RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CREBRFQ8IUR6 639 aa8.96□□□□□ -0.97
CTNND1-216ENST00000527467 KIF3AQ9Y496 699 aa8.96□□□□□ -0.97
CTNND1-216ENST00000527467 ARAP1Q96P48 1450 aa8.96□□□□□ -0.98
CTNND1-216ENST00000527467 WASHC2AQ641Q2 1341 aa8.96□□□□□ -0.98
CTNND1-216ENST00000527467 RASSF8Q8NHQ8 419 aa8.96□□□□□ -0.98
CTNND1-216ENST00000527467 MSH6P52701 1360 aa8.96□□□□□ -0.98
CTNND1-216ENST00000527467 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-216ENST00000527467 ABCC10Q5T3U5 1492 aa8.95□□□□□ -0.98
CTNND1-216ENST00000527467 DYDC1Q8WWB3 177 aa8.95□□□□□ -0.98
CTNND1-216ENST00000527467 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
CTNND1-216ENST00000527467 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
CTNND1-216ENST00000527467 NUDCQ9Y266 331 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 EFCAB5A4FU69 1503 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 IPO7O95373 1038 aaKnown RBP8.94□□□□□ -0.98
CTNND1-216ENST00000527467 NGDNQ8NEJ9 315 aaKnown RBP8.94□□□□□ -0.98
CTNND1-216ENST00000527467 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 CEP170Q5SW79 1584 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
CTNND1-216ENST00000527467 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 LRPPRCP42704 1394 aaKnown RBP8.93□□□□□ -0.98
CTNND1-216ENST00000527467 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
CTNND1-216ENST00000527467 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 SLC52A1Q9NWF4 448 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 ZNF772Q68DY9 489 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-216ENST00000527467 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 KNSTRNQ9Y448 316 aa8.93□□□□□ -0.98
CTNND1-216ENST00000527467 PES1O00541 588 aaKnown RBP8.92□□□□□ -0.98
CTNND1-216ENST00000527467 TPM2P07951 284 aa8.92□□□□□ -0.98
CTNND1-216ENST00000527467 TPD52L1Q16890 204 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-216ENST00000527467 ZRSR2Q15696 482 aaKnown RBP8.92□□□□□ -0.98
CTNND1-216ENST00000527467 NEO1Q92859 1461 aa8.92□□□□□ -0.98
CTNND1-216ENST00000527467 ARHGAP35Q9NRY4 1499 aa8.92□□□□□ -0.98
CTNND1-216ENST00000527467 IPO9Q96P70 1041 aaKnown RBP8.92□□□□□ -0.98
CTNND1-216ENST00000527467 HSPA2P54652 639 aa8.92□□□□□ -0.98
CTNND1-216ENST00000527467 INCENPQ9NQS7 918 aa8.92□□□□□ -0.98
CTNND1-216ENST00000527467 BECN2A8MW95 431 aa8.91□□□□□ -0.98
CTNND1-216ENST00000527467 NBPF8Q3BBV2 869 aa8.91□□□□□ -0.98
CTNND1-216ENST00000527467 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
CTNND1-216ENST00000527467 TAF3Q5VWG9 929 aa8.91□□□□□ -0.98
CTNND1-216ENST00000527467 TSPYL1Q9H0U9 437 aa8.91□□□□□ -0.98
CTNND1-216ENST00000527467 USP8P40818 1118 aa8.9□□□□□ -0.98
CTNND1-216ENST00000527467 SKOR2Q2VWA4 1001 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-216ENST00000527467 EIF3AQ14152 1382 aaKnown RBP8.9□□□□□ -0.98
CTNND1-216ENST00000527467 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
CTNND1-216ENST00000527467 C9orf84Q5VXU9 1444 aa8.9□□□□□ -0.99
CTNND1-216ENST00000527467 GPRASP1Q5JY77 1395 aa8.9□□□□□ -0.99
CTNND1-216ENST00000527467 GSE1Q14687 1217 aa8.9□□□□□ -0.99
CTNND1-216ENST00000527467 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.99
CTNND1-216ENST00000527467 HOMER1Q86YM7 354 aa8.9□□□□□ -0.99
CTNND1-216ENST00000527467 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.99
CTNND1-216ENST00000527467 TNRQ92752 1358 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 MNS1Q8NEH6 495 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-216ENST00000527467 TROQ12816 1431 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-216ENST00000527467 MSH5O43196 834 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 FAM43AQ8N2R8 423 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
CTNND1-216ENST00000527467 GOLGA6L7A0A1B0GV03 622 aa8.88□□□□□ -0.99
CTNND1-216ENST00000527467 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
CTNND1-216ENST00000527467 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
CTNND1-216ENST00000527467 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
CTNND1-216ENST00000527467 HIRIP3Q9BW71 556 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-216ENST00000527467 KIF16BQ96L93 1317 aa8.88□□□□□ -0.99
CTNND1-216ENST00000527467 DEF6Q9H4E7 631 aa8.88□□□□□ -0.99
CTNND1-216ENST00000527467 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 ZNF518AQ6AHZ1 1483 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 DIAPH3Q9NSV4 1193 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 PDE3BQ13370 1112 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 CHD1O14646 1710 aa8.87□□□□□ -0.99
CTNND1-216ENST00000527467 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-216ENST00000527467 EPRSP07814 1512 aaKnown RBP8.86□□□□□ -0.99
CTNND1-216ENST00000527467 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 ANO8Q9HCE9 1232 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-216ENST00000527467 DDX49Q9Y6V7 483 aaKnown RBP8.86□□□□□ -0.99
CTNND1-216ENST00000527467 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-216ENST00000527467 UHRF1BP1LA0JNW5 1464 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 ATP10AO60312 1499 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 PTPRKQ15262 1439 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 RWDD1Q9H446 243 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-216ENST00000527467 ATP6V1DQ9Y5K8 247 aa8.86□□□□□ -0.99
CTNND1-216ENST00000527467 MARCH6O60337 910 aa8.85□□□□□ -0.99
CTNND1-216ENST00000527467 STK26Q9P289 416 aa8.85□□□□□ -0.99
CTNND1-216ENST00000527467 KIAA0754O94854 1291 aa8.85□□□□□ -0.99
CTNND1-216ENST00000527467 MYOM3Q5VTT5 1437 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 MAGI2Q86UL8 1455 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 KIF14Q15058 1648 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 ST18O60284 1047 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 CCDC173Q0VFZ6 552 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 IPO8O15397 1037 aaKnown RBP8.84□□□□□ -0.99
CTNND1-216ENST00000527467 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
CTNND1-216ENST00000527467 PBRM1Q86U86 1689 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 NUP155O75694 1391 aa8.84□□□□□ -0.99
CTNND1-216ENST00000527467 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-216ENST00000527467 CHMP4CQ96CF2 233 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms