RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
CTNND1-217ENST00000527599 SLF2Q8IX21 1173 aa18.54■□□□□ 0.56
CTNND1-217ENST00000527599 ZC3H15Q8WU90 426 aaKnown RBP18.54■□□□□ 0.56
CTNND1-217ENST00000527599 IRF6O14896 467 aa18.53■□□□□ 0.56
CTNND1-217ENST00000527599 APLP1P51693 650 aa18.5■□□□□ 0.55
CTNND1-217ENST00000527599 ZMYND10O75800 440 aa18.49■□□□□ 0.55
CTNND1-217ENST00000527599 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
CTNND1-217ENST00000527599 SLC10A3P09131 477 aa18.46■□□□□ 0.55
CTNND1-217ENST00000527599 ITGBL1O95965 494 aaPredicted RBP18.45■□□□□ 0.54
CTNND1-217ENST00000527599 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
CTNND1-217ENST00000527599 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
CTNND1-217ENST00000527599 BCANQ96GW7 911 aa18.42■□□□□ 0.54
CTNND1-217ENST00000527599 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
CTNND1-217ENST00000527599 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
CTNND1-217ENST00000527599 TJAP1Q5JTD0 557 aa18.39■□□□□ 0.53
CTNND1-217ENST00000527599 IFFO2Q5TF58 517 aa18.39■□□□□ 0.53
CTNND1-217ENST00000527599 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
CTNND1-217ENST00000527599 MTRQ99707 1265 aa18.35■□□□□ 0.53
CTNND1-217ENST00000527599 CFHP08603 1231 aa18.34■□□□□ 0.53
CTNND1-217ENST00000527599 KRI1Q8N9T8 703 aaKnown RBP18.34■□□□□ 0.53
CTNND1-217ENST00000527599 KCNC4Q03721 635 aa18.32■□□□□ 0.52
CTNND1-217ENST00000527599 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
CTNND1-217ENST00000527599 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
CTNND1-217ENST00000527599 ZNF516Q92618 1163 aa18.3■□□□□ 0.52
CTNND1-217ENST00000527599 ACTN4O43707 911 aaKnown RBP18.28■□□□□ 0.52
CTNND1-217ENST00000527599 COPS2P61201 443 aa18.27■□□□□ 0.52
CTNND1-217ENST00000527599 RDH13Q8NBN7 331 aa18.26■□□□□ 0.51
CTNND1-217ENST00000527599 TMUB1Q9BVT8 246 aa18.26■□□□□ 0.51
CTNND1-217ENST00000527599 PRR14Q9BWN1 585 aa18.26■□□□□ 0.51
CTNND1-217ENST00000527599 IL21Q9HBE4 155 aa18.26■□□□□ 0.51
CTNND1-217ENST00000527599 KMT5BQ4FZB7 885 aa18.25■□□□□ 0.51
CTNND1-217ENST00000527599 PCDHB3Q9Y5E6 796 aa18.25■□□□□ 0.51
CTNND1-217ENST00000527599 BLOC1S3Q6QNY0 202 aa18.24■□□□□ 0.51
CTNND1-217ENST00000527599 REPIN1Q9BWE0 567 aaKnown RBP18.24■□□□□ 0.51
CTNND1-217ENST00000527599 A0A0G2JS52 829 aa18.23■□□□□ 0.51
CTNND1-217ENST00000527599 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
CTNND1-217ENST00000527599 SULF1Q8IWU6 871 aa18.22■□□□□ 0.51
CTNND1-217ENST00000527599 GCGRP47871 477 aa18.2■□□□□ 0.5
CTNND1-217ENST00000527599 CD46P15529 392 aa18.19■□□□□ 0.5
CTNND1-217ENST00000527599 NKX2-3Q8TAU0 364 aa18.19■□□□□ 0.5
CTNND1-217ENST00000527599 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
CTNND1-217ENST00000527599 CLCN1P35523 988 aa18.17■□□□□ 0.5
CTNND1-217ENST00000527599 AMHR2Q16671 573 aa18.16■□□□□ 0.5
CTNND1-217ENST00000527599 PUS10Q3MIT2 529 aaKnown RBP18.16■□□□□ 0.5
CTNND1-217ENST00000527599 FAM217BQ9NTX9 383 aaPredicted RBP18.16■□□□□ 0.5
CTNND1-217ENST00000527599 TRIM66O15016 1216 aa18.15■□□□□ 0.5
CTNND1-217ENST00000527599 ZPR1O75312 459 aa18.15■□□□□ 0.5
CTNND1-217ENST00000527599 SLC24A3Q9HC58 644 aa18.15■□□□□ 0.5
CTNND1-217ENST00000527599 FUT2Q10981 343 aa18.14■□□□□ 0.49
CTNND1-217ENST00000527599 AK7Q96M32 723 aa18.14■□□□□ 0.49
CTNND1-217ENST00000527599 TLL1O43897 1013 aa18.09■□□□□ 0.49
CTNND1-217ENST00000527599 TTLL12Q14166 644 aaPredicted RBP18.07■□□□□ 0.48
CTNND1-217ENST00000527599 MORN1Q5T089 497 aa18.07■□□□□ 0.48
CTNND1-217ENST00000527599 SCUBE3Q8IX30 993 aa18.07■□□□□ 0.48
CTNND1-217ENST00000527599 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
CTNND1-217ENST00000527599 PARP9Q8IXQ6 854 aa18.05■□□□□ 0.48
CTNND1-217ENST00000527599 NR1I2O75469 434 aa18.04■□□□□ 0.48
CTNND1-217ENST00000527599 SSTR3P32745 418 aaPredicted RBP18.04■□□□□ 0.48
CTNND1-217ENST00000527599 PPP1R18Q6NYC8 613 aa18.04■□□□□ 0.48
CTNND1-217ENST00000527599 GIGYF2Q6Y7W6 1299 aaKnown RBP18.04■□□□□ 0.48
CTNND1-217ENST00000527599 KDM4AO75164 1064 aa18.01■□□□□ 0.47
CTNND1-217ENST00000527599 SLC27A5Q9Y2P5 690 aa18.01■□□□□ 0.47
CTNND1-217ENST00000527599 PDE4DQ08499 809 aa17.99■□□□□ 0.47
CTNND1-217ENST00000527599 HLA-CQ95604 372 aa17.98■□□□□ 0.47
CTNND1-217ENST00000527599 THAP11Q96EK4 314 aa17.97■□□□□ 0.47
CTNND1-217ENST00000527599 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.96■□□□□ 0.47
CTNND1-217ENST00000527599 ADH1BP00325 375 aa17.95■□□□□ 0.46
CTNND1-217ENST00000527599 MS4A1P11836 297 aa17.95■□□□□ 0.46
CTNND1-217ENST00000527599 RGS20O76081 388 aa17.94■□□□□ 0.46
CTNND1-217ENST00000527599 HOXA2O43364 376 aa17.92■□□□□ 0.46
CTNND1-217ENST00000527599 SPSB2Q99619 263 aa17.91■□□□□ 0.46
CTNND1-217ENST00000527599 S1PR4O95977 384 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 USP46P62068 366 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 GUCA2AQ02747 115 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 BRICD5Q6PL45 260 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 RNF19BQ6ZMZ0 732 aa17.9■□□□□ 0.46
CTNND1-217ENST00000527599 RNF223E7ERA6 249 aa17.88■□□□□ 0.45
CTNND1-217ENST00000527599 SPIRE2Q8WWL2 714 aa17.88■□□□□ 0.45
CTNND1-217ENST00000527599 BEGAINQ9BUH8 593 aa17.88■□□□□ 0.45
CTNND1-217ENST00000527599 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
CTNND1-217ENST00000527599 FAM160A2Q8N612 972 aaPredicted RBP17.87■□□□□ 0.45
CTNND1-217ENST00000527599 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
CTNND1-217ENST00000527599 PPEF1O14829 653 aaPredicted RBP17.86■□□□□ 0.45
CTNND1-217ENST00000527599 FMNL1O95466 1100 aaPredicted RBP17.86■□□□□ 0.45
CTNND1-217ENST00000527599 SLC6A16Q9GZN6 736 aa17.85■□□□□ 0.45
CTNND1-217ENST00000527599 GGCXP38435 758 aa17.84■□□□□ 0.45
CTNND1-217ENST00000527599 EMID1Q96A84 441 aaPredicted RBP17.81■□□□□ 0.44
CTNND1-217ENST00000527599 NDUFV2P19404 249 aa17.8■□□□□ 0.44
CTNND1-217ENST00000527599 PRDM9Q9NQV7 894 aa17.8■□□□□ 0.44
CTNND1-217ENST00000527599 PCDHGC3Q9UN70 934 aa17.8■□□□□ 0.44
CTNND1-217ENST00000527599 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
CTNND1-217ENST00000527599 PRKD2Q9BZL6 878 aa17.79■□□□□ 0.44
CTNND1-217ENST00000527599 Q3C1V9 767 aa17.78■□□□□ 0.44
CTNND1-217ENST00000527599 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
CTNND1-217ENST00000527599 SYMPKQ92797 1274 aaKnown RBP17.77■□□□□ 0.44
CTNND1-217ENST00000527599 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
CTNND1-217ENST00000527599 GPBP1L1Q9HC44 474 aaPredicted RBP17.76■□□□□ 0.43
CTNND1-217ENST00000527599 FDX1P10109 184 aa17.75■□□□□ 0.43
CTNND1-217ENST00000527599 MSS51Q4VC12 460 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms