RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
CLNS1A-202ENST00000525064 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
CLNS1A-202ENST00000525064 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
CLNS1A-202ENST00000525064 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.49
CLNS1A-202ENST00000525064 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
CLNS1A-202ENST00000525064 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
CLNS1A-202ENST00000525064 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
CLNS1A-202ENST00000525064 NUP155O75694 1391 aa18.11■□□□□ 0.49
CLNS1A-202ENST00000525064 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
CLNS1A-202ENST00000525064 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
CLNS1A-202ENST00000525064 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
CLNS1A-202ENST00000525064 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
CLNS1A-202ENST00000525064 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
CLNS1A-202ENST00000525064 CHGAP10645 457 aaKnown RBP18.08■□□□□ 0.48
CLNS1A-202ENST00000525064 KCNA6P17658 529 aa18.08■□□□□ 0.48
CLNS1A-202ENST00000525064 NUTM2DQ5VT03 806 aaPredicted RBP18.06■□□□□ 0.48
CLNS1A-202ENST00000525064 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
CLNS1A-202ENST00000525064 BCANQ96GW7 911 aa18.05■□□□□ 0.48
CLNS1A-202ENST00000525064 ADAMTS13Q76LX8 1427 aa18.05■□□□□ 0.48
CLNS1A-202ENST00000525064 SOCS7O14512 581 aa18.04■□□□□ 0.48
CLNS1A-202ENST00000525064 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
CLNS1A-202ENST00000525064 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
CLNS1A-202ENST00000525064 NAIPQ13075 1403 aa18.04■□□□□ 0.48
CLNS1A-202ENST00000525064 CLTCL1P53675 1640 aa18.03■□□□□ 0.48
CLNS1A-202ENST00000525064 NRXN3Q9Y4C0 1643 aa18.03■□□□□ 0.48
CLNS1A-202ENST00000525064 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
CLNS1A-202ENST00000525064 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
CLNS1A-202ENST00000525064 KIF1BO60333 1816 aa17.99■□□□□ 0.47
CLNS1A-202ENST00000525064 TRPM2O94759 1503 aa17.98■□□□□ 0.47
CLNS1A-202ENST00000525064 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLNS1A-202ENST00000525064 TBX22Q9Y458 520 aa17.98■□□□□ 0.47
CLNS1A-202ENST00000525064 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
CLNS1A-202ENST00000525064 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
CLNS1A-202ENST00000525064 PTPRUQ92729 1446 aa17.97■□□□□ 0.47
CLNS1A-202ENST00000525064 MSH6P52701 1360 aa17.96■□□□□ 0.47
CLNS1A-202ENST00000525064 NEXMIFQ5QGS0 1516 aa17.96■□□□□ 0.47
CLNS1A-202ENST00000525064 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.46
CLNS1A-202ENST00000525064 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
CLNS1A-202ENST00000525064 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
CLNS1A-202ENST00000525064 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
CLNS1A-202ENST00000525064 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
CLNS1A-202ENST00000525064 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
CLNS1A-202ENST00000525064 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
CLNS1A-202ENST00000525064 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.46
CLNS1A-202ENST00000525064 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
CLNS1A-202ENST00000525064 SLAIN2Q9P270 581 aa17.88■□□□□ 0.45
CLNS1A-202ENST00000525064 PPLO60437 1756 aa17.87■□□□□ 0.45
CLNS1A-202ENST00000525064 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
CLNS1A-202ENST00000525064 AMOTL2Q9Y2J4 779 aa17.87■□□□□ 0.45
CLNS1A-202ENST00000525064 METP08581 1390 aa17.87■□□□□ 0.45
CLNS1A-202ENST00000525064 RGS17Q9UGC6 210 aaPredicted RBP17.86■□□□□ 0.45
CLNS1A-202ENST00000525064 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
CLNS1A-202ENST00000525064 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
CLNS1A-202ENST00000525064 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.45
CLNS1A-202ENST00000525064 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
CLNS1A-202ENST00000525064 FOXD1Q16676 465 aa17.81■□□□□ 0.44
CLNS1A-202ENST00000525064 C19orf44Q9H6X5 657 aa17.81■□□□□ 0.44
CLNS1A-202ENST00000525064 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
CLNS1A-202ENST00000525064 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
CLNS1A-202ENST00000525064 CADPS2Q86UW7 1296 aa17.79■□□□□ 0.44
CLNS1A-202ENST00000525064 DCCP43146 1447 aa17.79■□□□□ 0.44
CLNS1A-202ENST00000525064 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
CLNS1A-202ENST00000525064 ATF3P18847 181 aa17.78■□□□□ 0.44
CLNS1A-202ENST00000525064 LRP6O75581 1613 aa17.78■□□□□ 0.44
CLNS1A-202ENST00000525064 MST1RQ04912 1400 aa17.78■□□□□ 0.44
CLNS1A-202ENST00000525064 JCADQ9P266 1359 aa17.78■□□□□ 0.44
CLNS1A-202ENST00000525064 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
CLNS1A-202ENST00000525064 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
CLNS1A-202ENST00000525064 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
CLNS1A-202ENST00000525064 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
CLNS1A-202ENST00000525064 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
CLNS1A-202ENST00000525064 ROBO2Q9HCK4 1378 aa17.72■□□□□ 0.43
CLNS1A-202ENST00000525064 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
CLNS1A-202ENST00000525064 CCDC144AA2RUR9 1427 aa17.71■□□□□ 0.43
CLNS1A-202ENST00000525064 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
CLNS1A-202ENST00000525064 PRAG1Q86YV5 1406 aa17.71■□□□□ 0.43
CLNS1A-202ENST00000525064 RPGRIP1LQ68CZ1 1315 aa17.71■□□□□ 0.42
CLNS1A-202ENST00000525064 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
CLNS1A-202ENST00000525064 ADGRF5Q8IZF2 1346 aa17.69■□□□□ 0.42
CLNS1A-202ENST00000525064 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
CLNS1A-202ENST00000525064 C1orf167Q5SNV9 1468 aa17.68■□□□□ 0.42
CLNS1A-202ENST00000525064 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
CLNS1A-202ENST00000525064 LAMC1P11047 1609 aa17.67■□□□□ 0.42
CLNS1A-202ENST00000525064 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
CLNS1A-202ENST00000525064 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
CLNS1A-202ENST00000525064 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
CLNS1A-202ENST00000525064 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
CLNS1A-202ENST00000525064 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
CLNS1A-202ENST00000525064 PIK3C2GO75747 1445 aa17.62■□□□□ 0.41
CLNS1A-202ENST00000525064 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
CLNS1A-202ENST00000525064 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
CLNS1A-202ENST00000525064 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
CLNS1A-202ENST00000525064 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
CLNS1A-202ENST00000525064 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
CLNS1A-202ENST00000525064 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
CLNS1A-202ENST00000525064 ANKRD30BQ9BXX2 1392 aa17.6■□□□□ 0.41
CLNS1A-202ENST00000525064 TECPR2O15040 1411 aa17.6■□□□□ 0.41
CLNS1A-202ENST00000525064 PLEKHH1Q9ULM0 1364 aa17.58■□□□□ 0.4
CLNS1A-202ENST00000525064 STK26Q9P289 416 aa17.58■□□□□ 0.4
CLNS1A-202ENST00000525064 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms