RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SLC26A8Q96RN1 970 aa23.98■■□□□ 1.43
CTSB-215ENST00000528965 NWD1Q149M9 1564 aa23.98■■□□□ 1.43
CTSB-215ENST00000528965 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
CTSB-215ENST00000528965 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
CTSB-215ENST00000528965 ZFYVE9O95405 1425 aa23.96■■□□□ 1.43
CTSB-215ENST00000528965 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
CTSB-215ENST00000528965 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.43
CTSB-215ENST00000528965 RIMS2Q9UQ26 1411 aa23.95■■□□□ 1.42
CTSB-215ENST00000528965 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
CTSB-215ENST00000528965 TMEM131LA2VDJ0 1609 aa23.94■■□□□ 1.42
CTSB-215ENST00000528965 FAM135BQ49AJ0 1406 aa23.93■■□□□ 1.42
CTSB-215ENST00000528965 E9PCH4 1651 aa23.92■■□□□ 1.42
CTSB-215ENST00000528965 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.92■■□□□ 1.42
CTSB-215ENST00000528965 MSH6P52701 1360 aa23.91■■□□□ 1.42
CTSB-215ENST00000528965 MYO5BQ9ULV0 1848 aa23.9■■□□□ 1.42
CTSB-215ENST00000528965 NUP155O75694 1391 aa23.9■■□□□ 1.42
CTSB-215ENST00000528965 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
CTSB-215ENST00000528965 ITGAEP38570 1179 aa23.88■■□□□ 1.41
CTSB-215ENST00000528965 DIP2AQ14689 1571 aa23.87■■□□□ 1.41
CTSB-215ENST00000528965 ROBO1Q9Y6N7 1651 aa23.85■■□□□ 1.41
CTSB-215ENST00000528965 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.41
CTSB-215ENST00000528965 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
CTSB-215ENST00000528965 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
CTSB-215ENST00000528965 NCOA3Q9Y6Q9 1424 aa23.81■■□□□ 1.4
CTSB-215ENST00000528965 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
CTSB-215ENST00000528965 ADAMTS13Q76LX8 1427 aa23.78■■□□□ 1.4
CTSB-215ENST00000528965 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
CTSB-215ENST00000528965 TRPM2O94759 1503 aa23.78■■□□□ 1.4
CTSB-215ENST00000528965 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
CTSB-215ENST00000528965 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
CTSB-215ENST00000528965 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
CTSB-215ENST00000528965 SPHKAPQ2M3C7 1700 aa23.76■■□□□ 1.39
CTSB-215ENST00000528965 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
CTSB-215ENST00000528965 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
CTSB-215ENST00000528965 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
CTSB-215ENST00000528965 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
CTSB-215ENST00000528965 JCADQ9P266 1359 aa23.68■■□□□ 1.38
CTSB-215ENST00000528965 ATF3P18847 181 aa23.68■■□□□ 1.38
CTSB-215ENST00000528965 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
CTSB-215ENST00000528965 C19orf44Q9H6X5 657 aa23.68■■□□□ 1.38
CTSB-215ENST00000528965 RGS17Q9UGC6 210 aaPredicted RBP23.65■■□□□ 1.38
CTSB-215ENST00000528965 AMOTL2Q9Y2J4 779 aa23.65■■□□□ 1.38
CTSB-215ENST00000528965 NAIPQ13075 1403 aa23.65■■□□□ 1.38
CTSB-215ENST00000528965 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.38
CTSB-215ENST00000528965 DCCP43146 1447 aa23.64■■□□□ 1.37
CTSB-215ENST00000528965 COL16A1Q07092 1604 aaPredicted RBP23.63■■□□□ 1.37
CTSB-215ENST00000528965 NRXN3Q9Y4C0 1643 aa23.63■■□□□ 1.37
CTSB-215ENST00000528965 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
CTSB-215ENST00000528965 PTPRUQ92729 1446 aa23.63■■□□□ 1.37
CTSB-215ENST00000528965 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
CTSB-215ENST00000528965 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
CTSB-215ENST00000528965 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
CTSB-215ENST00000528965 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
CTSB-215ENST00000528965 SPATA31A6Q5VVP1 1343 aa23.58■■□□□ 1.36
CTSB-215ENST00000528965 KIF1BO60333 1816 aa23.57■■□□□ 1.36
CTSB-215ENST00000528965 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
CTSB-215ENST00000528965 METP08581 1390 aa23.54■■□□□ 1.36
CTSB-215ENST00000528965 POTEAQ6S8J7 498 aa23.54■■□□□ 1.36
CTSB-215ENST00000528965 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
CTSB-215ENST00000528965 ADGRL3Q9HAR2 1447 aa23.52■■□□□ 1.36
CTSB-215ENST00000528965 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
CTSB-215ENST00000528965 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
CTSB-215ENST00000528965 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
CTSB-215ENST00000528965 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
CTSB-215ENST00000528965 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
CTSB-215ENST00000528965 MST1RQ04912 1400 aa23.5■■□□□ 1.35
CTSB-215ENST00000528965 LRP6O75581 1613 aa23.48■■□□□ 1.35
CTSB-215ENST00000528965 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
CTSB-215ENST00000528965 PTCH1Q13635 1447 aa23.48■■□□□ 1.35
CTSB-215ENST00000528965 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
CTSB-215ENST00000528965 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
CTSB-215ENST00000528965 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
CTSB-215ENST00000528965 SETD5Q9C0A6 1442 aa23.43■■□□□ 1.34
CTSB-215ENST00000528965 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
CTSB-215ENST00000528965 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
CTSB-215ENST00000528965 PPLO60437 1756 aa23.4■■□□□ 1.34
CTSB-215ENST00000528965 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
CTSB-215ENST00000528965 CCDC144AA2RUR9 1427 aa23.39■■□□□ 1.33
CTSB-215ENST00000528965 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
CTSB-215ENST00000528965 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
CTSB-215ENST00000528965 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
CTSB-215ENST00000528965 ROBO2Q9HCK4 1378 aa23.37■■□□□ 1.33
CTSB-215ENST00000528965 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
CTSB-215ENST00000528965 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.32
CTSB-215ENST00000528965 PNPLA6Q8IY17 1366 aa23.32■■□□□ 1.32
CTSB-215ENST00000528965 LAMC1P11047 1609 aa23.3■■□□□ 1.32
CTSB-215ENST00000528965 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
CTSB-215ENST00000528965 FOXD1Q16676 465 aa23.3■■□□□ 1.32
CTSB-215ENST00000528965 RXRBP28702 533 aa23.29■■□□□ 1.32
CTSB-215ENST00000528965 CDC42BPGQ6DT37 1551 aa23.29■■□□□ 1.32
CTSB-215ENST00000528965 AFF2P51816 1311 aa23.29■■□□□ 1.32
CTSB-215ENST00000528965 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
CTSB-215ENST00000528965 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
CTSB-215ENST00000528965 MPHOSPH9Q99550 1183 aa23.28■■□□□ 1.32
CTSB-215ENST00000528965 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CTSB-215ENST00000528965 ADGRF5Q8IZF2 1346 aa23.25■■□□□ 1.31
CTSB-215ENST00000528965 IFT172Q9UG01 1749 aa23.25■■□□□ 1.31
CTSB-215ENST00000528965 TECPR2O15040 1411 aa23.25■■□□□ 1.31
CTSB-215ENST00000528965 RGL3Q3MIN7 710 aa23.24■■□□□ 1.31
CTSB-215ENST00000528965 C8orf37Q96NL8 207 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms