa16.6■□□□□ 0.25
CTSC-206ENST00000529974 MYOM2P54296 1465 aa16.59■□□□□ 0.25
CTSC-206ENST00000529974 RGL3Q3MIN7 710 aa16.58■□□□□ 0.24
CTSC-206ENST00000529974 C1orf167Q5SNV9 1468 aa16.57■□□□□ 0.24
CTSC-206ENST00000529974 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
CTSC-206ENST00000529974 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
CTSC-206ENST00000529974 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
CTSC-206ENST00000529974 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.23
CTSC-206ENST00000529974 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
CTSC-206ENST00000529974 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
CTSC-206ENST00000529974 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
CTSC-206ENST00000529974 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
CTSC-206ENST00000529974 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms