RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 IDI1Q13907 227 aa18.06■□□□□ 0.48
RBM39-243ENST00000528062 ANP32EQ9BTT0 268 aa18.06■□□□□ 0.48
RBM39-243ENST00000528062 SPATA31E1Q6ZUB1 1445 aa18.05■□□□□ 0.48
RBM39-243ENST00000528062 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
RBM39-243ENST00000528062 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
RBM39-243ENST00000528062 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
RBM39-243ENST00000528062 CEP170BQ9Y4F5 1589 aaPredicted RBP18.03■□□□□ 0.48
RBM39-243ENST00000528062 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
RBM39-243ENST00000528062 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
RBM39-243ENST00000528062 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
RBM39-243ENST00000528062 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
RBM39-243ENST00000528062 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
RBM39-243ENST00000528062 RBM19Q9Y4C8 960 aaKnown RBP18■□□□□ 0.47
RBM39-243ENST00000528062 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
RBM39-243ENST00000528062 PPLO60437 1756 aa17.98■□□□□ 0.47
RBM39-243ENST00000528062 NEXMIFQ5QGS0 1516 aa17.96■□□□□ 0.47
RBM39-243ENST00000528062 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
RBM39-243ENST00000528062 LMTK3Q96Q04 1460 aa17.94■□□□□ 0.46
RBM39-243ENST00000528062 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
RBM39-243ENST00000528062 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
RBM39-243ENST00000528062 CCDC184Q52MB2 194 aa17.93■□□□□ 0.46
RBM39-243ENST00000528062 C11orf95C9JLR9 678 aaPredicted RBP17.93■□□□□ 0.46
RBM39-243ENST00000528062 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
RBM39-243ENST00000528062 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
RBM39-243ENST00000528062 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
RBM39-243ENST00000528062 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
RBM39-243ENST00000528062 SLIT1O75093 1534 aa17.91■□□□□ 0.46
RBM39-243ENST00000528062 ARHGAP23Q9P227 1491 aa17.91■□□□□ 0.46
RBM39-243ENST00000528062 TMEM2Q9UHN6 1383 aa17.88■□□□□ 0.45
RBM39-243ENST00000528062 NBPF8Q3BBV2 869 aa17.87■□□□□ 0.45
RBM39-243ENST00000528062 CCDC7Q96M83 1385 aa17.87■□□□□ 0.45
RBM39-243ENST00000528062 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
RBM39-243ENST00000528062 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
RBM39-243ENST00000528062 MYOM2P54296 1465 aa17.86■□□□□ 0.45
RBM39-243ENST00000528062 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
RBM39-243ENST00000528062 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
RBM39-243ENST00000528062 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
RBM39-243ENST00000528062 NRXN3Q9Y4C0 1643 aa17.85■□□□□ 0.45
RBM39-243ENST00000528062 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
RBM39-243ENST00000528062 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
RBM39-243ENST00000528062 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
RBM39-243ENST00000528062 LTKP29376 864 aa17.83■□□□□ 0.45
RBM39-243ENST00000528062 STRCQ7RTU9 1775 aa17.83■□□□□ 0.44
RBM39-243ENST00000528062 IQGAP1P46940 1657 aa17.83■□□□□ 0.44
RBM39-243ENST00000528062 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
RBM39-243ENST00000528062 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
RBM39-243ENST00000528062 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
RBM39-243ENST00000528062 HSPA2P54652 639 aa17.82■□□□□ 0.44
RBM39-243ENST00000528062 SETD1AO15047 1707 aaKnown RBP17.82■□□□□ 0.44
RBM39-243ENST00000528062 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
RBM39-243ENST00000528062 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
RBM39-243ENST00000528062 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
RBM39-243ENST00000528062 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
RBM39-243ENST00000528062 MSH5O43196 834 aa17.8■□□□□ 0.44
RBM39-243ENST00000528062 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
RBM39-243ENST00000528062 FAM9BQ8IZU0 186 aa17.79■□□□□ 0.44
RBM39-243ENST00000528062 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
RBM39-243ENST00000528062 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
RBM39-243ENST00000528062 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
RBM39-243ENST00000528062 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
RBM39-243ENST00000528062 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
RBM39-243ENST00000528062 KIAA1210Q9ULL0 1709 aa17.76■□□□□ 0.43
RBM39-243ENST00000528062 ASXL1Q8IXJ9 1541 aa17.75■□□□□ 0.43
RBM39-243ENST00000528062 MED14O60244 1454 aa17.75■□□□□ 0.43
RBM39-243ENST00000528062 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
RBM39-243ENST00000528062 ALKQ9UM73 1620 aa17.75■□□□□ 0.43
RBM39-243ENST00000528062 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
RBM39-243ENST00000528062 ADAMTS13Q76LX8 1427 aa17.74■□□□□ 0.43
RBM39-243ENST00000528062 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
RBM39-243ENST00000528062 LAMC1P11047 1609 aa17.73■□□□□ 0.43
RBM39-243ENST00000528062 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.73■□□□□ 0.43
RBM39-243ENST00000528062 ZBED9Q6R2W3 1325 aa17.73■□□□□ 0.43
RBM39-243ENST00000528062 ERICH6BQ5W0A0 696 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 ANKLE2Q86XL3 938 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 STAC3Q96MF2 364 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 PPP4R2Q9NY27 417 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 EID1Q9Y6B2 187 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
RBM39-243ENST00000528062 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
RBM39-243ENST00000528062 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
RBM39-243ENST00000528062 NPHP4O75161 1426 aaPredicted RBP17.7■□□□□ 0.42
RBM39-243ENST00000528062 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
RBM39-243ENST00000528062 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
RBM39-243ENST00000528062 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
RBM39-243ENST00000528062 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
RBM39-243ENST00000528062 METP08581 1390 aa17.67■□□□□ 0.42
RBM39-243ENST00000528062 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
RBM39-243ENST00000528062 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
RBM39-243ENST00000528062 B4GALNT3Q6L9W6 998 aa17.66■□□□□ 0.42
RBM39-243ENST00000528062 GPRASP1Q5JY77 1395 aa17.65■□□□□ 0.42
RBM39-243ENST00000528062 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
RBM39-243ENST00000528062 STRCP1A6NGW2 1772 aa17.64■□□□□ 0.41
RBM39-243ENST00000528062 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
RBM39-243ENST00000528062 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
RBM39-243ENST00000528062 XRN1Q8IZH2 1706 aaKnown RBP17.63■□□□□ 0.41
RBM39-243ENST00000528062 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
RBM39-243ENST00000528062 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
RBM39-243ENST00000528062 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
RBM39-243ENST00000528062 USP47Q96K76 1375 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms