RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.1
LTBP3-211ENST00000528966 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
LTBP3-211ENST00000528966 DAPK1P53355 1430 aa28.15■■■□□ 2.1
LTBP3-211ENST00000528966 MYO5BQ9ULV0 1848 aa28.14■■■□□ 2.1
LTBP3-211ENST00000528966 BCANQ96GW7 911 aa28.14■■■□□ 2.1
LTBP3-211ENST00000528966 ZFYVE9O95405 1425 aa28.13■■■□□ 2.09
LTBP3-211ENST00000528966 FGD6Q6ZV73 1430 aa28.13■■■□□ 2.09
LTBP3-211ENST00000528966 SPATA31A6Q5VVP1 1343 aa28.13■■■□□ 2.09
LTBP3-211ENST00000528966 TRIM52Q96A61 297 aa28.11■■■□□ 2.09
LTBP3-211ENST00000528966 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
LTBP3-211ENST00000528966 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
LTBP3-211ENST00000528966 ZNF772Q68DY9 489 aaPredicted RBP28.1■■■□□ 2.09
LTBP3-211ENST00000528966 SLC52A1Q9NWF4 448 aa28.1■■■□□ 2.09
LTBP3-211ENST00000528966 AHDC1Q5TGY3 1603 aaPredicted RBP28.09■■■□□ 2.09
LTBP3-211ENST00000528966 MEX3CQ5U5Q3 659 aaKnown RBP28.08■■■□□ 2.09
LTBP3-211ENST00000528966 NCOA3Q9Y6Q9 1424 aa28.06■■■□□ 2.08
LTBP3-211ENST00000528966 GCC2Q8IWJ2 1684 aa28.06■■■□□ 2.08
LTBP3-211ENST00000528966 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.06■■■□□ 2.08
LTBP3-211ENST00000528966 SRCAPQ6ZRS2 3230 aa28.05■■■□□ 2.08
LTBP3-211ENST00000528966 ANKRD30AQ9BXX3 1397 aa28.05■■■□□ 2.08
LTBP3-211ENST00000528966 RIMS2Q9UQ26 1411 aa28.04■■■□□ 2.08
LTBP3-211ENST00000528966 CHIC2Q9UKJ5 165 aa28.04■■■□□ 2.08
LTBP3-211ENST00000528966 TMEM131LA2VDJ0 1609 aa28.03■■■□□ 2.08
LTBP3-211ENST00000528966 RPRD2Q5VT52 1461 aaKnown RBP28.02■■■□□ 2.08
LTBP3-211ENST00000528966 DIP2AQ14689 1571 aa28■■■□□ 2.07
LTBP3-211ENST00000528966 PPP1R15AO75807 674 aaPredicted RBP28■■■□□ 2.07
LTBP3-211ENST00000528966 TBX22Q9Y458 520 aa28■■■□□ 2.07
LTBP3-211ENST00000528966 RXRBP28702 533 aa27.99■■■□□ 2.07
LTBP3-211ENST00000528966 C14orf37Q86TY3 774 aa27.99■■■□□ 2.07
LTBP3-211ENST00000528966 CDK12Q9NYV4 1490 aaPredicted RBP27.98■■■□□ 2.07
LTBP3-211ENST00000528966 CADPS2Q86UW7 1296 aa27.97■■■□□ 2.07
LTBP3-211ENST00000528966 ADAMTS13Q76LX8 1427 aa27.97■■■□□ 2.07
LTBP3-211ENST00000528966 C19orf44Q9H6X5 657 aa27.96■■■□□ 2.07
LTBP3-211ENST00000528966 HDGFP51858 240 aaKnown RBP27.94■■■□□ 2.06
LTBP3-211ENST00000528966 ATF3P18847 181 aa27.93■■■□□ 2.06
LTBP3-211ENST00000528966 ADGRL2O95490 1459 aa27.93■■■□□ 2.06
LTBP3-211ENST00000528966 BRINP3Q76B58 766 aa27.92■■■□□ 2.06
LTBP3-211ENST00000528966 NUTM2BA6NNL0 878 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-211ENST00000528966 NUTM2EB1AL46 878 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-211ENST00000528966 NUTM2AQ8IVF1 878 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-211ENST00000528966 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
LTBP3-211ENST00000528966 PIK3R4Q99570 1358 aa27.89■■■□□ 2.06
LTBP3-211ENST00000528966 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
LTBP3-211ENST00000528966 AFF2P51816 1311 aa27.89■■■□□ 2.05
LTBP3-211ENST00000528966 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.88■■■□□ 2.05
LTBP3-211ENST00000528966 ANKRD50Q9ULJ7 1429 aa27.86■■■□□ 2.05
LTBP3-211ENST00000528966 ASXL1Q8IXJ9 1541 aa27.86■■■□□ 2.05
LTBP3-211ENST00000528966 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
LTBP3-211ENST00000528966 RGS12O14924 1447 aa27.84■■■□□ 2.05
LTBP3-211ENST00000528966 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
LTBP3-211ENST00000528966 TRPM2O94759 1503 aa27.84■■■□□ 2.05
LTBP3-211ENST00000528966 CHGAP10645 457 aaKnown RBP27.84■■■□□ 2.05
LTBP3-211ENST00000528966 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
LTBP3-211ENST00000528966 DCCP43146 1447 aa27.83■■■□□ 2.05
LTBP3-211ENST00000528966 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
LTBP3-211ENST00000528966 E9PCH4 1651 aa27.81■■■□□ 2.04
LTBP3-211ENST00000528966 UNC13BO14795 1591 aa27.8■■■□□ 2.04
LTBP3-211ENST00000528966 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
LTBP3-211ENST00000528966 MST1RQ04912 1400 aa27.78■■■□□ 2.04
LTBP3-211ENST00000528966 APLP2Q06481 763 aa27.76■■■□□ 2.03
LTBP3-211ENST00000528966 NRXN3Q9Y4C0 1643 aa27.75■■■□□ 2.03
LTBP3-211ENST00000528966 RBM6P78332 1123 aaKnown RBP27.75■■■□□ 2.03
LTBP3-211ENST00000528966 C8orf37Q96NL8 207 aa27.75■■■□□ 2.03
LTBP3-211ENST00000528966 QTRT2Q9H974 415 aaKnown RBP27.75■■■□□ 2.03
LTBP3-211ENST00000528966 LRRC59Q96AG4 307 aaKnown RBP27.73■■■□□ 2.03
LTBP3-211ENST00000528966 PNPLA6Q8IY17 1366 aa27.73■■■□□ 2.03
LTBP3-211ENST00000528966 DDX17Q92841 729 aaKnown RBP27.71■■■□□ 2.03
LTBP3-211ENST00000528966 FAM50AQ14320 339 aaKnown RBP27.69■■■□□ 2.02
LTBP3-211ENST00000528966 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
LTBP3-211ENST00000528966 IQGAP3Q86VI3 1631 aa27.68■■■□□ 2.02
LTBP3-211ENST00000528966 EP400Q96L91 3159 aa27.66■■■□□ 2.02
LTBP3-211ENST00000528966 NALCNQ8IZF0 1738 aa27.65■■■□□ 2.02
LTBP3-211ENST00000528966 ADGRL3Q9HAR2 1447 aa27.64■■■□□ 2.02
LTBP3-211ENST00000528966 METP08581 1390 aa27.63■■■□□ 2.01
LTBP3-211ENST00000528966 ATAD2Q6PL18 1390 aa27.62■■■□□ 2.01
LTBP3-211ENST00000528966 ADAMTS2O95450 1211 aa27.61■■■□□ 2.01
LTBP3-211ENST00000528966 NGLY1Q96IV0 654 aa27.61■■■□□ 2.01
LTBP3-211ENST00000528966 LAMC1P11047 1609 aa27.59■■■□□ 2.01
LTBP3-211ENST00000528966 C1orf167Q5SNV9 1468 aa27.55■■■□□ 2
LTBP3-211ENST00000528966 USP21Q9UK80 565 aa27.54■■■□□ 2
LTBP3-211ENST00000528966 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
LTBP3-211ENST00000528966 NUP155O75694 1391 aa27.53■■■□□ 2
LTBP3-211ENST00000528966 ROCK1Q13464 1354 aa27.51■■□□□ 1.99
LTBP3-211ENST00000528966 ZRANB1Q9UGI0 708 aa27.51■■□□□ 1.99
LTBP3-211ENST00000528966 TRPC5Q9UL62 973 aaPredicted RBP27.51■■□□□ 1.99
LTBP3-211ENST00000528966 SOS2Q07890 1332 aaPredicted RBP27.5■■□□□ 1.99
LTBP3-211ENST00000528966 FNBP4Q8N3X1 1017 aaPredicted RBP27.5■■□□□ 1.99
LTBP3-211ENST00000528966 ATRNO75882 1429 aa27.5■■□□□ 1.99
LTBP3-211ENST00000528966 PTCH1Q13635 1447 aa27.49■■□□□ 1.99
LTBP3-211ENST00000528966 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
LTBP3-211ENST00000528966 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
LTBP3-211ENST00000528966 COL22A1Q8NFW1 1626 aaPredicted RBP27.47■■□□□ 1.99
LTBP3-211ENST00000528966 ORAI2Q96SN7 254 aa27.46■■□□□ 1.99
LTBP3-211ENST00000528966 FOXD1Q16676 465 aa27.44■■□□□ 1.98
LTBP3-211ENST00000528966 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
LTBP3-211ENST00000528966 MYOM2P54296 1465 aa27.4■■□□□ 1.98
LTBP3-211ENST00000528966 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
LTBP3-211ENST00000528966 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
LTBP3-211ENST00000528966 MARF1Q9Y4F3 1742 aaKnown RBP27.39■■□□□ 1.98
LTBP3-211ENST00000528966 CCDC125Q86Z20 511 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms