RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
RPUSD4-202ENST00000525812 ZFYVE9O95405 1425 aa11.61□□□□□ -0.55
RPUSD4-202ENST00000525812 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
RPUSD4-202ENST00000525812 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
RPUSD4-202ENST00000525812 ROBO1Q9Y6N7 1651 aa11.6□□□□□ -0.55
RPUSD4-202ENST00000525812 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
RPUSD4-202ENST00000525812 C19orf44Q9H6X5 657 aa11.6□□□□□ -0.55
RPUSD4-202ENST00000525812 ADGRL2O95490 1459 aa11.59□□□□□ -0.55
RPUSD4-202ENST00000525812 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
RPUSD4-202ENST00000525812 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
RPUSD4-202ENST00000525812 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
RPUSD4-202ENST00000525812 PTPN23Q9H3S7 1636 aa11.57□□□□□ -0.56
RPUSD4-202ENST00000525812 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPUSD4-202ENST00000525812 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
RPUSD4-202ENST00000525812 APLP2Q06481 763 aa11.56□□□□□ -0.56
RPUSD4-202ENST00000525812 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
RPUSD4-202ENST00000525812 CROCC2H7BZ55 1655 aa11.55□□□□□ -0.56
RPUSD4-202ENST00000525812 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
RPUSD4-202ENST00000525812 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
RPUSD4-202ENST00000525812 CHIC2Q9UKJ5 165 aa11.55□□□□□ -0.56
RPUSD4-202ENST00000525812 ADAMTS13Q76LX8 1427 aa11.54□□□□□ -0.56
RPUSD4-202ENST00000525812 BCANQ96GW7 911 aa11.54□□□□□ -0.56
RPUSD4-202ENST00000525812 CDK12Q9NYV4 1490 aaPredicted RBP11.54□□□□□ -0.56
RPUSD4-202ENST00000525812 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
RPUSD4-202ENST00000525812 ATF3P18847 181 aa11.53□□□□□ -0.56
RPUSD4-202ENST00000525812 AHDC1Q5TGY3 1603 aaPredicted RBP11.53□□□□□ -0.56
RPUSD4-202ENST00000525812 DCCP43146 1447 aa11.52□□□□□ -0.56
RPUSD4-202ENST00000525812 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
RPUSD4-202ENST00000525812 RXRBP28702 533 aa11.52□□□□□ -0.57
RPUSD4-202ENST00000525812 TMEM131LA2VDJ0 1609 aa11.52□□□□□ -0.57
RPUSD4-202ENST00000525812 BRINP3Q76B58 766 aa11.51□□□□□ -0.57
RPUSD4-202ENST00000525812 PHLPP1O60346 1717 aa11.51□□□□□ -0.57
RPUSD4-202ENST00000525812 SETD5Q9C0A6 1442 aa11.51□□□□□ -0.57
RPUSD4-202ENST00000525812 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
RPUSD4-202ENST00000525812 LRP6O75581 1613 aa11.5□□□□□ -0.57
RPUSD4-202ENST00000525812 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
RPUSD4-202ENST00000525812 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
RPUSD4-202ENST00000525812 ROCK1Q13464 1354 aa11.48□□□□□ -0.57
RPUSD4-202ENST00000525812 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
RPUSD4-202ENST00000525812 MEX3CQ5U5Q3 659 aaKnown RBP11.47□□□□□ -0.57
RPUSD4-202ENST00000525812 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
RPUSD4-202ENST00000525812 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.57
RPUSD4-202ENST00000525812 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
RPUSD4-202ENST00000525812 RBM6P78332 1123 aaKnown RBP11.45□□□□□ -0.58
RPUSD4-202ENST00000525812 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
RPUSD4-202ENST00000525812 TRPM2O94759 1503 aa11.44□□□□□ -0.58
RPUSD4-202ENST00000525812 MST1RQ04912 1400 aa11.43□□□□□ -0.58
RPUSD4-202ENST00000525812 AFF2P51816 1311 aa11.43□□□□□ -0.58
RPUSD4-202ENST00000525812 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-202ENST00000525812 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-202ENST00000525812 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-202ENST00000525812 UNC13BO14795 1591 aa11.42□□□□□ -0.58
RPUSD4-202ENST00000525812 GCC2Q8IWJ2 1684 aa11.42□□□□□ -0.58
RPUSD4-202ENST00000525812 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 NGLY1Q96IV0 654 aa11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 MYO5BQ9ULV0 1848 aa11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 SETBP1Q9Y6X0 1596 aa11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 SRCAPQ6ZRS2 3230 aa11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 NUP155O75694 1391 aa11.41□□□□□ -0.58
RPUSD4-202ENST00000525812 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
RPUSD4-202ENST00000525812 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
RPUSD4-202ENST00000525812 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
RPUSD4-202ENST00000525812 METP08581 1390 aa11.4□□□□□ -0.59
RPUSD4-202ENST00000525812 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.59
RPUSD4-202ENST00000525812 E9PCH4 1651 aa11.4□□□□□ -0.59
RPUSD4-202ENST00000525812 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 NUTM2BA6NNL0 878 aaPredicted RBP11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 NUTM2EB1AL46 878 aaPredicted RBP11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 NUTM2AQ8IVF1 878 aaPredicted RBP11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 ADGRL3Q9HAR2 1447 aa11.39□□□□□ -0.59
RPUSD4-202ENST00000525812 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
RPUSD4-202ENST00000525812 PRAG1Q86YV5 1406 aa11.38□□□□□ -0.59
RPUSD4-202ENST00000525812 FOXD1Q16676 465 aa11.38□□□□□ -0.59
RPUSD4-202ENST00000525812 XRN1Q8IZH2 1706 aaKnown RBP11.38□□□□□ -0.59
RPUSD4-202ENST00000525812 NHSL1Q5SYE7 1610 aa11.37□□□□□ -0.59
RPUSD4-202ENST00000525812 LAMC1P11047 1609 aa11.36□□□□□ -0.59
RPUSD4-202ENST00000525812 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
RPUSD4-202ENST00000525812 RGS12O14924 1447 aa11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 C8orf37Q96NL8 207 aa11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 TRPC5Q9UL62 973 aaPredicted RBP11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 RPGRIP1LQ68CZ1 1315 aa11.35□□□□□ -0.59
RPUSD4-202ENST00000525812 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
RPUSD4-202ENST00000525812 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-202ENST00000525812 DDX17Q92841 729 aaKnown RBP11.32□□□□□ -0.6
RPUSD4-202ENST00000525812 USP21Q9UK80 565 aa11.32□□□□□ -0.6
RPUSD4-202ENST00000525812 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
RPUSD4-202ENST00000525812 ATRNO75882 1429 aa11.31□□□□□ -0.6
RPUSD4-202ENST00000525812 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
RPUSD4-202ENST00000525812 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
RPUSD4-202ENST00000525812 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
RPUSD4-202ENST00000525812 HFM1A2PYH4 1435 aa11.29□□□□□ -0.6
RPUSD4-202ENST00000525812 NPHP3Q7Z494 1330 aa11.29□□□□□ -0.6
RPUSD4-202ENST00000525812 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
RPUSD4-202ENST00000525812 BCL9LQ86UU0 1499 aa11.28□□□□□ -0.6
RPUSD4-202ENST00000525812 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
RPUSD4-202ENST00000525812 MYOM2P54296 1465 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms