RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
SPIDR-224ENST00000524126 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
SPIDR-224ENST00000524126 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
SPIDR-224ENST00000524126 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.33
SPIDR-224ENST00000524126 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
SPIDR-224ENST00000524126 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
SPIDR-224ENST00000524126 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
SPIDR-224ENST00000524126 GAS2L3Q86XJ1 694 aa13□□□□□ -0.33
SPIDR-224ENST00000524126 MYO5CQ9NQX4 1742 aa13□□□□□ -0.33
SPIDR-224ENST00000524126 ASXL2Q76L83 1435 aa13□□□□□ -0.33
SPIDR-224ENST00000524126 RALBP1Q15311 655 aa13□□□□□ -0.33
SPIDR-224ENST00000524126 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-224ENST00000524126 VIRMAQ69YN4 1812 aaKnown RBP12.99□□□□□ -0.33
SPIDR-224ENST00000524126 IGHDP01880 384 aa12.99□□□□□ -0.33
SPIDR-224ENST00000524126 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
SPIDR-224ENST00000524126 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
SPIDR-224ENST00000524126 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
SPIDR-224ENST00000524126 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
SPIDR-224ENST00000524126 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
SPIDR-224ENST00000524126 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
SPIDR-224ENST00000524126 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
SPIDR-224ENST00000524126 ADGBQ8N7X0 1667 aa12.97□□□□□ -0.33
SPIDR-224ENST00000524126 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-224ENST00000524126 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
SPIDR-224ENST00000524126 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
SPIDR-224ENST00000524126 OFD1O75665 1012 aa12.96□□□□□ -0.33
SPIDR-224ENST00000524126 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-224ENST00000524126 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.34
SPIDR-224ENST00000524126 PLCH2O75038 1416 aa12.96□□□□□ -0.34
SPIDR-224ENST00000524126 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
SPIDR-224ENST00000524126 ANKRD50Q9ULJ7 1429 aa12.95□□□□□ -0.34
SPIDR-224ENST00000524126 KDM5CP41229 1560 aa12.95□□□□□ -0.34
SPIDR-224ENST00000524126 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
SPIDR-224ENST00000524126 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
SPIDR-224ENST00000524126 ADGRL2O95490 1459 aa12.94□□□□□ -0.34
SPIDR-224ENST00000524126 PZPP20742 1482 aa12.94□□□□□ -0.34
SPIDR-224ENST00000524126 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
SPIDR-224ENST00000524126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■■■□□ 15.2
SPIDR-224ENST00000524126 NPM1P06748 294 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPIDR-224ENST00000524126 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-224ENST00000524126 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 BLMP54132 1417 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-224ENST00000524126 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 UQCRHP07919 91 aa12.92□□□□□ -0.34
SPIDR-224ENST00000524126 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
SPIDR-224ENST00000524126 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 PKD2Q13563 968 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
SPIDR-224ENST00000524126 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
SPIDR-224ENST00000524126 AEBP2Q6ZN18 517 aaPredicted RBP12.91□□□□□ -0.34
SPIDR-224ENST00000524126 NUP155O75694 1391 aa12.9□□□□□ -0.34
SPIDR-224ENST00000524126 NAP1L2Q9ULW6 460 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-224ENST00000524126 MSNP26038 577 aaKnown RBP12.9□□□□□ -0.35
SPIDR-224ENST00000524126 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.35
SPIDR-224ENST00000524126 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 FANCAO15360 1455 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 DMTNQ08495 405 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-224ENST00000524126 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
SPIDR-224ENST00000524126 SHANK2Q9UPX8 1470 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 ABCC1P33527 1531 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 BCAR3O75815 825 aa12.89□□□□□ -0.35
SPIDR-224ENST00000524126 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
SPIDR-224ENST00000524126 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-224ENST00000524126 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
SPIDR-224ENST00000524126 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
SPIDR-224ENST00000524126 ABCA9Q8IUA7 1624 aa12.87□□□□□ -0.35
SPIDR-224ENST00000524126 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
SPIDR-224ENST00000524126 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
SPIDR-224ENST00000524126 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
SPIDR-224ENST00000524126 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
SPIDR-224ENST00000524126 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-224ENST00000524126 ZSCAN20P17040 1043 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-224ENST00000524126 TERF1P54274 439 aa12.86□□□□□ -0.35
SPIDR-224ENST00000524126 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
SPIDR-224ENST00000524126 E9PCH4 1651 aa12.86□□□□□ -0.35
SPIDR-224ENST00000524126 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
SPIDR-224ENST00000524126 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-224ENST00000524126 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
SPIDR-224ENST00000524126 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
SPIDR-224ENST00000524126 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
SPIDR-224ENST00000524126 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
SPIDR-224ENST00000524126 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
SPIDR-224ENST00000524126 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
SPIDR-224ENST00000524126 JARID2Q92833 1246 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-224ENST00000524126 CD109Q6YHK3 1445 aa12.83□□□□□ -0.36
SPIDR-224ENST00000524126 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
SPIDR-224ENST00000524126 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-224ENST00000524126 MFAP1P55081 439 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms