RNA–Protein interactions for RNA: ENST00000529650.1

PRMT1-213, Transcript of protein arginine methyltransferase 1, human

TSL 2

Gene PRMT1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT1-213	ENST00000529650	SLC26A8	Q96RN1	970 aa		34.06	■■■■□ 3.04
PRMT1-213	ENST00000529650	NKTR	P30414	1462 aa	Known RBP	34.06	■■■■□ 3.04
PRMT1-213	ENST00000529650	KCNA6	P17658	529 aa		34.04	■■■■□ 3.04
PRMT1-213	ENST00000529650	IQGAP3	Q86VI3	1631 aa		34.03	■■■■□ 3.04
PRMT1-213	ENST00000529650	ZFYVE9	O95405	1425 aa		34.03	■■■■□ 3.04
PRMT1-213	ENST00000529650	ROBO1	Q9Y6N7	1651 aa		34.01	■■■■□ 3.04
PRMT1-213	ENST00000529650	CHD2	O14647	1828 aa	Known RBP	34.01	■■■■□ 3.03
PRMT1-213	ENST00000529650	ROCK1	Q13464	1354 aa		33.98	■■■■□ 3.03
PRMT1-213	ENST00000529650	FAM135B	Q49AJ0	1406 aa		33.97	■■■■□ 3.03
PRMT1-213	ENST00000529650	RIMS2	Q9UQ26	1411 aa		33.97	■■■■□ 3.03
PRMT1-213	ENST00000529650	BCAN	Q96GW7	911 aa		33.97	■■■■□ 3.03
PRMT1-213	ENST00000529650	PROSER2	Q86WR7	435 aa	Predicted RBP	33.96	■■■■□ 3.03
PRMT1-213	ENST00000529650	PLEKHG1	Q9ULL1	1385 aa		33.96	■■■■□ 3.03
PRMT1-213	ENST00000529650	RBM33	Q96EV2	1170 aa	Known RBP	33.93	■■■■□ 3.02
PRMT1-213	ENST00000529650	PPP1R15A	O75807	674 aa	Predicted RBP	33.92	■■■■□ 3.02
PRMT1-213	ENST00000529650	MSH6	P52701	1360 aa		33.87	■■■■□ 3.01
PRMT1-213	ENST00000529650	CHGA	P10645	457 aa	Known RBP	33.86	■■■■□ 3.01
PRMT1-213	ENST00000529650	DIP2A	Q14689	1571 aa		33.85	■■■■□ 3.01
PRMT1-213	ENST00000529650	HDGF	P51858	240 aa	Known RBP	33.85	■■■■□ 3.01
PRMT1-213	ENST00000529650	PHLPP1	O60346	1717 aa		33.83	■■■■□ 3.01
PRMT1-213	ENST00000529650	SPHKAP	Q2M3C7	1700 aa		33.82	■■■■□ 3
PRMT1-213	ENST00000529650	ITGAE	P38570	1179 aa		33.81	■■■■□ 3
PRMT1-213	ENST00000529650	NUP155	O75694	1391 aa		33.81	■■■■□ 3
PRMT1-213	ENST00000529650	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.8	■■■■□ 3
PRMT1-213	ENST00000529650	ADAMTS13	Q76LX8	1427 aa		33.79	■■■■□ 3
PRMT1-213	ENST00000529650	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.76	■■■□□ 2.99
PRMT1-213	ENST00000529650	TBX22	Q9Y458	520 aa		33.76	■■■□□ 2.99
PRMT1-213	ENST00000529650	TRPM2	O94759	1503 aa		33.74	■■■□□ 2.99
PRMT1-213	ENST00000529650	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.73	■■■□□ 2.99
PRMT1-213	ENST00000529650	RGS17	Q9UGC6	210 aa	Predicted RBP	33.73	■■■□□ 2.99
PRMT1-213	ENST00000529650	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.73	■■■□□ 2.99
PRMT1-213	ENST00000529650	SLAIN2	Q9P270	581 aa		33.71	■■■□□ 2.99
PRMT1-213	ENST00000529650	NCOA3	Q9Y6Q9	1424 aa		33.7	■■■□□ 2.99
PRMT1-213	ENST00000529650	PIK3R4	Q99570	1358 aa		33.7	■■■□□ 2.98
PRMT1-213	ENST00000529650	COL16A1	Q07092	1604 aa	Predicted RBP	33.69	■■■□□ 2.98
PRMT1-213	ENST00000529650	NRXN3	Q9Y4C0	1643 aa		33.68	■■■□□ 2.98
PRMT1-213	ENST00000529650	C14orf37	Q86TY3	774 aa		33.66	■■■□□ 2.98
PRMT1-213	ENST00000529650	XRN1	Q8IZH2	1706 aa	Known RBP	33.64	■■■□□ 2.98
PRMT1-213	ENST00000529650	SETBP1	Q9Y6X0	1596 aa		33.63	■■■□□ 2.97
PRMT1-213	ENST00000529650	JCAD	Q9P266	1359 aa		33.61	■■■□□ 2.97
PRMT1-213	ENST00000529650	CLTCL1	P53675	1640 aa		33.61	■■■□□ 2.97
PRMT1-213	ENST00000529650	PTPRU	Q92729	1446 aa		33.6	■■■□□ 2.97
PRMT1-213	ENST00000529650	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.59	■■■□□ 2.97
PRMT1-213	ENST00000529650	KIF1B	O60333	1816 aa		33.58	■■■□□ 2.97
PRMT1-213	ENST00000529650	RRBP1	Q9P2E9	1410 aa	Known RBP	33.56	■■■□□ 2.96
PRMT1-213	ENST00000529650	CADPS2	Q86UW7	1296 aa		33.55	■■■□□ 2.96
PRMT1-213	ENST00000529650	POTEA	Q6S8J7	498 aa		33.54	■■■□□ 2.96
PRMT1-213	ENST00000529650	C19orf44	Q9H6X5	657 aa		33.54	■■■□□ 2.96
PRMT1-213	ENST00000529650	AMOTL2	Q9Y2J4	779 aa		33.54	■■■□□ 2.96
PRMT1-213	ENST00000529650	SHPRH	Q149N8	1683 aa		33.54	■■■□□ 2.96
PRMT1-213	ENST00000529650	ATF3	P18847	181 aa		33.53	■■■□□ 2.96
PRMT1-213	ENST00000529650	NEXMIF	Q5QGS0	1516 aa		33.53	■■■□□ 2.96
PRMT1-213	ENST00000529650	ZNF326	Q5BKZ1	582 aa	Known RBP	33.51	■■■□□ 2.95
PRMT1-213	ENST00000529650	NAIP	Q13075	1403 aa		33.5	■■■□□ 2.95
PRMT1-213	ENST00000529650	SETD1A	O15047	1707 aa	Known RBP	33.5	■■■□□ 2.95
PRMT1-213	ENST00000529650	DCC	P43146	1447 aa		33.49	■■■□□ 2.95
PRMT1-213	ENST00000529650	LRP6	O75581	1613 aa		33.47	■■■□□ 2.95
PRMT1-213	ENST00000529650	NALCN	Q8IZF0	1738 aa		33.45	■■■□□ 2.94
PRMT1-213	ENST00000529650	MET	P08581	1390 aa		33.43	■■■□□ 2.94
PRMT1-213	ENST00000529650	ASXL1	Q8IXJ9	1541 aa		33.43	■■■□□ 2.94
PRMT1-213	ENST00000529650	NHSL1	Q5SYE7	1610 aa		33.42	■■■□□ 2.94
PRMT1-213	ENST00000529650	SPATA31A6	Q5VVP1	1343 aa		33.42	■■■□□ 2.94
PRMT1-213	ENST00000529650	BRINP3	Q76B58	766 aa		33.39	■■■□□ 2.94
PRMT1-213	ENST00000529650	MST1R	Q04912	1400 aa		33.38	■■■□□ 2.93
PRMT1-213	ENST00000529650	ADGRL3	Q9HAR2	1447 aa		33.36	■■■□□ 2.93
PRMT1-213	ENST00000529650	HFM1	A2PYH4	1435 aa		33.36	■■■□□ 2.93
PRMT1-213	ENST00000529650	MEX3C	Q5U5Q3	659 aa	Known RBP	33.35	■■■□□ 2.93
PRMT1-213	ENST00000529650	PPL	O60437	1756 aa		33.33	■■■□□ 2.93
PRMT1-213	ENST00000529650	TRIM52	Q96A61	297 aa		33.3	■■■□□ 2.92
PRMT1-213	ENST00000529650	SETD5	Q9C0A6	1442 aa		33.27	■■■□□ 2.92
PRMT1-213	ENST00000529650	PTCH1	Q13635	1447 aa		33.26	■■■□□ 2.91
PRMT1-213	ENST00000529650	ZNF772	Q68DY9	489 aa	Predicted RBP	33.23	■■■□□ 2.91
PRMT1-213	ENST00000529650	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.21	■■■□□ 2.91
PRMT1-213	ENST00000529650	NUTM2E	B1AL46	878 aa	Predicted RBP	33.21	■■■□□ 2.91
PRMT1-213	ENST00000529650	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.21	■■■□□ 2.91
PRMT1-213	ENST00000529650	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.21	■■■□□ 2.91
PRMT1-213	ENST00000529650	VGF	O15240	615 aa	Predicted RBP	33.2	■■■□□ 2.91
PRMT1-213	ENST00000529650	LAMC1	P11047	1609 aa		33.19	■■■□□ 2.9
PRMT1-213	ENST00000529650	PRAG1	Q86YV5	1406 aa		33.19	■■■□□ 2.9
PRMT1-213	ENST00000529650	ROBO2	Q9HCK4	1378 aa		33.17	■■■□□ 2.9
PRMT1-213	ENST00000529650	C1orf167	Q5SNV9	1468 aa		33.17	■■■□□ 2.9
PRMT1-213	ENST00000529650	RPGRIP1L	Q68CZ1	1315 aa		33.16	■■■□□ 2.9
PRMT1-213	ENST00000529650	DDX17	Q92841	729 aa	Known RBP	33.14	■■■□□ 2.9
PRMT1-213	ENST00000529650	LRRC59	Q96AG4	307 aa	Known RBP	33.14	■■■□□ 2.9
PRMT1-213	ENST00000529650	IFT172	Q9UG01	1749 aa		33.14	■■■□□ 2.89
PRMT1-213	ENST00000529650	PNPLA6	Q8IY17	1366 aa		33.13	■■■□□ 2.89
PRMT1-213	ENST00000529650	AFF2	P51816	1311 aa		33.09	■■■□□ 2.89
PRMT1-213	ENST00000529650	FOXD1	Q16676	465 aa		33.07	■■■□□ 2.88
PRMT1-213	ENST00000529650	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.06	■■■□□ 2.88
PRMT1-213	ENST00000529650	CDC42BPG	Q6DT37	1551 aa		33.06	■■■□□ 2.88
PRMT1-213	ENST00000529650	CCDC144A	A2RUR9	1427 aa		33.06	■■■□□ 2.88
PRMT1-213	ENST00000529650	RXRB	P28702	533 aa		33.05	■■■□□ 2.88
PRMT1-213	ENST00000529650	KNDC1	Q76NI1	1749 aa		33.02	■■■□□ 2.88
PRMT1-213	ENST00000529650	C8orf37	Q96NL8	207 aa		33.01	■■■□□ 2.87
PRMT1-213	ENST00000529650	ORAI2	Q96SN7	254 aa		33.01	■■■□□ 2.87
PRMT1-213	ENST00000529650	SPATA31E1	Q6ZUB1	1445 aa		33	■■■□□ 2.87
PRMT1-213	ENST00000529650	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.98	■■■□□ 2.87
PRMT1-213	ENST00000529650	SOS2	Q07890	1332 aa	Predicted RBP	32.98	■■■□□ 2.87
PRMT1-213	ENST00000529650	ADGRF5	Q8IZF2	1346 aa		32.98	■■■□□ 2.87
PRMT1-213	ENST00000529650	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.96	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms