RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
SRPRA-202ENST00000527817 NWD1Q149M9 1564 aa19.28■□□□□ 0.68
SRPRA-202ENST00000527817 APLP2Q06481 763 aa19.27■□□□□ 0.68
SRPRA-202ENST00000527817 TBX22Q9Y458 520 aa19.27■□□□□ 0.68
SRPRA-202ENST00000527817 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
SRPRA-202ENST00000527817 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
SRPRA-202ENST00000527817 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
SRPRA-202ENST00000527817 NCOA3Q9Y6Q9 1424 aa19.25■□□□□ 0.67
SRPRA-202ENST00000527817 PHLPP1O60346 1717 aa19.24■□□□□ 0.67
SRPRA-202ENST00000527817 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
SRPRA-202ENST00000527817 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
SRPRA-202ENST00000527817 SPATA31A6Q5VVP1 1343 aa19.23■□□□□ 0.67
SRPRA-202ENST00000527817 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
SRPRA-202ENST00000527817 ZNF772Q68DY9 489 aaPredicted RBP19.22■□□□□ 0.67
SRPRA-202ENST00000527817 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
SRPRA-202ENST00000527817 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
SRPRA-202ENST00000527817 C19orf44Q9H6X5 657 aa19.21■□□□□ 0.67
SRPRA-202ENST00000527817 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
SRPRA-202ENST00000527817 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
SRPRA-202ENST00000527817 UPF1Q92900 1129 aaKnown RBP eCLIP19.19■□□□□ 0.66
SRPRA-202ENST00000527817 ADGRL2O95490 1459 aa19.18■□□□□ 0.66
SRPRA-202ENST00000527817 COL16A1Q07092 1604 aaPredicted RBP19.18■□□□□ 0.66
SRPRA-202ENST00000527817 ATF3P18847 181 aa19.17■□□□□ 0.66
SRPRA-202ENST00000527817 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
SRPRA-202ENST00000527817 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
SRPRA-202ENST00000527817 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
SRPRA-202ENST00000527817 SETD1AO15047 1707 aaKnown RBP19.15■□□□□ 0.66
SRPRA-202ENST00000527817 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
SRPRA-202ENST00000527817 LRP6O75581 1613 aa19.14■□□□□ 0.66
SRPRA-202ENST00000527817 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
SRPRA-202ENST00000527817 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
SRPRA-202ENST00000527817 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
SRPRA-202ENST00000527817 RXRBP28702 533 aa19.13■□□□□ 0.65
SRPRA-202ENST00000527817 TRIM52Q96A61 297 aa19.13■□□□□ 0.65
SRPRA-202ENST00000527817 ADAMTS13Q76LX8 1427 aa19.13■□□□□ 0.65
SRPRA-202ENST00000527817 AHDC1Q5TGY3 1603 aaPredicted RBP19.11■□□□□ 0.65
SRPRA-202ENST00000527817 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
SRPRA-202ENST00000527817 AMOTL2Q9Y2J4 779 aa19.11■□□□□ 0.65
SRPRA-202ENST00000527817 NUTM2DQ5VT03 806 aaPredicted RBP19.1■□□□□ 0.65
SRPRA-202ENST00000527817 BRINP3Q76B58 766 aa19.1■□□□□ 0.65
SRPRA-202ENST00000527817 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.1■□□□□ 0.65
SRPRA-202ENST00000527817 GCC2Q8IWJ2 1684 aa19.1■□□□□ 0.65
SRPRA-202ENST00000527817 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
SRPRA-202ENST00000527817 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
SRPRA-202ENST00000527817 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
SRPRA-202ENST00000527817 NUTM2BA6NNL0 878 aaPredicted RBP19.05■□□□□ 0.64
SRPRA-202ENST00000527817 NUTM2EB1AL46 878 aaPredicted RBP19.05■□□□□ 0.64
SRPRA-202ENST00000527817 NUTM2AQ8IVF1 878 aaPredicted RBP19.05■□□□□ 0.64
SRPRA-202ENST00000527817 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
SRPRA-202ENST00000527817 DCCP43146 1447 aa19.03■□□□□ 0.64
SRPRA-202ENST00000527817 LRRC59Q96AG4 307 aaKnown RBP19.03■□□□□ 0.64
SRPRA-202ENST00000527817 AFF2P51816 1311 aa19.02■□□□□ 0.64
SRPRA-202ENST00000527817 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
SRPRA-202ENST00000527817 TRPM2O94759 1503 aa19.02■□□□□ 0.64
SRPRA-202ENST00000527817 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
SRPRA-202ENST00000527817 UNC13BO14795 1591 aa19■□□□□ 0.63
SRPRA-202ENST00000527817 E9PCH4 1651 aa19■□□□□ 0.63
SRPRA-202ENST00000527817 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
SRPRA-202ENST00000527817 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
SRPRA-202ENST00000527817 MST1RQ04912 1400 aa18.97■□□□□ 0.63
SRPRA-202ENST00000527817 NUP155O75694 1391 aa18.96■□□□□ 0.63
SRPRA-202ENST00000527817 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
SRPRA-202ENST00000527817 IQGAP3Q86VI3 1631 aa18.94■□□□□ 0.62
SRPRA-202ENST00000527817 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
SRPRA-202ENST00000527817 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
SRPRA-202ENST00000527817 METP08581 1390 aa18.93■□□□□ 0.62
SRPRA-202ENST00000527817 NHSL1Q5SYE7 1610 aa18.92■□□□□ 0.62
SRPRA-202ENST00000527817 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
SRPRA-202ENST00000527817 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
SRPRA-202ENST00000527817 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
SRPRA-202ENST00000527817 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
SRPRA-202ENST00000527817 DDX17Q92841 729 aaKnown RBP18.91■□□□□ 0.62
SRPRA-202ENST00000527817 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
SRPRA-202ENST00000527817 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
SRPRA-202ENST00000527817 RGS12O14924 1447 aa18.9■□□□□ 0.62
SRPRA-202ENST00000527817 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
SRPRA-202ENST00000527817 ADAMTS2O95450 1211 aa18.86■□□□□ 0.61
SRPRA-202ENST00000527817 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
SRPRA-202ENST00000527817 C1orf167Q5SNV9 1468 aa18.84■□□□□ 0.61
SRPRA-202ENST00000527817 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.6
SRPRA-202ENST00000527817 USP21Q9UK80 565 aa18.83■□□□□ 0.6
SRPRA-202ENST00000527817 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
SRPRA-202ENST00000527817 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
SRPRA-202ENST00000527817 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
SRPRA-202ENST00000527817 ITGAEP38570 1179 aa18.81■□□□□ 0.6
SRPRA-202ENST00000527817 FOXD1Q16676 465 aa18.81■□□□□ 0.6
SRPRA-202ENST00000527817 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SRPRA-202ENST00000527817 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
SRPRA-202ENST00000527817 LAMC1P11047 1609 aa18.79■□□□□ 0.6
SRPRA-202ENST00000527817 PTCH1Q13635 1447 aa18.79■□□□□ 0.6
SRPRA-202ENST00000527817 NALCNQ8IZF0 1738 aa18.78■□□□□ 0.6
SRPRA-202ENST00000527817 CCDC125Q86Z20 511 aa18.77■□□□□ 0.6
SRPRA-202ENST00000527817 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
SRPRA-202ENST00000527817 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.6
SRPRA-202ENST00000527817 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
SRPRA-202ENST00000527817 ATRNO75882 1429 aa18.75■□□□□ 0.59
SRPRA-202ENST00000527817 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
SRPRA-202ENST00000527817 PRAG1Q86YV5 1406 aa18.73■□□□□ 0.59
SRPRA-202ENST00000527817 EP400Q96L91 3159 aa18.72■□□□□ 0.59
SRPRA-202ENST00000527817 CLTCL1P53675 1640 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms