RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-214ENST00000529689 GOLGA6L3A6NEY3 463 aa12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 DZIP1LQ8IYY4 767 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 RUNDC1Q96C34 613 aa12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 ROCK1Q13464 1354 aa12.47□□□□□ -0.41
CCDC90B-214ENST00000529689 CASC1Q6TDU7 716 aa12.46□□□□□ -0.41
CCDC90B-214ENST00000529689 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-214ENST00000529689 DNTTIP2Q5QJE6 756 aaKnown RBP12.46□□□□□ -0.42
CCDC90B-214ENST00000529689 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.42
CCDC90B-214ENST00000529689 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
CCDC90B-214ENST00000529689 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
CCDC90B-214ENST00000529689 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
CCDC90B-214ENST00000529689 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-214ENST00000529689 ERBINQ96RT1 1412 aa12.44□□□□□ -0.42
CCDC90B-214ENST00000529689 ARHGAP5Q13017 1502 aa12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 CAMSAP2Q08AD1 1489 aa12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 DISP3Q9P2K9 1392 aa12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 OS9Q13438 667 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-214ENST00000529689 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
CCDC90B-214ENST00000529689 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
CCDC90B-214ENST00000529689 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
CCDC90B-214ENST00000529689 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 A0A0G2JS52 829 aa12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 GBP4Q96PP9 640 aa12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 RTF1Q92541 710 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 KIAA0586Q9BVV6 1533 aa12.41□□□□□ -0.42
CCDC90B-214ENST00000529689 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-214ENST00000529689 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
CCDC90B-214ENST00000529689 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-214ENST00000529689 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.43
CCDC90B-214ENST00000529689 KCNJ4P48050 445 aa12.39□□□□□ -0.43
CCDC90B-214ENST00000529689 SCAPERQ9BY12 1400 aa12.39□□□□□ -0.43
CCDC90B-214ENST00000529689 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
CCDC90B-214ENST00000529689 IGHDP01880 384 aa12.38□□□□□ -0.43
CCDC90B-214ENST00000529689 SYNJ2O15056 1496 aa12.38□□□□□ -0.43
CCDC90B-214ENST00000529689 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-214ENST00000529689 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-214ENST00000529689 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
CCDC90B-214ENST00000529689 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-214ENST00000529689 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
CCDC90B-214ENST00000529689 TNNQ9UQP3 1299 aa12.37□□□□□ -0.43
CCDC90B-214ENST00000529689 ADGRF5Q8IZF2 1346 aa12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 MSNP26038 577 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 PDE3AQ14432 1141 aa12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 GPATCH8Q9UKJ3 1502 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 FBLN1P23142 703 aa12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
CCDC90B-214ENST00000529689 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-214ENST00000529689 CUL7Q14999 1698 aa12.35□□□□□ -0.43
CCDC90B-214ENST00000529689 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
CCDC90B-214ENST00000529689 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
CCDC90B-214ENST00000529689 CALD1Q05682 793 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-214ENST00000529689 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 RILPL2Q969X0 211 aa12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 TESK2Q96S53 571 aa12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
CCDC90B-214ENST00000529689 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
CCDC90B-214ENST00000529689 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
CCDC90B-214ENST00000529689 TRAK2O60296 914 aa12.31□□□□□ -0.44
CCDC90B-214ENST00000529689 COG3Q96JB2 828 aa12.31□□□□□ -0.44
CCDC90B-214ENST00000529689 AMPHP49418 695 aa12.31□□□□□ -0.44
CCDC90B-214ENST00000529689 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-214ENST00000529689 FGD1P98174 961 aa12.31□□□□□ -0.44
CCDC90B-214ENST00000529689 NUTM2GQ5VZR2 741 aa12.3□□□□□ -0.44
CCDC90B-214ENST00000529689 GRIN2AQ12879 1464 aa12.3□□□□□ -0.44
CCDC90B-214ENST00000529689 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
CCDC90B-214ENST00000529689 PLEKHH1Q9ULM0 1364 aa12.3□□□□□ -0.44
CCDC90B-214ENST00000529689 SEC24BO95487 1268 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 MVPQ14764 893 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 TMEM57Q8N5G2 664 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 PCDHB15Q9Y5E8 787 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
CCDC90B-214ENST00000529689 MCCP23508 829 aa12.28□□□□□ -0.44
CCDC90B-214ENST00000529689 ATF7IPQ6VMQ6 1270 aa12.28□□□□□ -0.44
CCDC90B-214ENST00000529689 CCDC141Q6ZP82 1450 aa12.28□□□□□ -0.44
CCDC90B-214ENST00000529689 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
CCDC90B-214ENST00000529689 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.44
CCDC90B-214ENST00000529689 DCTN1Q14203 1278 aa12.27□□□□□ -0.44
CCDC90B-214ENST00000529689 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms