RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 NUP155O75694 1391 aa19.21■□□□□ 0.67
MCM4-216ENST00000524086 TET3O43151 1660 aa19.21■□□□□ 0.67
MCM4-216ENST00000524086 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
MCM4-216ENST00000524086 ITGAEP38570 1179 aa19.2■□□□□ 0.66
MCM4-216ENST00000524086 ALKQ9UM73 1620 aa19.2■□□□□ 0.66
MCM4-216ENST00000524086 RIMS2Q9UQ26 1411 aa19.19■□□□□ 0.66
MCM4-216ENST00000524086 NKTRP30414 1462 aaKnown RBP19.18■□□□□ 0.66
MCM4-216ENST00000524086 MSH6P52701 1360 aa19.18■□□□□ 0.66
MCM4-216ENST00000524086 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
MCM4-216ENST00000524086 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
MCM4-216ENST00000524086 UNC13BO14795 1591 aa19.16■□□□□ 0.66
MCM4-216ENST00000524086 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
MCM4-216ENST00000524086 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
MCM4-216ENST00000524086 SLAIN2Q9P270 581 aa19.15■□□□□ 0.66
MCM4-216ENST00000524086 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
MCM4-216ENST00000524086 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
MCM4-216ENST00000524086 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
MCM4-216ENST00000524086 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
MCM4-216ENST00000524086 C14orf37Q86TY3 774 aa19.1■□□□□ 0.65
MCM4-216ENST00000524086 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
MCM4-216ENST00000524086 C19orf44Q9H6X5 657 aa19.1■□□□□ 0.65
MCM4-216ENST00000524086 IQGAP3Q86VI3 1631 aa19.1■□□□□ 0.65
MCM4-216ENST00000524086 CADPS2Q86UW7 1296 aa19.09■□□□□ 0.65
MCM4-216ENST00000524086 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
MCM4-216ENST00000524086 ATF3P18847 181 aa19.07■□□□□ 0.64
MCM4-216ENST00000524086 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
MCM4-216ENST00000524086 NUTM2DQ5VT03 806 aaPredicted RBP19.06■□□□□ 0.64
MCM4-216ENST00000524086 E9PCH4 1651 aa19.05■□□□□ 0.64
MCM4-216ENST00000524086 XIRP1Q702N8 1843 aaKnown RBP19.05■□□□□ 0.64
MCM4-216ENST00000524086 AMOTL2Q9Y2J4 779 aa19.05■□□□□ 0.64
MCM4-216ENST00000524086 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
MCM4-216ENST00000524086 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
MCM4-216ENST00000524086 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
MCM4-216ENST00000524086 CHD2O14647 1828 aaKnown RBP19.01■□□□□ 0.63
MCM4-216ENST00000524086 JCADQ9P266 1359 aa19■□□□□ 0.63
MCM4-216ENST00000524086 VGFO15240 615 aaPredicted RBP18.99■□□□□ 0.63
MCM4-216ENST00000524086 TRPM2O94759 1503 aa18.99■□□□□ 0.63
MCM4-216ENST00000524086 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
MCM4-216ENST00000524086 RGS17Q9UGC6 210 aaPredicted RBP18.98■□□□□ 0.63
MCM4-216ENST00000524086 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
MCM4-216ENST00000524086 NAIPQ13075 1403 aa18.97■□□□□ 0.63
MCM4-216ENST00000524086 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
MCM4-216ENST00000524086 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
MCM4-216ENST00000524086 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
MCM4-216ENST00000524086 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
MCM4-216ENST00000524086 DCCP43146 1447 aa18.94■□□□□ 0.62
MCM4-216ENST00000524086 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
MCM4-216ENST00000524086 HFM1A2PYH4 1435 aa18.92■□□□□ 0.62
MCM4-216ENST00000524086 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
MCM4-216ENST00000524086 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
MCM4-216ENST00000524086 SPHKAPQ2M3C7 1700 aa18.9■□□□□ 0.62
MCM4-216ENST00000524086 BRINP3Q76B58 766 aa18.89■□□□□ 0.61
MCM4-216ENST00000524086 METP08581 1390 aa18.89■□□□□ 0.61
MCM4-216ENST00000524086 MEX3CQ5U5Q3 659 aaKnown RBP18.88■□□□□ 0.61
MCM4-216ENST00000524086 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
MCM4-216ENST00000524086 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
MCM4-216ENST00000524086 PHLPP1O60346 1717 aa18.87■□□□□ 0.61
MCM4-216ENST00000524086 LRRC59Q96AG4 307 aaKnown RBP18.87■□□□□ 0.61
MCM4-216ENST00000524086 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
MCM4-216ENST00000524086 AHDC1Q5TGY3 1603 aaPredicted RBP18.83■□□□□ 0.61
MCM4-216ENST00000524086 NEXMIFQ5QGS0 1516 aa18.82■□□□□ 0.6
MCM4-216ENST00000524086 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
MCM4-216ENST00000524086 CLTCL1P53675 1640 aa18.82■□□□□ 0.6
MCM4-216ENST00000524086 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
MCM4-216ENST00000524086 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
MCM4-216ENST00000524086 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
MCM4-216ENST00000524086 MST1RQ04912 1400 aa18.8■□□□□ 0.6
MCM4-216ENST00000524086 SETD5Q9C0A6 1442 aa18.8■□□□□ 0.6
MCM4-216ENST00000524086 KIF1BO60333 1816 aa18.79■□□□□ 0.6
MCM4-216ENST00000524086 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
MCM4-216ENST00000524086 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
MCM4-216ENST00000524086 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
MCM4-216ENST00000524086 ASXL1Q8IXJ9 1541 aa18.76■□□□□ 0.59
MCM4-216ENST00000524086 NUTM2BA6NNL0 878 aaPredicted RBP18.76■□□□□ 0.59
MCM4-216ENST00000524086 NUTM2EB1AL46 878 aaPredicted RBP18.76■□□□□ 0.59
MCM4-216ENST00000524086 NUTM2AQ8IVF1 878 aaPredicted RBP18.76■□□□□ 0.59
MCM4-216ENST00000524086 ANKRD30BQ9BXX2 1392 aa18.76■□□□□ 0.59
MCM4-216ENST00000524086 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
MCM4-216ENST00000524086 RXRBP28702 533 aa18.74■□□□□ 0.59
MCM4-216ENST00000524086 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
MCM4-216ENST00000524086 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
MCM4-216ENST00000524086 C1orf167Q5SNV9 1468 aa18.72■□□□□ 0.59
MCM4-216ENST00000524086 FOXD1Q16676 465 aa18.72■□□□□ 0.59
MCM4-216ENST00000524086 SHPRHQ149N8 1683 aa18.72■□□□□ 0.59
MCM4-216ENST00000524086 LRP6O75581 1613 aa18.71■□□□□ 0.58
MCM4-216ENST00000524086 SOS2Q07890 1332 aaPredicted RBP18.7■□□□□ 0.58
MCM4-216ENST00000524086 SIRT1Q96EB6 747 aa18.68■□□□□ 0.58
MCM4-216ENST00000524086 ORAI2Q96SN7 254 aa18.68■□□□□ 0.58
MCM4-216ENST00000524086 AFF2P51816 1311 aa18.68■□□□□ 0.58
MCM4-216ENST00000524086 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
MCM4-216ENST00000524086 PNPLA6Q8IY17 1366 aa18.68■□□□□ 0.58
MCM4-216ENST00000524086 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
MCM4-216ENST00000524086 LRPPRCP42704 1394 aaKnown RBP18.67■□□□□ 0.58
MCM4-216ENST00000524086 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
MCM4-216ENST00000524086 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
MCM4-216ENST00000524086 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
MCM4-216ENST00000524086 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
MCM4-216ENST00000524086 NGLY1Q96IV0 654 aa18.66■□□□□ 0.58
MCM4-216ENST00000524086 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
MCM4-216ENST00000524086 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms