RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 RIMS2Q9UQ26 1411 aa31.2■■■□□ 2.59
TRAPPC9-215ENST00000524162 CLTCL1P53675 1640 aa31.18■■■□□ 2.58
TRAPPC9-215ENST00000524162 KIF1BO60333 1816 aa31.18■■■□□ 2.58
TRAPPC9-215ENST00000524162 PLEKHG1Q9ULL1 1385 aa31.17■■■□□ 2.58
TRAPPC9-215ENST00000524162 STRCP1A6NGW2 1772 aa31.15■■■□□ 2.58
TRAPPC9-215ENST00000524162 HRCP23327 699 aa31.14■■■□□ 2.58
TRAPPC9-215ENST00000524162 CHGAP10645 457 aaKnown RBP31.12■■■□□ 2.57
TRAPPC9-215ENST00000524162 MPHOSPH9Q99550 1183 aa31.11■■■□□ 2.57
TRAPPC9-215ENST00000524162 RAB3GAP2Q9H2M9 1393 aa31.1■■■□□ 2.57
TRAPPC9-215ENST00000524162 DIP2AQ14689 1571 aa31.08■■■□□ 2.57
TRAPPC9-215ENST00000524162 PPP1R15AO75807 674 aaPredicted RBP31.07■■■□□ 2.56
TRAPPC9-215ENST00000524162 LRRC7Q96NW7 1537 aa31.05■■■□□ 2.56
TRAPPC9-215ENST00000524162 TBX22Q9Y458 520 aa31.04■■■□□ 2.56
TRAPPC9-215ENST00000524162 NWD1Q149M9 1564 aa31.04■■■□□ 2.56
TRAPPC9-215ENST00000524162 CHD2O14647 1828 aaKnown RBP31.03■■■□□ 2.56
TRAPPC9-215ENST00000524162 KCNA6P17658 529 aa31.02■■■□□ 2.56
TRAPPC9-215ENST00000524162 NEXMIFQ5QGS0 1516 aa31.02■■■□□ 2.56
TRAPPC9-215ENST00000524162 SLC26A8Q96RN1 970 aa31.01■■■□□ 2.55
TRAPPC9-215ENST00000524162 PIK3R4Q99570 1358 aa31.01■■■□□ 2.55
TRAPPC9-215ENST00000524162 NKTRP30414 1462 aaKnown RBP31■■■□□ 2.55
TRAPPC9-215ENST00000524162 SETBP1Q9Y6X0 1596 aa31■■■□□ 2.55
TRAPPC9-215ENST00000524162 RPGRIP1LQ68CZ1 1315 aa30.99■■■□□ 2.55
TRAPPC9-215ENST00000524162 ADAMTS13Q76LX8 1427 aa30.99■■■□□ 2.55
TRAPPC9-215ENST00000524162 CCDC144AA2RUR9 1427 aa30.98■■■□□ 2.55
TRAPPC9-215ENST00000524162 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
TRAPPC9-215ENST00000524162 XIRP1Q702N8 1843 aaKnown RBP30.96■■■□□ 2.55
TRAPPC9-215ENST00000524162 BCANQ96GW7 911 aa30.96■■■□□ 2.55
TRAPPC9-215ENST00000524162 NRXN3Q9Y4C0 1643 aa30.95■■■□□ 2.54
TRAPPC9-215ENST00000524162 FOXD1Q16676 465 aa30.94■■■□□ 2.54
TRAPPC9-215ENST00000524162 PPLO60437 1756 aa30.92■■■□□ 2.54
TRAPPC9-215ENST00000524162 UBAP1LF5GYI3 381 aa30.92■■■□□ 2.54
TRAPPC9-215ENST00000524162 TOM1O60784 492 aa30.92■■■□□ 2.54
TRAPPC9-215ENST00000524162 SPATA31E1Q6ZUB1 1445 aa30.9■■■□□ 2.54
TRAPPC9-215ENST00000524162 VGFO15240 615 aaPredicted RBP30.9■■■□□ 2.54
TRAPPC9-215ENST00000524162 NUTM2DQ5VT03 806 aaPredicted RBP30.89■■■□□ 2.54
TRAPPC9-215ENST00000524162 NCOA3Q9Y6Q9 1424 aa30.86■■■□□ 2.53
TRAPPC9-215ENST00000524162 IFT172Q9UG01 1749 aa30.84■■■□□ 2.53
TRAPPC9-215ENST00000524162 ALKQ9UM73 1620 aa30.84■■■□□ 2.53
TRAPPC9-215ENST00000524162 TMEM94Q12767 1356 aa30.83■■■□□ 2.53
TRAPPC9-215ENST00000524162 ANKRD30BQ9BXX2 1392 aa30.81■■■□□ 2.52
TRAPPC9-215ENST00000524162 PROSER2Q86WR7 435 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC9-215ENST00000524162 XRN1Q8IZH2 1706 aaKnown RBP30.8■■■□□ 2.52
TRAPPC9-215ENST00000524162 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
TRAPPC9-215ENST00000524162 PTPRUQ92729 1446 aa30.75■■■□□ 2.51
TRAPPC9-215ENST00000524162 PRAG1Q86YV5 1406 aa30.73■■■□□ 2.51
TRAPPC9-215ENST00000524162 SENP3Q9H4L4 574 aaPredicted RBP30.73■■■□□ 2.51
TRAPPC9-215ENST00000524162 AMOTL2Q9Y2J4 779 aa30.73■■■□□ 2.51
TRAPPC9-215ENST00000524162 METP08581 1390 aa30.73■■■□□ 2.51
TRAPPC9-215ENST00000524162 MSH6P52701 1360 aa30.7■■■□□ 2.51
TRAPPC9-215ENST00000524162 RGL3Q3MIN7 710 aa30.68■■■□□ 2.5
TRAPPC9-215ENST00000524162 MYOM2P54296 1465 aa30.67■■■□□ 2.5
TRAPPC9-215ENST00000524162 PIK3C2GO75747 1445 aa30.65■■■□□ 2.5
TRAPPC9-215ENST00000524162 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
TRAPPC9-215ENST00000524162 NRXN1Q9ULB1 1477 aa30.65■■■□□ 2.5
TRAPPC9-215ENST00000524162 PIP4K2BP78356 416 aa30.65■■■□□ 2.5
TRAPPC9-215ENST00000524162 STAC3Q96MF2 364 aa30.65■■■□□ 2.5
TRAPPC9-215ENST00000524162 ADGRF5Q8IZF2 1346 aa30.64■■■□□ 2.5
TRAPPC9-215ENST00000524162 PTCH1Q13635 1447 aa30.64■■■□□ 2.49
TRAPPC9-215ENST00000524162 C19orf44Q9H6X5 657 aa30.63■■■□□ 2.49
TRAPPC9-215ENST00000524162 DCCP43146 1447 aa30.63■■■□□ 2.49
TRAPPC9-215ENST00000524162 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.61■■■□□ 2.49
TRAPPC9-215ENST00000524162 LAMC1P11047 1609 aa30.6■■■□□ 2.49
TRAPPC9-215ENST00000524162 SCAF1Q9H7N4 1312 aaKnown RBP30.6■■■□□ 2.49
TRAPPC9-215ENST00000524162 RBM33Q96EV2 1170 aaKnown RBP30.59■■■□□ 2.49
TRAPPC9-215ENST00000524162 CADPS2Q86UW7 1296 aa30.57■■■□□ 2.48
TRAPPC9-215ENST00000524162 TRIM26Q12899 539 aaPredicted RBP30.56■■■□□ 2.48
TRAPPC9-215ENST00000524162 HSPA1LP34931 641 aa30.55■■■□□ 2.48
TRAPPC9-215ENST00000524162 TECPR2O15040 1411 aa30.55■■■□□ 2.48
TRAPPC9-215ENST00000524162 SLAIN2Q9P270 581 aa30.54■■■□□ 2.48
TRAPPC9-215ENST00000524162 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
TRAPPC9-215ENST00000524162 ADGRL3Q9HAR2 1447 aa30.53■■■□□ 2.48
TRAPPC9-215ENST00000524162 KNDC1Q76NI1 1749 aa30.53■■■□□ 2.48
TRAPPC9-215ENST00000524162 ROBO1Q9Y6N7 1651 aa30.52■■■□□ 2.48
TRAPPC9-215ENST00000524162 C14orf93Q9H972 538 aaKnown RBP30.52■■■□□ 2.48
TRAPPC9-215ENST00000524162 ATF3P18847 181 aa30.5■■■□□ 2.47
TRAPPC9-215ENST00000524162 LRPPRCP42704 1394 aaKnown RBP30.5■■■□□ 2.47
TRAPPC9-215ENST00000524162 ABCC11Q96J66 1382 aa30.5■■■□□ 2.47
TRAPPC9-215ENST00000524162 ASXL1Q8IXJ9 1541 aa30.49■■■□□ 2.47
TRAPPC9-215ENST00000524162 NALCNQ8IZF0 1738 aa30.49■■■□□ 2.47
TRAPPC9-215ENST00000524162 ROBO2Q9HCK4 1378 aa30.49■■■□□ 2.47
TRAPPC9-215ENST00000524162 SIRT1Q96EB6 747 aa30.45■■■□□ 2.47
TRAPPC9-215ENST00000524162 DHX57Q6P158 1386 aaKnown RBP30.44■■■□□ 2.46
TRAPPC9-215ENST00000524162 YTHDC2Q9H6S0 1430 aaKnown RBP30.43■■■□□ 2.46
TRAPPC9-215ENST00000524162 DCAF11Q8TEB1 546 aa30.42■■■□□ 2.46
TRAPPC9-215ENST00000524162 MST1RQ04912 1400 aa30.39■■■□□ 2.46
TRAPPC9-215ENST00000524162 CFAP70Q5T0N1 1121 aa30.38■■■□□ 2.45
TRAPPC9-215ENST00000524162 ADGRB1O14514 1584 aa30.37■■■□□ 2.45
TRAPPC9-215ENST00000524162 TMEM132EQ6IEE7 984 aa30.36■■■□□ 2.45
TRAPPC9-215ENST00000524162 DLC1Q96QB1 1528 aa30.36■■■□□ 2.45
TRAPPC9-215ENST00000524162 CDC42BPGQ6DT37 1551 aa30.36■■■□□ 2.45
TRAPPC9-215ENST00000524162 AHDC1Q5TGY3 1603 aaPredicted RBP30.36■■■□□ 2.45
TRAPPC9-215ENST00000524162 KIAA1210Q9ULL0 1709 aa30.36■■■□□ 2.45
TRAPPC9-215ENST00000524162 PHLPP1O60346 1717 aa30.34■■■□□ 2.45
TRAPPC9-215ENST00000524162 STK26Q9P289 416 aa30.31■■■□□ 2.44
TRAPPC9-215ENST00000524162 KDM2AQ9Y2K7 1162 aa30.31■■■□□ 2.44
TRAPPC9-215ENST00000524162 BRINP3Q76B58 766 aa30.3■■■□□ 2.44
TRAPPC9-215ENST00000524162 COL16A1Q07092 1604 aaPredicted RBP30.29■■■□□ 2.44
TRAPPC9-215ENST00000524162 NHSL1Q5SYE7 1610 aa30.28■■■□□ 2.44
TRAPPC9-215ENST00000524162 C1orf167Q5SNV9 1468 aa30.27■■■□□ 2.44
TRAPPC9-215ENST00000524162 MED1Q15648 1581 aaPredicted RBP30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms