RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 MYO5BQ9ULV0 1848 aa13.39□□□□□ -0.27
CCDC90B-208ENST00000527025 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
CCDC90B-208ENST00000527025 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-208ENST00000527025 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
CCDC90B-208ENST00000527025 SLIT1O75093 1534 aa13.38□□□□□ -0.27
CCDC90B-208ENST00000527025 MED14O60244 1454 aa13.37□□□□□ -0.27
CCDC90B-208ENST00000527025 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
CCDC90B-208ENST00000527025 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
CCDC90B-208ENST00000527025 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
CCDC90B-208ENST00000527025 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
CCDC90B-208ENST00000527025 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
CCDC90B-208ENST00000527025 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
CCDC90B-208ENST00000527025 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-208ENST00000527025 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
CCDC90B-208ENST00000527025 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
CCDC90B-208ENST00000527025 POLA2Q14181 598 aa13.34□□□□□ -0.27
CCDC90B-208ENST00000527025 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
CCDC90B-208ENST00000527025 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.27
CCDC90B-208ENST00000527025 STRCP1A6NGW2 1772 aa13.33□□□□□ -0.28
CCDC90B-208ENST00000527025 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-208ENST00000527025 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CCDC90B-208ENST00000527025 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
CCDC90B-208ENST00000527025 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
CCDC90B-208ENST00000527025 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-208ENST00000527025 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
CCDC90B-208ENST00000527025 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-208ENST00000527025 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
CCDC90B-208ENST00000527025 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-208ENST00000527025 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
CCDC90B-208ENST00000527025 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
CCDC90B-208ENST00000527025 TRPM2O94759 1503 aa13.28□□□□□ -0.28
CCDC90B-208ENST00000527025 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
CCDC90B-208ENST00000527025 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-208ENST00000527025 EID1Q9Y6B2 187 aa13.27□□□□□ -0.29
CCDC90B-208ENST00000527025 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.29
CCDC90B-208ENST00000527025 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
CCDC90B-208ENST00000527025 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-208ENST00000527025 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
CCDC90B-208ENST00000527025 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
CCDC90B-208ENST00000527025 KIF1BO60333 1816 aa13.22□□□□□ -0.29
CCDC90B-208ENST00000527025 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
CCDC90B-208ENST00000527025 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
CCDC90B-208ENST00000527025 CPS1P31327 1500 aa13.21□□□□□ -0.29
CCDC90B-208ENST00000527025 NEXMIFQ5QGS0 1516 aa13.21□□□□□ -0.29
CCDC90B-208ENST00000527025 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.3
CCDC90B-208ENST00000527025 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
CCDC90B-208ENST00000527025 RBM33Q96EV2 1170 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-208ENST00000527025 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 KCNA6P17658 529 aa13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 BCANQ96GW7 911 aa13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
CCDC90B-208ENST00000527025 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
CCDC90B-208ENST00000527025 HRCP23327 699 aa13.17□□□□□ -0.3
CCDC90B-208ENST00000527025 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-208ENST00000527025 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
CCDC90B-208ENST00000527025 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
CCDC90B-208ENST00000527025 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
CCDC90B-208ENST00000527025 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
CCDC90B-208ENST00000527025 PPLO60437 1756 aa13.15□□□□□ -0.3
CCDC90B-208ENST00000527025 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
CCDC90B-208ENST00000527025 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
CCDC90B-208ENST00000527025 METP08581 1390 aa13.14□□□□□ -0.31
CCDC90B-208ENST00000527025 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
CCDC90B-208ENST00000527025 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
CCDC90B-208ENST00000527025 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
CCDC90B-208ENST00000527025 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
CCDC90B-208ENST00000527025 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-208ENST00000527025 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
CCDC90B-208ENST00000527025 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
CCDC90B-208ENST00000527025 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-208ENST00000527025 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-208ENST00000527025 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
CCDC90B-208ENST00000527025 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
CCDC90B-208ENST00000527025 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
CCDC90B-208ENST00000527025 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
CCDC90B-208ENST00000527025 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-208ENST00000527025 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-208ENST00000527025 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
CCDC90B-208ENST00000527025 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-208ENST00000527025 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-208ENST00000527025 TOM1O60784 492 aa13.07□□□□□ -0.32
CCDC90B-208ENST00000527025 ZBTB22O15209 634 aa13.05□□□□□ -0.32
CCDC90B-208ENST00000527025 HSPA1LP34931 641 aa13.05□□□□□ -0.32
CCDC90B-208ENST00000527025 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
CCDC90B-208ENST00000527025 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-208ENST00000527025 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
CCDC90B-208ENST00000527025 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-208ENST00000527025 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
CCDC90B-208ENST00000527025 TMEM132EQ6IEE7 984 aa13.02□□□□□ -0.33
CCDC90B-208ENST00000527025 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
CCDC90B-208ENST00000527025 MYOM2P54296 1465 aa13□□□□□ -0.33
CCDC90B-208ENST00000527025 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
CCDC90B-208ENST00000527025 CFAP70Q5T0N1 1121 aa13□□□□□ -0.33
CCDC90B-208ENST00000527025 C14orf93Q9H972 538 aaKnown RBP13□□□□□ -0.33
CCDC90B-208ENST00000527025 SLAIN2Q9P270 581 aa13□□□□□ -0.33
CCDC90B-208ENST00000527025 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 MSH6P52701 1360 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms