RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
NUP98-216ENST00000529379 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
NUP98-216ENST00000529379 TMEM134Q9H6X4 195 aa10.8□□□□□ -0.68
NUP98-216ENST00000529379 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
NUP98-216ENST00000529379 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
NUP98-216ENST00000529379 SSTR3P32745 418 aaPredicted RBP10.79□□□□□ -0.68
NUP98-216ENST00000529379 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
NUP98-216ENST00000529379 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
NUP98-216ENST00000529379 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
NUP98-216ENST00000529379 LAPTM4BQ86VI4 370 aa10.78□□□□□ -0.68
NUP98-216ENST00000529379 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
NUP98-216ENST00000529379 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
NUP98-216ENST00000529379 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
NUP98-216ENST00000529379 PLEKHG3A1L390 1219 aa10.75□□□□□ -0.69
NUP98-216ENST00000529379 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
NUP98-216ENST00000529379 SAMD7Q7Z3H4 446 aa10.73□□□□□ -0.69
NUP98-216ENST00000529379 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
NUP98-216ENST00000529379 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
NUP98-216ENST00000529379 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
NUP98-216ENST00000529379 CD46P15529 392 aa10.71□□□□□ -0.69
NUP98-216ENST00000529379 SULF1Q8IWU6 871 aa10.71□□□□□ -0.69
NUP98-216ENST00000529379 STAC3Q96MF2 364 aa10.7□□□□□ -0.7
NUP98-216ENST00000529379 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
NUP98-216ENST00000529379 SLC10A3P09131 477 aa10.68□□□□□ -0.7
NUP98-216ENST00000529379 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
NUP98-216ENST00000529379 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
NUP98-216ENST00000529379 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
NUP98-216ENST00000529379 SLF2Q8IX21 1173 aa10.66□□□□□ -0.7
NUP98-216ENST00000529379 RNF40O75150 1001 aa10.65□□□□□ -0.7
NUP98-216ENST00000529379 LRCH3Q96II8 777 aa10.65□□□□□ -0.7
NUP98-216ENST00000529379 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.65□□□□□ -0.7
NUP98-216ENST00000529379 WNT2BQ93097 391 aa10.64□□□□□ -0.71
NUP98-216ENST00000529379 BCAMP50895 628 aa10.63□□□□□ -0.71
NUP98-216ENST00000529379 ANKK1Q8NFD2 765 aa10.63□□□□□ -0.71
NUP98-216ENST00000529379 SOWAHBA6NEL2 793 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 GCGRP47871 477 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 SLC4A3P48751 1232 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 THSD4Q6ZMP0 1018 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 SPIRE2Q8WWL2 714 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
NUP98-216ENST00000529379 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
NUP98-216ENST00000529379 CFHP08603 1231 aa10.59□□□□□ -0.71
NUP98-216ENST00000529379 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
NUP98-216ENST00000529379 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
NUP98-216ENST00000529379 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
NUP98-216ENST00000529379 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
NUP98-216ENST00000529379 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
NUP98-216ENST00000529379 HPS5Q9UPZ3 1129 aa10.58□□□□□ -0.72
NUP98-216ENST00000529379 KDM4AO75164 1064 aa10.57□□□□□ -0.72
NUP98-216ENST00000529379 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
NUP98-216ENST00000529379 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
NUP98-216ENST00000529379 PPP4CP60510 307 aa10.56□□□□□ -0.72
NUP98-216ENST00000529379 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
NUP98-216ENST00000529379 TSR3Q9UJK0 312 aaKnown RBP10.56□□□□□ -0.72
NUP98-216ENST00000529379 MOXD2PA6NHM9 499 aa10.55□□□□□ -0.72
NUP98-216ENST00000529379 PTPN5P54829 565 aa10.55□□□□□ -0.72
NUP98-216ENST00000529379 NDUFV2P19404 249 aa10.54□□□□□ -0.72
NUP98-216ENST00000529379 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
NUP98-216ENST00000529379 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
NUP98-216ENST00000529379 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
NUP98-216ENST00000529379 HOXA2O43364 376 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
NUP98-216ENST00000529379 FUT2Q10981 343 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 HLA-CQ95604 372 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
NUP98-216ENST00000529379 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
NUP98-216ENST00000529379 APLP1P51693 650 aa10.52□□□□□ -0.73
NUP98-216ENST00000529379 USP46P62068 366 aa10.52□□□□□ -0.73
NUP98-216ENST00000529379 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
NUP98-216ENST00000529379 SPTLC1O15269 473 aa10.51□□□□□ -0.73
NUP98-216ENST00000529379 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
NUP98-216ENST00000529379 GUCA2AQ02747 115 aa10.5□□□□□ -0.73
NUP98-216ENST00000529379 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
NUP98-216ENST00000529379 ATP6V1AP38606 617 aa10.48□□□□□ -0.73
NUP98-216ENST00000529379 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
NUP98-216ENST00000529379 FBXO31Q5XUX0 539 aaPredicted RBP10.48□□□□□ -0.73
NUP98-216ENST00000529379 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
NUP98-216ENST00000529379 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
NUP98-216ENST00000529379 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
NUP98-216ENST00000529379 FDX1P10109 184 aa10.47□□□□□ -0.73
NUP98-216ENST00000529379 GJA5P36382 358 aa10.47□□□□□ -0.73
NUP98-216ENST00000529379 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
NUP98-216ENST00000529379 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
NUP98-216ENST00000529379 PCDHGC3Q9UN70 934 aa10.47□□□□□ -0.73
NUP98-216ENST00000529379 GRIPAP1Q4V328 841 aa10.46□□□□□ -0.73
NUP98-216ENST00000529379 MORN1Q5T089 497 aa10.45□□□□□ -0.74
NUP98-216ENST00000529379 QPCTQ16769 361 aa10.44□□□□□ -0.74
NUP98-216ENST00000529379 PCDHB3Q9Y5E6 796 aa10.44□□□□□ -0.74
NUP98-216ENST00000529379 SLC27A5Q9Y2P5 690 aa10.43□□□□□ -0.74
NUP98-216ENST00000529379 LILRB3O75022 631 aa10.42□□□□□ -0.74
NUP98-216ENST00000529379 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
NUP98-216ENST00000529379 CABLES1Q8TDN4 633 aa10.42□□□□□ -0.74
NUP98-216ENST00000529379 PLA2G2EQ9NZK7 142 aa10.42□□□□□ -0.74
NUP98-216ENST00000529379 HRCP23327 699 aa10.41□□□□□ -0.74
NUP98-216ENST00000529379 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
NUP98-216ENST00000529379 BLOC1S3Q6QNY0 202 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms