RNA–Protein interactions for RNA: ENST00000526927.5

LTBP3-207, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-207ENST00000526927 LMTK2Q8IWU2 1503 aa23.82■■□□□ 1.4
LTBP3-207ENST00000526927 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
LTBP3-207ENST00000526927 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
LTBP3-207ENST00000526927 ARID4BQ4LE39 1312 aaPredicted RBP23.8■■□□□ 1.4
LTBP3-207ENST00000526927 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
LTBP3-207ENST00000526927 BCL11AQ9H165 835 aa23.79■■□□□ 1.4
LTBP3-207ENST00000526927 PANK3Q9H999 370 aa23.79■■□□□ 1.4
LTBP3-207ENST00000526927 TMF1P82094 1093 aa23.78■■□□□ 1.4
LTBP3-207ENST00000526927 IDI1Q13907 227 aa23.78■■□□□ 1.4
LTBP3-207ENST00000526927 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
LTBP3-207ENST00000526927 TRAK1Q9UPV9 953 aa23.75■■□□□ 1.39
LTBP3-207ENST00000526927 LAMC1P11047 1609 aa23.74■■□□□ 1.39
LTBP3-207ENST00000526927 SYNMO15061 1565 aa23.74■■□□□ 1.39
LTBP3-207ENST00000526927 ADGRB3O60242 1522 aa23.72■■□□□ 1.39
LTBP3-207ENST00000526927 IQGAP1P46940 1657 aa23.72■■□□□ 1.39
LTBP3-207ENST00000526927 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
LTBP3-207ENST00000526927 PER1O15534 1290 aaPredicted RBP23.71■■□□□ 1.39
LTBP3-207ENST00000526927 IFT172Q9UG01 1749 aa23.7■■□□□ 1.38
LTBP3-207ENST00000526927 TMC1Q8TDI8 760 aa23.69■■□□□ 1.38
LTBP3-207ENST00000526927 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
LTBP3-207ENST00000526927 FKBP8Q14318 412 aa23.67■■□□□ 1.38
LTBP3-207ENST00000526927 ZMYM4Q5VZL5 1548 aa23.67■■□□□ 1.38
LTBP3-207ENST00000526927 MYOM2P54296 1465 aa23.66■■□□□ 1.38
LTBP3-207ENST00000526927 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
LTBP3-207ENST00000526927 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
LTBP3-207ENST00000526927 PPLO60437 1756 aa23.64■■□□□ 1.37
LTBP3-207ENST00000526927 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.37
LTBP3-207ENST00000526927 STK26Q9P289 416 aa23.63■■□□□ 1.37
LTBP3-207ENST00000526927 STAC3Q96MF2 364 aa23.63■■□□□ 1.37
LTBP3-207ENST00000526927 SALL2Q9Y467 1007 aaPredicted RBP23.62■■□□□ 1.37
LTBP3-207ENST00000526927 KTN1Q86UP2 1357 aaKnown RBP23.61■■□□□ 1.37
LTBP3-207ENST00000526927 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
LTBP3-207ENST00000526927 PNISRQ8TF01 805 aaKnown RBP23.6■■□□□ 1.37
LTBP3-207ENST00000526927 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
LTBP3-207ENST00000526927 PIK3C2GO75747 1445 aa23.6■■□□□ 1.37
LTBP3-207ENST00000526927 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
LTBP3-207ENST00000526927 PREX1Q8TCU6 1659 aa23.59■■□□□ 1.37
LTBP3-207ENST00000526927 CLTCQ00610 1675 aaKnown RBP23.59■■□□□ 1.37
LTBP3-207ENST00000526927 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
LTBP3-207ENST00000526927 PIK3C2BO00750 1634 aa23.58■■□□□ 1.37
LTBP3-207ENST00000526927 EIF3AQ14152 1382 aaKnown RBP23.58■■□□□ 1.36
LTBP3-207ENST00000526927 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
LTBP3-207ENST00000526927 ARHGAP31Q2M1Z3 1444 aa23.57■■□□□ 1.36
LTBP3-207ENST00000526927 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
LTBP3-207ENST00000526927 RALBP1Q15311 655 aa23.57■■□□□ 1.36
LTBP3-207ENST00000526927 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
LTBP3-207ENST00000526927 NEXMIFQ5QGS0 1516 aa23.56■■□□□ 1.36
LTBP3-207ENST00000526927 CENPJQ9HC77 1338 aaPredicted RBP23.55■■□□□ 1.36
LTBP3-207ENST00000526927 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
LTBP3-207ENST00000526927 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
LTBP3-207ENST00000526927 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
LTBP3-207ENST00000526927 ERVK-7P63135 1459 aa23.54■■□□□ 1.36
LTBP3-207ENST00000526927 VGFO15240 615 aaPredicted RBP23.54■■□□□ 1.36
LTBP3-207ENST00000526927 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
LTBP3-207ENST00000526927 RPGRIP1LQ68CZ1 1315 aa23.52■■□□□ 1.36
LTBP3-207ENST00000526927 ADGRB1O14514 1584 aa23.51■■□□□ 1.35
LTBP3-207ENST00000526927 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
LTBP3-207ENST00000526927 NLRP13Q86W25 1043 aa23.5■■□□□ 1.35
LTBP3-207ENST00000526927 MYOM1P52179 1685 aa23.5■■□□□ 1.35
LTBP3-207ENST00000526927 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
LTBP3-207ENST00000526927 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
LTBP3-207ENST00000526927 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
LTBP3-207ENST00000526927 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
LTBP3-207ENST00000526927 ARHGEF40Q8TER5 1519 aa23.48■■□□□ 1.35
LTBP3-207ENST00000526927 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
LTBP3-207ENST00000526927 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
LTBP3-207ENST00000526927 BRD4O60885 1362 aaPredicted RBP23.47■■□□□ 1.35
LTBP3-207ENST00000526927 CEBPAP49715 358 aaPredicted RBP23.47■■□□□ 1.35
LTBP3-207ENST00000526927 NEFLP07196 543 aa23.46■■□□□ 1.35
LTBP3-207ENST00000526927 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
LTBP3-207ENST00000526927 CABP2Q9NPB3 220 aa23.45■■□□□ 1.34
LTBP3-207ENST00000526927 AGLP35573 1532 aa23.44■■□□□ 1.34
LTBP3-207ENST00000526927 TNNT2P45379 298 aaPredicted RBP23.44■■□□□ 1.34
LTBP3-207ENST00000526927 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
LTBP3-207ENST00000526927 ZMYM3Q14202 1370 aa23.43■■□□□ 1.34
LTBP3-207ENST00000526927 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
LTBP3-207ENST00000526927 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
LTBP3-207ENST00000526927 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
LTBP3-207ENST00000526927 RBM19Q9Y4C8 960 aaKnown RBP23.41■■□□□ 1.34
LTBP3-207ENST00000526927 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
LTBP3-207ENST00000526927 REREQ9P2R6 1566 aa23.4■■□□□ 1.34
LTBP3-207ENST00000526927 PRAM1Q96QH2 718 aa23.39■■□□□ 1.34
LTBP3-207ENST00000526927 LRPPRCP42704 1394 aaKnown RBP23.39■■□□□ 1.33
LTBP3-207ENST00000526927 MYO3AQ8NEV4 1616 aa23.36■■□□□ 1.33
LTBP3-207ENST00000526927 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
LTBP3-207ENST00000526927 A2ML1A8K2U0 1454 aa23.36■■□□□ 1.33
LTBP3-207ENST00000526927 WAPLQ7Z5K2 1190 aa23.35■■□□□ 1.33
LTBP3-207ENST00000526927 POGKQ9P215 609 aa23.35■■□□□ 1.33
LTBP3-207ENST00000526927 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
LTBP3-207ENST00000526927 SRPK2P78362 688 aaKnown RBP23.34■■□□□ 1.33
LTBP3-207ENST00000526927 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
LTBP3-207ENST00000526927 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
LTBP3-207ENST00000526927 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
LTBP3-207ENST00000526927 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
LTBP3-207ENST00000526927 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
LTBP3-207ENST00000526927 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
LTBP3-207ENST00000526927 CDCA7LQ96GN5 454 aa23.3■■□□□ 1.32
LTBP3-207ENST00000526927 YTHDC2Q9H6S0 1430 aaKnown RBP23.3■■□□□ 1.32
LTBP3-207ENST00000526927 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
LTBP3-207ENST00000526927 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms