RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 GDF9O60383 454 aa8.35□□□□□ -1.07
COPB1-205ENST00000526527 LIAT1Q6ZQX7 453 aa8.35□□□□□ -1.07
COPB1-205ENST00000526527 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
COPB1-205ENST00000526527 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
COPB1-205ENST00000526527 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
COPB1-205ENST00000526527 SLC4A3P48751 1232 aa8.34□□□□□ -1.07
COPB1-205ENST00000526527 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
COPB1-205ENST00000526527 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
COPB1-205ENST00000526527 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
COPB1-205ENST00000526527 EYA1Q99502 592 aa8.32□□□□□ -1.08
COPB1-205ENST00000526527 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
COPB1-205ENST00000526527 ARIH1Q9Y4X5 557 aaPredicted RBP8.32□□□□□ -1.08
COPB1-205ENST00000526527 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
COPB1-205ENST00000526527 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
COPB1-205ENST00000526527 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
COPB1-205ENST00000526527 TLL1O43897 1013 aa8.29□□□□□ -1.08
COPB1-205ENST00000526527 S1PR4O95977 384 aa8.29□□□□□ -1.08
COPB1-205ENST00000526527 E2F4Q16254 413 aa8.29□□□□□ -1.08
COPB1-205ENST00000526527 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
COPB1-205ENST00000526527 WFS1O76024 890 aa8.26□□□□□ -1.09
COPB1-205ENST00000526527 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
COPB1-205ENST00000526527 CRIPAKQ8N1N5 446 aa8.24□□□□□ -1.09
COPB1-205ENST00000526527 STK17AQ9UEE5 414 aa8.24□□□□□ -1.09
COPB1-205ENST00000526527 DACH1Q9UI36 760 aa8.24□□□□□ -1.09
COPB1-205ENST00000526527 ADH1BP00325 375 aa8.23□□□□□ -1.09
COPB1-205ENST00000526527 KMT5BQ4FZB7 885 aa8.23□□□□□ -1.09
COPB1-205ENST00000526527 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
COPB1-205ENST00000526527 PKD2L1Q9P0L9 805 aa8.23□□□□□ -1.09
COPB1-205ENST00000526527 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
COPB1-205ENST00000526527 DNAJB2P25686 324 aa8.21□□□□□ -1.1
COPB1-205ENST00000526527 SLC6A16Q9GZN6 736 aa8.21□□□□□ -1.1
COPB1-205ENST00000526527 WIPF1O43516 503 aa8.2□□□□□ -1.1
COPB1-205ENST00000526527 AVPP01185 164 aa8.2□□□□□ -1.1
COPB1-205ENST00000526527 FOXC1Q12948 553 aa8.2□□□□□ -1.1
COPB1-205ENST00000526527 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
COPB1-205ENST00000526527 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
COPB1-205ENST00000526527 NR1I2O75469 434 aa8.19□□□□□ -1.1
COPB1-205ENST00000526527 INSM1Q01101 510 aaPredicted RBP8.19□□□□□ -1.1
COPB1-205ENST00000526527 NFX1Q12986 1120 aaKnown RBP8.19□□□□□ -1.1
COPB1-205ENST00000526527 TMEM134Q9H6X4 195 aa8.19□□□□□ -1.1
COPB1-205ENST00000526527 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
COPB1-205ENST00000526527 AXIN1O15169 862 aa8.17□□□□□ -1.1
COPB1-205ENST00000526527 CFHP08603 1231 aa8.17□□□□□ -1.1
COPB1-205ENST00000526527 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
COPB1-205ENST00000526527 TOR4AQ9NXH8 423 aa8.17□□□□□ -1.1
COPB1-205ENST00000526527 CTC1Q2NKJ3 1217 aa8.16□□□□□ -1.1
COPB1-205ENST00000526527 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
COPB1-205ENST00000526527 RBM46Q8TBY0 533 aaKnown RBP8.16□□□□□ -1.1
COPB1-205ENST00000526527 RPIAP49247 311 aa8.15□□□□□ -1.1
COPB1-205ENST00000526527 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
COPB1-205ENST00000526527 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
COPB1-205ENST00000526527 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
COPB1-205ENST00000526527 SLC10A3P09131 477 aa8.14□□□□□ -1.11
COPB1-205ENST00000526527 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
COPB1-205ENST00000526527 CYP4X1Q8N118 509 aa8.14□□□□□ -1.11
COPB1-205ENST00000526527 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
COPB1-205ENST00000526527 CD2BP2O95400 341 aaKnown RBP8.13□□□□□ -1.11
COPB1-205ENST00000526527 ADGRG1Q9Y653 693 aa8.13□□□□□ -1.11
COPB1-205ENST00000526527 CFAP44Q96MT7 982 aa8.12□□□□□ -1.11
COPB1-205ENST00000526527 SPSB2Q99619 263 aa8.12□□□□□ -1.11
COPB1-205ENST00000526527 PTGDRQ13258 359 aa8.11□□□□□ -1.11
COPB1-205ENST00000526527 PAXIP1Q6ZW49 1069 aaPredicted RBP8.11□□□□□ -1.11
COPB1-205ENST00000526527 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
COPB1-205ENST00000526527 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
COPB1-205ENST00000526527 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
COPB1-205ENST00000526527 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
COPB1-205ENST00000526527 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
COPB1-205ENST00000526527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
COPB1-205ENST00000526527 FCF1Q9Y324 198 aaKnown RBP8.06□□□□□ -1.12
COPB1-205ENST00000526527 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
COPB1-205ENST00000526527 TTC24A2A3L6 582 aaPredicted RBP8.05□□□□□ -1.12
COPB1-205ENST00000526527 MLLT3P42568 568 aaPredicted RBP8.05□□□□□ -1.12
COPB1-205ENST00000526527 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
COPB1-205ENST00000526527 ATP13A2Q9NQ11 1180 aa8.05□□□□□ -1.12
COPB1-205ENST00000526527 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
COPB1-205ENST00000526527 THAP11Q96EK4 314 aa8.03□□□□□ -1.12
COPB1-205ENST00000526527 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
COPB1-205ENST00000526527 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
COPB1-205ENST00000526527 SMPD1P17405 629 aa8.02□□□□□ -1.13
COPB1-205ENST00000526527 FAM160A2Q8N612 972 aaPredicted RBP8.02□□□□□ -1.13
COPB1-205ENST00000526527 MORN1Q5T089 497 aa8.01□□□□□ -1.13
COPB1-205ENST00000526527 SNIP1Q8TAD8 396 aaKnown RBP8.01□□□□□ -1.13
COPB1-205ENST00000526527 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
COPB1-205ENST00000526527 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
COPB1-205ENST00000526527 PXYLP1Q8TE99 480 aa8□□□□□ -1.13
COPB1-205ENST00000526527 WNT7AO00755 349 aa7.99□□□□□ -1.13
COPB1-205ENST00000526527 FMNL1O95466 1100 aaPredicted RBP7.99□□□□□ -1.13
COPB1-205ENST00000526527 OATP04181 439 aa7.99□□□□□ -1.13
COPB1-205ENST00000526527 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
COPB1-205ENST00000526527 KIFC2Q96AC6 838 aa7.97□□□□□ -1.13
COPB1-205ENST00000526527 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
COPB1-205ENST00000526527 J3QL48 77 aa7.96□□□□□ -1.14
COPB1-205ENST00000526527 ATP6V1AP38606 617 aa7.96□□□□□ -1.14
COPB1-205ENST00000526527 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
COPB1-205ENST00000526527 ARHGEF1Q92888 912 aaKnown RBP7.96□□□□□ -1.14
COPB1-205ENST00000526527 SLC27A5Q9Y2P5 690 aa7.96□□□□□ -1.14
COPB1-205ENST00000526527 FCHSD2O94868 740 aa7.95□□□□□ -1.14
COPB1-205ENST00000526527 FUT2Q10981 343 aa7.95□□□□□ -1.14
COPB1-205ENST00000526527 BRICD5Q6PL45 260 aa7.95□□□□□ -1.14
COPB1-205ENST00000526527 PRDM9Q9NQV7 894 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms