RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 RSPH4AQ5TD94 716 aa14.46□□□□□ -0.1
CLNS1A-204ENST00000525428 BRD4O60885 1362 aaPredicted RBP14.45□□□□□ -0.1
CLNS1A-204ENST00000525428 TRIM44Q96DX7 344 aaPredicted RBP14.45□□□□□ -0.1
CLNS1A-204ENST00000525428 ADGRL1O94910 1474 aa14.45□□□□□ -0.1
CLNS1A-204ENST00000525428 USP19O94966 1318 aa14.45□□□□□ -0.1
CLNS1A-204ENST00000525428 PDCL3Q9H2J4 239 aa14.44□□□□□ -0.1
CLNS1A-204ENST00000525428 FSD2A1L4K1 749 aa14.44□□□□□ -0.1
CLNS1A-204ENST00000525428 RALBP1Q15311 655 aa14.43□□□□□ -0.1
CLNS1A-204ENST00000525428 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
CLNS1A-204ENST00000525428 PLEKHH2Q8IVE3 1493 aa14.42□□□□□ -0.1
CLNS1A-204ENST00000525428 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
CLNS1A-204ENST00000525428 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
CLNS1A-204ENST00000525428 ANKRD30BQ9BXX2 1392 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 CARD11Q9BXL7 1154 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 ANTXR1Q9H6X2 564 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 KIF3BO15066 747 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 TRAK2O60296 914 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 MCM4P33991 863 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 PRDM4Q9UKN5 801 aa14.41□□□□□ -0.1
CLNS1A-204ENST00000525428 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 AAMPQ13685 434 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 KDM2AQ9Y2K7 1162 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 ADGRL2O95490 1459 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 MRE11P49959 708 aa14.4□□□□□ -0.1
CLNS1A-204ENST00000525428 ABCC1P33527 1531 aa14.39□□□□□ -0.11
CLNS1A-204ENST00000525428 RPRD2Q5VT52 1461 aaKnown RBP14.39□□□□□ -0.11
CLNS1A-204ENST00000525428 FAM13BQ9NYF5 915 aa14.39□□□□□ -0.11
CLNS1A-204ENST00000525428 TEX14Q8IWB6 1497 aa14.39□□□□□ -0.11
CLNS1A-204ENST00000525428 TBC1D2Q9BYX2 928 aa14.38□□□□□ -0.11
CLNS1A-204ENST00000525428 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
CLNS1A-204ENST00000525428 IGHDP01880 384 aa14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 TPM2P07951 284 aa14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 CALD1Q05682 793 aaKnown RBP14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 GGT6Q6P531 493 aa14.37□□□□□ -0.11
CLNS1A-204ENST00000525428 SHANK2Q9UPX8 1470 aa14.36□□□□□ -0.11
CLNS1A-204ENST00000525428 CROCC2H7BZ55 1655 aa14.36□□□□□ -0.11
CLNS1A-204ENST00000525428 PZPP20742 1482 aa14.36□□□□□ -0.11
CLNS1A-204ENST00000525428 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
CLNS1A-204ENST00000525428 UPF2Q9HAU5 1272 aaKnown RBP14.34□□□□□ -0.11
CLNS1A-204ENST00000525428 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
CLNS1A-204ENST00000525428 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
CLNS1A-204ENST00000525428 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
CLNS1A-204ENST00000525428 FGD1P98174 961 aa14.33□□□□□ -0.12
CLNS1A-204ENST00000525428 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
CLNS1A-204ENST00000525428 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.33□□□□□ -0.12
CLNS1A-204ENST00000525428 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
CLNS1A-204ENST00000525428 ADGBQ8N7X0 1667 aa14.32□□□□□ -0.12
CLNS1A-204ENST00000525428 BCAR3O75815 825 aa14.31□□□□□ -0.12
CLNS1A-204ENST00000525428 DNAJC5Q9H3Z4 198 aa14.31□□□□□ -0.12
CLNS1A-204ENST00000525428 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
CLNS1A-204ENST00000525428 GAS2L3Q86XJ1 694 aa14.31□□□□□ -0.12
CLNS1A-204ENST00000525428 MLECQ14165 292 aa14.3□□□□□ -0.12
CLNS1A-204ENST00000525428 CENPJQ9HC77 1338 aaPredicted RBP14.29□□□□□ -0.12
CLNS1A-204ENST00000525428 RIPK4P57078 832 aa14.29□□□□□ -0.12
CLNS1A-204ENST00000525428 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
CLNS1A-204ENST00000525428 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 YEATS2Q9ULM3 1422 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 POLR1AO95602 1720 aaPredicted RBP14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
CLNS1A-204ENST00000525428 ZNF518AQ6AHZ1 1483 aa14.27□□□□□ -0.12
CLNS1A-204ENST00000525428 TBC1D32Q96NH3 1257 aa14.27□□□□□ -0.13
CLNS1A-204ENST00000525428 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
CLNS1A-204ENST00000525428 CHMP5Q9NZZ3 219 aa14.27□□□□□ -0.13
CLNS1A-204ENST00000525428 COL17A1Q9UMD9 1497 aaPredicted RBP14.27□□□□□ -0.13
CLNS1A-204ENST00000525428 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
CLNS1A-204ENST00000525428 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
CLNS1A-204ENST00000525428 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 DUOX2Q9NRD8 1548 aa14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 MSNP26038 577 aaKnown RBP14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 PANK1Q8TE04 598 aa14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 RTEL1-TNFRSF6BF6WH68 1400 aa14.25□□□□□ -0.13
CLNS1A-204ENST00000525428 PARD3Q8TEW0 1356 aa14.24□□□□□ -0.13
CLNS1A-204ENST00000525428 PDE4CQ08493 712 aa14.24□□□□□ -0.13
CLNS1A-204ENST00000525428 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
CLNS1A-204ENST00000525428 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
CLNS1A-204ENST00000525428 FAM135AQ9P2D6 1515 aa14.24□□□□□ -0.13
CLNS1A-204ENST00000525428 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
CLNS1A-204ENST00000525428 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLNS1A-204ENST00000525428 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
CLNS1A-204ENST00000525428 MAST1Q9Y2H9 1570 aa14.23□□□□□ -0.13
CLNS1A-204ENST00000525428 NEO1Q92859 1461 aa14.23□□□□□ -0.13
CLNS1A-204ENST00000525428 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
CLNS1A-204ENST00000525428 MAP3K4Q9Y6R4 1608 aa14.22□□□□□ -0.13
CLNS1A-204ENST00000525428 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
CLNS1A-204ENST00000525428 PER1O15534 1290 aaPredicted RBP14.22□□□□□ -0.13
CLNS1A-204ENST00000525428 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
CLNS1A-204ENST00000525428 OFD1O75665 1012 aa14.21□□□□□ -0.13
CLNS1A-204ENST00000525428 ZSCAN30Q86W11 494 aa14.21□□□□□ -0.13
CLNS1A-204ENST00000525428 PANK3Q9H999 370 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms