RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
LTBP3-210ENST00000528516 PANK2Q9BZ23 570 aa22.66■■□□□ 1.22
LTBP3-210ENST00000528516 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
LTBP3-210ENST00000528516 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
LTBP3-210ENST00000528516 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
LTBP3-210ENST00000528516 SPAG9O60271 1321 aaKnown RBP22.65■■□□□ 1.22
LTBP3-210ENST00000528516 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
LTBP3-210ENST00000528516 RPRD2Q5VT52 1461 aaKnown RBP22.65■■□□□ 1.22
LTBP3-210ENST00000528516 KIF14Q15058 1648 aa22.65■■□□□ 1.22
LTBP3-210ENST00000528516 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.22
LTBP3-210ENST00000528516 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.21
LTBP3-210ENST00000528516 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
LTBP3-210ENST00000528516 XRCC6P12956 609 aaKnown RBP eCLIP22.62■■□□□ 1.21
LTBP3-210ENST00000528516 CYB5RLQ6IPT4 315 aa22.62■■□□□ 1.21
LTBP3-210ENST00000528516 AFAP1Q8N556 730 aa22.62■■□□□ 1.21
LTBP3-210ENST00000528516 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
LTBP3-210ENST00000528516 PODXL2Q9NZ53 605 aa22.62■■□□□ 1.21
LTBP3-210ENST00000528516 MFAP1P55081 439 aaKnown RBP22.61■■□□□ 1.21
LTBP3-210ENST00000528516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
LTBP3-210ENST00000528516 TCOF1Q13428 1488 aaKnown RBP22.6■■□□□ 1.21
LTBP3-210ENST00000528516 TMEM132EQ6IEE7 984 aa22.59■■□□□ 1.21
LTBP3-210ENST00000528516 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
LTBP3-210ENST00000528516 ANKRD50Q9ULJ7 1429 aa22.58■■□□□ 1.21
LTBP3-210ENST00000528516 ARID3AQ99856 593 aa22.58■■□□□ 1.21
LTBP3-210ENST00000528516 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.2
LTBP3-210ENST00000528516 SMC4Q9NTJ3 1288 aa22.57■■□□□ 1.2
LTBP3-210ENST00000528516 CLCN1P35523 988 aa22.57■■□□□ 1.2
LTBP3-210ENST00000528516 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
LTBP3-210ENST00000528516 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
LTBP3-210ENST00000528516 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
LTBP3-210ENST00000528516 A0A0G2JS52 829 aa22.54■■□□□ 1.2
LTBP3-210ENST00000528516 HSP90AB1P08238 724 aaKnown RBP22.54■■□□□ 1.2
LTBP3-210ENST00000528516 CENPJQ9HC77 1338 aaPredicted RBP22.54■■□□□ 1.2
LTBP3-210ENST00000528516 PANK1Q8TE04 598 aa22.54■■□□□ 1.2
LTBP3-210ENST00000528516 ABCA8O94911 1581 aa22.54■■□□□ 1.2
LTBP3-210ENST00000528516 KANK1Q14678 1352 aa22.53■■□□□ 1.2
LTBP3-210ENST00000528516 SEC24BO95487 1268 aa22.53■■□□□ 1.2
LTBP3-210ENST00000528516 TEX14Q8IWB6 1497 aa22.52■■□□□ 1.2
LTBP3-210ENST00000528516 KDM6BO15054 1643 aa22.52■■□□□ 1.2
LTBP3-210ENST00000528516 ESPNB1AK53 854 aa22.51■■□□□ 1.19
LTBP3-210ENST00000528516 TRAK2O60296 914 aa22.51■■□□□ 1.19
LTBP3-210ENST00000528516 CFAP70Q5T0N1 1121 aa22.51■■□□□ 1.19
LTBP3-210ENST00000528516 ROCK1Q13464 1354 aa22.51■■□□□ 1.19
LTBP3-210ENST00000528516 RSPH4AQ5TD94 716 aa22.51■■□□□ 1.19
LTBP3-210ENST00000528516 MRE11P49959 708 aa22.5■■□□□ 1.19
LTBP3-210ENST00000528516 A0A0U1RQG5 324 aaPredicted RBP22.49■■□□□ 1.19
LTBP3-210ENST00000528516 MCM4P33991 863 aa22.49■■□□□ 1.19
LTBP3-210ENST00000528516 BCAR3O75815 825 aa22.47■■□□□ 1.19
LTBP3-210ENST00000528516 PLCB2Q00722 1185 aa22.47■■□□□ 1.19
LTBP3-210ENST00000528516 MINK1Q8N4C8 1332 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-210ENST00000528516 TBC1D2Q9BYX2 928 aa22.44■■□□□ 1.18
LTBP3-210ENST00000528516 GRPEL1Q9HAV7 217 aa22.44■■□□□ 1.18
LTBP3-210ENST00000528516 IGHDP01880 384 aa22.44■■□□□ 1.18
LTBP3-210ENST00000528516 RBM10P98175 930 aaKnown RBP22.44■■□□□ 1.18
LTBP3-210ENST00000528516 DUSP27Q5VZP5 1158 aa22.42■■□□□ 1.18
LTBP3-210ENST00000528516 HSCBQ8IWL3 235 aa22.42■■□□□ 1.18
LTBP3-210ENST00000528516 NOL8Q76FK4 1167 aaKnown RBP22.41■■□□□ 1.18
LTBP3-210ENST00000528516 RWDD1Q9H446 243 aaPredicted RBP22.41■■□□□ 1.18
LTBP3-210ENST00000528516 CHMP5Q9NZZ3 219 aa22.41■■□□□ 1.18
LTBP3-210ENST00000528516 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
LTBP3-210ENST00000528516 ABCC2Q92887 1545 aa22.4■■□□□ 1.18
LTBP3-210ENST00000528516 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
LTBP3-210ENST00000528516 FOXD4L5Q5VV16 416 aaPredicted RBP22.4■■□□□ 1.18
LTBP3-210ENST00000528516 FOXD4L4Q8WXT5 416 aaPredicted RBP22.4■■□□□ 1.18
LTBP3-210ENST00000528516 FAM13BQ9NYF5 915 aa22.4■■□□□ 1.18
LTBP3-210ENST00000528516 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
LTBP3-210ENST00000528516 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.18
LTBP3-210ENST00000528516 KIAA1211Q6ZU35 1233 aa22.39■■□□□ 1.17
LTBP3-210ENST00000528516 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
LTBP3-210ENST00000528516 ITSN2Q9NZM3 1697 aa22.38■■□□□ 1.17
LTBP3-210ENST00000528516 SLC4A10Q6U841 1118 aa22.38■■□□□ 1.17
LTBP3-210ENST00000528516 GOLGA6L22H0YM25 854 aa22.38■■□□□ 1.17
LTBP3-210ENST00000528516 TPM2P07951 284 aa22.37■■□□□ 1.17
LTBP3-210ENST00000528516 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
LTBP3-210ENST00000528516 BCORL1Q5H9F3 1711 aa22.36■■□□□ 1.17
LTBP3-210ENST00000528516 DDX11L8A8MPP1 907 aa22.36■■□□□ 1.17
LTBP3-210ENST00000528516 PPP2R1AP30153 589 aa22.36■■□□□ 1.17
LTBP3-210ENST00000528516 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
LTBP3-210ENST00000528516 FOXD4L6Q3SYB3 417 aaPredicted RBP22.35■■□□□ 1.17
LTBP3-210ENST00000528516 FOXD4L3Q6VB84 417 aaPredicted RBP22.35■■□□□ 1.17
LTBP3-210ENST00000528516 SYCP2Q9BX26 1530 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-210ENST00000528516 KIAA1107Q9UPP5 1409 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 HDGFL2Q7Z4V5 671 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-210ENST00000528516 PARD3Q8TEW0 1356 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 MTHFSP49914 203 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 PDCL3Q9H2J4 239 aa22.34■■□□□ 1.17
LTBP3-210ENST00000528516 USP19O94966 1318 aa22.33■■□□□ 1.16
LTBP3-210ENST00000528516 HMOX1P09601 288 aa22.32■■□□□ 1.16
LTBP3-210ENST00000528516 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
LTBP3-210ENST00000528516 E9PSI1 815 aa22.31■■□□□ 1.16
LTBP3-210ENST00000528516 PTMAP06454 111 aaKnown RBP22.3■■□□□ 1.16
LTBP3-210ENST00000528516 FSD2A1L4K1 749 aa22.3■■□□□ 1.16
LTBP3-210ENST00000528516 ANKRD45Q5TZF3 282 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 TCP11L2Q8N4U5 519 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 PMFBP1Q8TBY8 1022 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 TSR2Q969E8 191 aaKnown RBP22.29■■□□□ 1.16
LTBP3-210ENST00000528516 C22orf23Q9BZE7 217 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms