RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 BOLA1Q9Y3E2 137 aa6.88□□□□□ -1.31
CHD7-205ENST00000527825 DIP2CQ9Y2E4 1556 aa6.87□□□□□ -1.31
CHD7-205ENST00000527825 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
CHD7-205ENST00000527825 ABCA6Q8N139 1617 aa6.87□□□□□ -1.31
CHD7-205ENST00000527825 REREQ9P2R6 1566 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 CEP170BQ9Y4F5 1589 aaPredicted RBP6.86□□□□□ -1.31
CHD7-205ENST00000527825 AGLP35573 1532 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 ZNF518AQ6AHZ1 1483 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 NPATQ14207 1427 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 G3V3G9 751 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 SNPHO15079 494 aa6.86□□□□□ -1.31
CHD7-205ENST00000527825 RGS17Q9UGC6 210 aaPredicted RBP6.86□□□□□ -1.31
CHD7-205ENST00000527825 RNF17Q9BXT8 1623 aaKnown RBP6.86□□□□□ -1.31
CHD7-205ENST00000527825 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
CHD7-205ENST00000527825 TAOK2Q9UL54 1235 aa6.85□□□□□ -1.31
CHD7-205ENST00000527825 TCOF1Q13428 1488 aaKnown RBP6.85□□□□□ -1.31
CHD7-205ENST00000527825 POTEAQ6S8J7 498 aa6.84□□□□□ -1.31
CHD7-205ENST00000527825 TMEM121BQ9BXQ6 578 aaPredicted RBP6.84□□□□□ -1.31
CHD7-205ENST00000527825 NUP153P49790 1475 aaKnown RBP6.84□□□□□ -1.31
CHD7-205ENST00000527825 KDM5CP41229 1560 aa6.83□□□□□ -1.32
CHD7-205ENST00000527825 SAMD9Q5K651 1589 aa6.83□□□□□ -1.32
CHD7-205ENST00000527825 SOX12O15370 315 aa6.83□□□□□ -1.32
CHD7-205ENST00000527825 EFCAB2Q5VUJ9 269 aa6.83□□□□□ -1.32
CHD7-205ENST00000527825 PLCH2O75038 1416 aa6.83□□□□□ -1.32
CHD7-205ENST00000527825 SYNMO15061 1565 aa6.82□□□□□ -1.32
CHD7-205ENST00000527825 CDAN1Q8IWY9 1227 aa6.82□□□□□ -1.32
CHD7-205ENST00000527825 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
CHD7-205ENST00000527825 ARHGAP5Q13017 1502 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 DNMT1P26358 1616 aaKnown RBP6.81□□□□□ -1.32
CHD7-205ENST00000527825 ALKQ9UM73 1620 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 MARVELD3Q96A59 401 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 BCL11BQ9C0K0 894 aaPredicted RBP6.81□□□□□ -1.32
CHD7-205ENST00000527825 PHF8Q9UPP1 1060 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 ZMYM3Q14202 1370 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 ITSN2Q9NZM3 1697 aa6.81□□□□□ -1.32
CHD7-205ENST00000527825 AFAP1Q8N556 730 aa6.8□□□□□ -1.32
CHD7-205ENST00000527825 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD7-205ENST00000527825 STK24Q9Y6E0 443 aa6.8□□□□□ -1.32
CHD7-205ENST00000527825 VWDEQ8N2E2 1590 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 NEURL4Q96JN8 1562 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 IQGAP1P46940 1657 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 STRCP1A6NGW2 1772 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 KIDINS220Q9ULH0 1771 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 KIF14Q15058 1648 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 A2ML1A8K2U0 1454 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 MLH3Q9UHC1 1453 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 CDC42BPBQ9Y5S2 1711 aa6.79□□□□□ -1.32
CHD7-205ENST00000527825 STK25O00506 426 aa6.78□□□□□ -1.32
CHD7-205ENST00000527825 RANGAP1P46060 587 aaPredicted RBP6.78□□□□□ -1.32
CHD7-205ENST00000527825 HOXB3P14651 431 aaPredicted RBP6.77□□□□□ -1.33
CHD7-205ENST00000527825 TRIM52Q96A61 297 aa6.77□□□□□ -1.33
CHD7-205ENST00000527825 CDK13Q14004 1512 aaKnown RBP6.76□□□□□ -1.33
CHD7-205ENST00000527825 LRRC7Q96NW7 1537 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 PHLPP1O60346 1717 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 EMP3P54852 163 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 NLRP6P59044 892 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 TMEM92Q6UXU6 159 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 ANKLE2Q86XL3 938 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 FBXO22Q8NEZ5 403 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 XIRP1Q702N8 1843 aaKnown RBP6.76□□□□□ -1.33
CHD7-205ENST00000527825 DEPDC5O75140 1603 aa6.76□□□□□ -1.33
CHD7-205ENST00000527825 ROBO1Q9Y6N7 1651 aa6.75□□□□□ -1.33
CHD7-205ENST00000527825 CHGAP10645 457 aaKnown RBP6.75□□□□□ -1.33
CHD7-205ENST00000527825 MEX3CQ5U5Q3 659 aaKnown RBP6.75□□□□□ -1.33
CHD7-205ENST00000527825 MFRPQ9BY79 579 aa6.75□□□□□ -1.33
CHD7-205ENST00000527825 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
CHD7-205ENST00000527825 HS6ST3Q8IZP7 471 aa6.74□□□□□ -1.33
CHD7-205ENST00000527825 ATP1B4Q9UN42 357 aaPredicted RBP6.74□□□□□ -1.33
CHD7-205ENST00000527825 CDK11AQ9UQ88 783 aaPredicted RBP6.74□□□□□ -1.33
CHD7-205ENST00000527825 PREX2Q70Z35 1606 aa6.73□□□□□ -1.33
CHD7-205ENST00000527825 ABCC1P33527 1531 aa6.73□□□□□ -1.33
CHD7-205ENST00000527825 GGT6Q6P531 493 aa6.73□□□□□ -1.33
CHD7-205ENST00000527825 CLIP1P30622 1438 aa6.73□□□□□ -1.33
CHD7-205ENST00000527825 PRXQ9BXM0 1461 aa6.73□□□□□ -1.33
CHD7-205ENST00000527825 DOK7Q18PE1 504 aa6.72□□□□□ -1.33
CHD7-205ENST00000527825 ZNF772Q68DY9 489 aaPredicted RBP6.72□□□□□ -1.33
CHD7-205ENST00000527825 THEMISQ8N1K5 641 aaPredicted RBP6.72□□□□□ -1.33
CHD7-205ENST00000527825 ZNF710Q8N1W2 664 aa6.72□□□□□ -1.33
CHD7-205ENST00000527825 ADGBQ8N7X0 1667 aa6.71□□□□□ -1.33
CHD7-205ENST00000527825 FAM135AQ9P2D6 1515 aa6.71□□□□□ -1.33
CHD7-205ENST00000527825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.71□□□□□ -1.33
CHD7-205ENST00000527825 UGGT1Q9NYU2 1555 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 POTEB3A0JP26 581 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 RXRBP28702 533 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 POTEBQ6S5H4 581 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 HS3ST6Q96QI5 342 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 MED14O60244 1454 aa6.71□□□□□ -1.34
CHD7-205ENST00000527825 TNRQ92752 1358 aa6.7□□□□□ -1.34
CHD7-205ENST00000527825 CDC42BPAQ5VT25 1732 aa6.7□□□□□ -1.34
CHD7-205ENST00000527825 SAMD9LQ8IVG5 1584 aa6.7□□□□□ -1.34
CHD7-205ENST00000527825 FAM135BQ49AJ0 1406 aa6.7□□□□□ -1.34
CHD7-205ENST00000527825 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
CHD7-205ENST00000527825 ZC3H13Q5T200 1668 aaKnown RBP6.69□□□□□ -1.34
CHD7-205ENST00000527825 ATP7AQ04656 1500 aa6.69□□□□□ -1.34
CHD7-205ENST00000527825 JCADQ9P266 1359 aa6.69□□□□□ -1.34
CHD7-205ENST00000527825 A2MP01023 1474 aa6.68□□□□□ -1.34
CHD7-205ENST00000527825 LRRC9Q6ZRR7 1453 aa6.68□□□□□ -1.34
CHD7-205ENST00000527825 NUTM2BA6NNL0 878 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms