RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
CTSB-212ENST00000526645 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTSB-212ENST00000526645 ABCC5O15440 1437 aa17.11■□□□□ 0.33
CTSB-212ENST00000526645 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
CTSB-212ENST00000526645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTSB-212ENST00000526645 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
CTSB-212ENST00000526645 PLEKHG1Q9ULL1 1385 aa17.09■□□□□ 0.33
CTSB-212ENST00000526645 CDK12Q9NYV4 1490 aaPredicted RBP17.09■□□□□ 0.33
CTSB-212ENST00000526645 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.32
CTSB-212ENST00000526645 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
CTSB-212ENST00000526645 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
CTSB-212ENST00000526645 DAPK1P53355 1430 aa17.08■□□□□ 0.32
CTSB-212ENST00000526645 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
CTSB-212ENST00000526645 RRP7BPQ9NSQ0 103 aa17.08■□□□□ 0.32
CTSB-212ENST00000526645 BCANQ96GW7 911 aa17.07■□□□□ 0.32
CTSB-212ENST00000526645 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CTSB-212ENST00000526645 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
CTSB-212ENST00000526645 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
CTSB-212ENST00000526645 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
CTSB-212ENST00000526645 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
CTSB-212ENST00000526645 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
CTSB-212ENST00000526645 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
CTSB-212ENST00000526645 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
CTSB-212ENST00000526645 RIMS2Q9UQ26 1411 aa17.03■□□□□ 0.32
CTSB-212ENST00000526645 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
CTSB-212ENST00000526645 RXRBP28702 533 aa17.02■□□□□ 0.32
CTSB-212ENST00000526645 PIK3R4Q99570 1358 aa17.02■□□□□ 0.31
CTSB-212ENST00000526645 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
CTSB-212ENST00000526645 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
CTSB-212ENST00000526645 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
CTSB-212ENST00000526645 C14orf37Q86TY3 774 aa17■□□□□ 0.31
CTSB-212ENST00000526645 DCCP43146 1447 aa16.99■□□□□ 0.31
CTSB-212ENST00000526645 ATF3P18847 181 aa16.99■□□□□ 0.31
CTSB-212ENST00000526645 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
CTSB-212ENST00000526645 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
CTSB-212ENST00000526645 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTSB-212ENST00000526645 ADAMTS13Q76LX8 1427 aa16.96■□□□□ 0.31
CTSB-212ENST00000526645 TRPM2O94759 1503 aa16.96■□□□□ 0.31
CTSB-212ENST00000526645 SETD5Q9C0A6 1442 aa16.95■□□□□ 0.3
CTSB-212ENST00000526645 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
CTSB-212ENST00000526645 ASXL1Q8IXJ9 1541 aa16.94■□□□□ 0.3
CTSB-212ENST00000526645 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
CTSB-212ENST00000526645 AFF2P51816 1311 aa16.93■□□□□ 0.3
CTSB-212ENST00000526645 RGS12O14924 1447 aa16.92■□□□□ 0.3
CTSB-212ENST00000526645 ANKRD50Q9ULJ7 1429 aa16.91■□□□□ 0.3
CTSB-212ENST00000526645 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
CTSB-212ENST00000526645 UNC13BO14795 1591 aa16.9■□□□□ 0.3
CTSB-212ENST00000526645 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
CTSB-212ENST00000526645 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
CTSB-212ENST00000526645 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
CTSB-212ENST00000526645 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
CTSB-212ENST00000526645 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
CTSB-212ENST00000526645 MST1RQ04912 1400 aa16.87■□□□□ 0.29
CTSB-212ENST00000526645 APLP2Q06481 763 aa16.87■□□□□ 0.29
CTSB-212ENST00000526645 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CTSB-212ENST00000526645 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
CTSB-212ENST00000526645 E9PCH4 1651 aa16.86■□□□□ 0.29
CTSB-212ENST00000526645 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
CTSB-212ENST00000526645 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
CTSB-212ENST00000526645 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
CTSB-212ENST00000526645 PNPLA6Q8IY17 1366 aa16.85■□□□□ 0.29
CTSB-212ENST00000526645 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
CTSB-212ENST00000526645 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
CTSB-212ENST00000526645 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
CTSB-212ENST00000526645 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
CTSB-212ENST00000526645 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
CTSB-212ENST00000526645 QTRT2Q9H974 415 aaKnown RBP16.83■□□□□ 0.28
CTSB-212ENST00000526645 NRXN3Q9Y4C0 1643 aa16.83■□□□□ 0.28
CTSB-212ENST00000526645 ADGRL3Q9HAR2 1447 aa16.82■□□□□ 0.28
CTSB-212ENST00000526645 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
CTSB-212ENST00000526645 LAMC1P11047 1609 aa16.81■□□□□ 0.28
CTSB-212ENST00000526645 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
CTSB-212ENST00000526645 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
CTSB-212ENST00000526645 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
CTSB-212ENST00000526645 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
CTSB-212ENST00000526645 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
CTSB-212ENST00000526645 TRPC5Q9UL62 973 aaPredicted RBP16.74■□□□□ 0.27
CTSB-212ENST00000526645 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
CTSB-212ENST00000526645 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
CTSB-212ENST00000526645 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
CTSB-212ENST00000526645 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
CTSB-212ENST00000526645 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
CTSB-212ENST00000526645 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
CTSB-212ENST00000526645 USP21Q9UK80 565 aa16.72■□□□□ 0.27
CTSB-212ENST00000526645 METP08581 1390 aa16.72■□□□□ 0.27
CTSB-212ENST00000526645 ATRNO75882 1429 aa16.71■□□□□ 0.27
CTSB-212ENST00000526645 LOC105371045A0A1W2PR82 267 aa16.71■□□□□ 0.27
CTSB-212ENST00000526645 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
CTSB-212ENST00000526645 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
CTSB-212ENST00000526645 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
CTSB-212ENST00000526645 NUP155O75694 1391 aa16.68■□□□□ 0.26
CTSB-212ENST00000526645 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
CTSB-212ENST00000526645 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
CTSB-212ENST00000526645 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
CTSB-212ENST00000526645 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
CTSB-212ENST00000526645 MYOM2P54296 1465 aa16.66■□□□□ 0.26
CTSB-212ENST00000526645 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
CTSB-212ENST00000526645 EP400Q96L91 3159 aa16.64■□□□□ 0.25
CTSB-212ENST00000526645 LRP5O75197 1615 aa16.62■□□□□ 0.25
CTSB-212ENST00000526645 CLTCL1P53675 1640 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 333 ms