RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ABCF1Q8NE71 845 aaKnown RBP eCLIP49.65■■■■■ 5.54
SSSCA1-205ENST00000527920 TRIM52Q96A61 297 aa49.62■■■■■ 5.53
SSSCA1-205ENST00000527920 TRPM2O94759 1503 aa49.6■■■■■ 5.53
SSSCA1-205ENST00000527920 PPP1R15AO75807 674 aaPredicted RBP49.59■■■■■ 5.53
SSSCA1-205ENST00000527920 SLC26A8Q96RN1 970 aa49.58■■■■■ 5.53
SSSCA1-205ENST00000527920 TOM1O60784 492 aa49.57■■■■■ 5.53
SSSCA1-205ENST00000527920 KCNA6P17658 529 aa49.53■■■■■ 5.52
SSSCA1-205ENST00000527920 SLC4A1APQ9BWU0 796 aaKnown RBP49.52■■■■■ 5.52
SSSCA1-205ENST00000527920 BCANQ96GW7 911 aa49.5■■■■■ 5.51
SSSCA1-205ENST00000527920 CLTCL1P53675 1640 aa49.47■■■■■ 5.51
SSSCA1-205ENST00000527920 NWD1Q149M9 1564 aa49.46■■■■■ 5.51
SSSCA1-205ENST00000527920 ACIN1Q9UKV3 1341 aaKnown RBP49.46■■■■■ 5.51
SSSCA1-205ENST00000527920 TBX22Q9Y458 520 aa49.45■■■■■ 5.51
SSSCA1-205ENST00000527920 NKTRP30414 1462 aaKnown RBP49.44■■■■■ 5.5
SSSCA1-205ENST00000527920 ALKQ9UM73 1620 aa49.42■■■■■ 5.5
SSSCA1-205ENST00000527920 DIP2AQ14689 1571 aa49.41■■■■■ 5.5
SSSCA1-205ENST00000527920 ADAMTS13Q76LX8 1427 aa49.39■■■■■ 5.5
SSSCA1-205ENST00000527920 NUTM2DQ5VT03 806 aaPredicted RBP49.36■■■■■ 5.49
SSSCA1-205ENST00000527920 SETD5Q9C0A6 1442 aa49.34■■■■■ 5.49
SSSCA1-205ENST00000527920 TMEM94Q12767 1356 aa49.33■■■■■ 5.49
SSSCA1-205ENST00000527920 PIK3R4Q99570 1358 aa49.33■■■■■ 5.49
SSSCA1-205ENST00000527920 PIP4K2BP78356 416 aa49.32■■■■■ 5.49
SSSCA1-205ENST00000527920 ZNF326Q5BKZ1 582 aaKnown RBP49.32■■■■■ 5.49
SSSCA1-205ENST00000527920 XIRP1Q702N8 1843 aaKnown RBP49.32■■■■■ 5.49
SSSCA1-205ENST00000527920 SENP3Q9H4L4 574 aaPredicted RBP49.29■■■■■ 5.48
SSSCA1-205ENST00000527920 SCAF1Q9H7N4 1312 aaKnown RBP49.29■■■■■ 5.48
SSSCA1-205ENST00000527920 CHD2O14647 1828 aaKnown RBP49.28■■■■■ 5.48
SSSCA1-205ENST00000527920 KIF1BO60333 1816 aa49.28■■■■■ 5.48
SSSCA1-205ENST00000527920 PROSER2Q86WR7 435 aaPredicted RBP49.28■■■■■ 5.48
SSSCA1-205ENST00000527920 SETBP1Q9Y6X0 1596 aa49.27■■■■■ 5.48
SSSCA1-205ENST00000527920 NEXMIFQ5QGS0 1516 aa49.26■■■■■ 5.48
SSSCA1-205ENST00000527920 MPHOSPH9Q99550 1183 aa49.26■■■■■ 5.48
SSSCA1-205ENST00000527920 NRXN3Q9Y4C0 1643 aa49.19■■■■■ 5.46
SSSCA1-205ENST00000527920 FOXD1Q16676 465 aa49.17■■■■■ 5.46
SSSCA1-205ENST00000527920 RPGRIP1LQ68CZ1 1315 aa49.15■■■■■ 5.46
SSSCA1-205ENST00000527920 NCOA3Q9Y6Q9 1424 aa49.15■■■■■ 5.46
SSSCA1-205ENST00000527920 RAB3GAP2Q9H2M9 1393 aa49.15■■■■■ 5.46
SSSCA1-205ENST00000527920 HSPA1LP34931 641 aa49.14■■■■■ 5.46
SSSCA1-205ENST00000527920 CCDC144AA2RUR9 1427 aa49.13■■■■■ 5.46
SSSCA1-205ENST00000527920 VGFO15240 615 aaPredicted RBP49.08■■■■■ 5.45
SSSCA1-205ENST00000527920 MSH6P52701 1360 aa49.07■■■■■ 5.45
SSSCA1-205ENST00000527920 RBM33Q96EV2 1170 aaKnown RBP49.07■■■■■ 5.45
SSSCA1-205ENST00000527920 PTPRUQ92729 1446 aa49.06■■■■■ 5.44
SSSCA1-205ENST00000527920 AMOTL2Q9Y2J4 779 aa49.03■■■■■ 5.44
SSSCA1-205ENST00000527920 FAM135BQ49AJ0 1406 aa49.02■■■■■ 5.44
SSSCA1-205ENST00000527920 METP08581 1390 aa48.99■■■■■ 5.43
SSSCA1-205ENST00000527920 SPATA31E1Q6ZUB1 1445 aa48.99■■■■■ 5.43
SSSCA1-205ENST00000527920 XRN1Q8IZH2 1706 aaKnown RBP48.98■■■■■ 5.43
SSSCA1-205ENST00000527920 HRCP23327 699 aa48.98■■■■■ 5.43
SSSCA1-205ENST00000527920 PPLO60437 1756 aa48.95■■■■■ 5.43
SSSCA1-205ENST00000527920 DISP3Q9P2K9 1392 aa48.9■■■■■ 5.42
SSSCA1-205ENST00000527920 C19orf44Q9H6X5 657 aa48.87■■■■■ 5.41
SSSCA1-205ENST00000527920 ANKRD30BQ9BXX2 1392 aa48.86■■■■■ 5.41
SSSCA1-205ENST00000527920 C14orf37Q86TY3 774 aa48.85■■■■■ 5.41
SSSCA1-205ENST00000527920 SLAIN2Q9P270 581 aa48.84■■■■■ 5.41
SSSCA1-205ENST00000527920 SETD1AO15047 1707 aaKnown RBP48.83■■■■■ 5.41
SSSCA1-205ENST00000527920 ROBO1Q9Y6N7 1651 aa48.8■■■■■ 5.4
SSSCA1-205ENST00000527920 RGL3Q3MIN7 710 aa48.8■■■■■ 5.4
SSSCA1-205ENST00000527920 CADPS2Q86UW7 1296 aa48.8■■■■■ 5.4
SSSCA1-205ENST00000527920 DCCP43146 1447 aa48.79■■■■■ 5.4
SSSCA1-205ENST00000527920 PRAG1Q86YV5 1406 aa48.79■■■■■ 5.4
SSSCA1-205ENST00000527920 SIPA1L2Q9P2F8 1722 aaPredicted RBP48.77■■■■■ 5.4
SSSCA1-205ENST00000527920 IFT172Q9UG01 1749 aa48.75■■■■■ 5.4
SSSCA1-205ENST00000527920 PTCH1Q13635 1447 aa48.75■■■■■ 5.39
SSSCA1-205ENST00000527920 ATF3P18847 181 aa48.73■■■■■ 5.39
SSSCA1-205ENST00000527920 ADGRF5Q8IZF2 1346 aa48.73■■■■■ 5.39
SSSCA1-205ENST00000527920 MED1Q15648 1581 aaPredicted RBP48.67■■■■■ 5.38
SSSCA1-205ENST00000527920 ADGRL3Q9HAR2 1447 aa48.66■■■■■ 5.38
SSSCA1-205ENST00000527920 PIK3C2GO75747 1445 aa48.65■■■■■ 5.38
SSSCA1-205ENST00000527920 ROBO2Q9HCK4 1378 aa48.61■■■■■ 5.37
SSSCA1-205ENST00000527920 MYOM2P54296 1465 aa48.59■■■■■ 5.37
SSSCA1-205ENST00000527920 NRXN1Q9ULB1 1477 aa48.57■■■■■ 5.37
SSSCA1-205ENST00000527920 NALCNQ8IZF0 1738 aa48.52■■■■■ 5.36
SSSCA1-205ENST00000527920 MST1RQ04912 1400 aa48.52■■■■■ 5.36
SSSCA1-205ENST00000527920 TECPR2O15040 1411 aa48.5■■■■■ 5.36
SSSCA1-205ENST00000527920 LRPPRCP42704 1394 aaKnown RBP48.48■■■■■ 5.35
SSSCA1-205ENST00000527920 PHLPP1O60346 1717 aa48.47■■■■■ 5.35
SSSCA1-205ENST00000527920 ASXL1Q8IXJ9 1541 aa48.47■■■■■ 5.35
SSSCA1-205ENST00000527920 AHDC1Q5TGY3 1603 aaPredicted RBP48.47■■■■■ 5.35
SSSCA1-205ENST00000527920 BRINP3Q76B58 766 aa48.45■■■■■ 5.35
SSSCA1-205ENST00000527920 ABCC11Q96J66 1382 aa48.45■■■■■ 5.35
SSSCA1-205ENST00000527920 C14orf93Q9H972 538 aaKnown RBP48.44■■■■■ 5.34
SSSCA1-205ENST00000527920 ILDR2Q71H61 639 aa48.43■■■■■ 5.34
SSSCA1-205ENST00000527920 LAMC1P11047 1609 aa48.41■■■■■ 5.34
SSSCA1-205ENST00000527920 COL16A1Q07092 1604 aaPredicted RBP48.41■■■■■ 5.34
SSSCA1-205ENST00000527920 JCADQ9P266 1359 aa48.39■■■■■ 5.34
SSSCA1-205ENST00000527920 STAC3Q96MF2 364 aa48.38■■■■■ 5.34
SSSCA1-205ENST00000527920 KNDC1Q76NI1 1749 aa48.37■■■■■ 5.33
SSSCA1-205ENST00000527920 YTHDC2Q9H6S0 1430 aaKnown RBP48.36■■■■■ 5.33
SSSCA1-205ENST00000527920 TMEM132EQ6IEE7 984 aa48.36■■■■■ 5.33
SSSCA1-205ENST00000527920 STK26Q9P289 416 aa48.32■■■■■ 5.33
SSSCA1-205ENST00000527920 C1orf167Q5SNV9 1468 aa48.31■■■■■ 5.32
SSSCA1-205ENST00000527920 CFAP70Q5T0N1 1121 aa48.3■■■■■ 5.32
SSSCA1-205ENST00000527920 PHF23Q9BUL5 403 aaPredicted RBP48.3■■■■■ 5.32
SSSCA1-205ENST00000527920 SIRT1Q96EB6 747 aa48.29■■■■■ 5.32
SSSCA1-205ENST00000527920 CDC42BPGQ6DT37 1551 aa48.29■■■■■ 5.32
SSSCA1-205ENST00000527920 DHX57Q6P158 1386 aaKnown RBP48.27■■■■■ 5.32
SSSCA1-205ENST00000527920 DCAF11Q8TEB1 546 aa48.24■■■■■ 5.31
SSSCA1-205ENST00000527920 NHSL1Q5SYE7 1610 aa48.24■■■■■ 5.31
SSSCA1-205ENST00000527920 WAPLQ7Z5K2 1190 aa48.22■■■■■ 5.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms