RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
PCM1-219ENST00000523540 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
PCM1-219ENST00000523540 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
PCM1-219ENST00000523540 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
PCM1-219ENST00000523540 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
PCM1-219ENST00000523540 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
PCM1-219ENST00000523540 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
PCM1-219ENST00000523540 GGCXP38435 758 aa10.81□□□□□ -0.68
PCM1-219ENST00000523540 COPS2P61201 443 aa10.81□□□□□ -0.68
PCM1-219ENST00000523540 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
PCM1-219ENST00000523540 EYA1Q99502 592 aa10.81□□□□□ -0.68
PCM1-219ENST00000523540 ZPR1O75312 459 aa10.8□□□□□ -0.68
PCM1-219ENST00000523540 PTGDRQ13258 359 aa10.8□□□□□ -0.68
PCM1-219ENST00000523540 FCHSD2O94868 740 aa10.79□□□□□ -0.68
PCM1-219ENST00000523540 ZNF787Q6DD87 383 aa10.78□□□□□ -0.68
PCM1-219ENST00000523540 TRIM67Q6ZTA4 783 aa10.78□□□□□ -0.68
PCM1-219ENST00000523540 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
PCM1-219ENST00000523540 GPR37O15354 613 aa10.77□□□□□ -0.69
PCM1-219ENST00000523540 HIC1Q14526 733 aa10.77□□□□□ -0.69
PCM1-219ENST00000523540 GPIHBP1Q8IV16 184 aa10.77□□□□□ -0.69
PCM1-219ENST00000523540 ZC3H15Q8WU90 426 aaKnown RBP10.74□□□□□ -0.69
PCM1-219ENST00000523540 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
PCM1-219ENST00000523540 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
PCM1-219ENST00000523540 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
PCM1-219ENST00000523540 PCDHB3Q9Y5E6 796 aa10.73□□□□□ -0.69
PCM1-219ENST00000523540 BLOC1S3Q6QNY0 202 aa10.72□□□□□ -0.69
PCM1-219ENST00000523540 ZNF775Q96BV0 537 aaPredicted RBP10.72□□□□□ -0.69
PCM1-219ENST00000523540 GNPATO15228 680 aa10.71□□□□□ -0.69
PCM1-219ENST00000523540 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
PCM1-219ENST00000523540 SLC19A1P41440 591 aa10.7□□□□□ -0.7
PCM1-219ENST00000523540 PRR20EP86478 221 aa10.69□□□□□ -0.7
PCM1-219ENST00000523540 PRR20CP86479 221 aa10.69□□□□□ -0.7
PCM1-219ENST00000523540 PRR20DP86480 221 aa10.69□□□□□ -0.7
PCM1-219ENST00000523540 PRR20BP86481 221 aa10.69□□□□□ -0.7
PCM1-219ENST00000523540 PRR20AP86496 221 aa10.69□□□□□ -0.7
PCM1-219ENST00000523540 ZMYND10O75800 440 aa10.68□□□□□ -0.7
PCM1-219ENST00000523540 SPRYD7Q5W111 196 aa10.68□□□□□ -0.7
PCM1-219ENST00000523540 TLL1O43897 1013 aa10.67□□□□□ -0.7
PCM1-219ENST00000523540 DNAJB2P25686 324 aa10.67□□□□□ -0.7
PCM1-219ENST00000523540 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
PCM1-219ENST00000523540 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
PCM1-219ENST00000523540 TMEM134Q9H6X4 195 aa10.67□□□□□ -0.7
PCM1-219ENST00000523540 MYT1Q01538 1121 aa10.66□□□□□ -0.7
PCM1-219ENST00000523540 ACTN4O43707 911 aaKnown RBP10.65□□□□□ -0.7
PCM1-219ENST00000523540 DGAT1O75907 488 aa10.65□□□□□ -0.7
PCM1-219ENST00000523540 MAP2K5Q13163 448 aa10.64□□□□□ -0.71
PCM1-219ENST00000523540 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
PCM1-219ENST00000523540 LIAT1Q6ZQX7 453 aa10.63□□□□□ -0.71
PCM1-219ENST00000523540 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
PCM1-219ENST00000523540 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
PCM1-219ENST00000523540 S1PR4O95977 384 aa10.62□□□□□ -0.71
PCM1-219ENST00000523540 RBM46Q8TBY0 533 aaKnown RBP10.62□□□□□ -0.71
PCM1-219ENST00000523540 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
PCM1-219ENST00000523540 GDF9O60383 454 aa10.61□□□□□ -0.71
PCM1-219ENST00000523540 OATP04181 439 aa10.61□□□□□ -0.71
PCM1-219ENST00000523540 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
PCM1-219ENST00000523540 PKDCCQ504Y2 493 aa10.61□□□□□ -0.71
PCM1-219ENST00000523540 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
PCM1-219ENST00000523540 ADH1BP00325 375 aa10.59□□□□□ -0.71
PCM1-219ENST00000523540 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
PCM1-219ENST00000523540 POTECB2RU33 542 aa10.58□□□□□ -0.72
PCM1-219ENST00000523540 CFHP08603 1231 aa10.58□□□□□ -0.72
PCM1-219ENST00000523540 SLC10A3P09131 477 aa10.58□□□□□ -0.72
PCM1-219ENST00000523540 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
PCM1-219ENST00000523540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
PCM1-219ENST00000523540 FECHP22830 423 aa10.56□□□□□ -0.72
PCM1-219ENST00000523540 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
PCM1-219ENST00000523540 PXYLP1Q8TE99 480 aa10.56□□□□□ -0.72
PCM1-219ENST00000523540 IRF6O14896 467 aa10.55□□□□□ -0.72
PCM1-219ENST00000523540 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
PCM1-219ENST00000523540 METTL3Q86U44 580 aaKnown RBP10.54□□□□□ -0.72
PCM1-219ENST00000523540 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
PCM1-219ENST00000523540 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
PCM1-219ENST00000523540 NR1I2O75469 434 aa10.53□□□□□ -0.72
PCM1-219ENST00000523540 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
PCM1-219ENST00000523540 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
PCM1-219ENST00000523540 SLC6A16Q9GZN6 736 aa10.52□□□□□ -0.73
PCM1-219ENST00000523540 AK7Q96M32 723 aa10.5□□□□□ -0.73
PCM1-219ENST00000523540 AAASQ9NRG9 546 aa10.5□□□□□ -0.73
PCM1-219ENST00000523540 SCUBE3Q8IX30 993 aa10.49□□□□□ -0.73
PCM1-219ENST00000523540 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
PCM1-219ENST00000523540 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
PCM1-219ENST00000523540 AMHR2Q16671 573 aa10.48□□□□□ -0.73
PCM1-219ENST00000523540 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
PCM1-219ENST00000523540 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
PCM1-219ENST00000523540 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
PCM1-219ENST00000523540 SPSB2Q99619 263 aa10.45□□□□□ -0.74
PCM1-219ENST00000523540 TRIM66O15016 1216 aa10.44□□□□□ -0.74
PCM1-219ENST00000523540 PUS10Q3MIT2 529 aaKnown RBP10.44□□□□□ -0.74
PCM1-219ENST00000523540 DAXXQ9UER7 740 aaPredicted RBP10.44□□□□□ -0.74
PCM1-219ENST00000523540 AVPP01185 164 aa10.43□□□□□ -0.74
PCM1-219ENST00000523540 RPIAP49247 311 aa10.43□□□□□ -0.74
PCM1-219ENST00000523540 TOR4AQ9NXH8 423 aa10.42□□□□□ -0.74
PCM1-219ENST00000523540 CLCN1P35523 988 aa10.41□□□□□ -0.74
PCM1-219ENST00000523540 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
PCM1-219ENST00000523540 THAP11Q96EK4 314 aa10.41□□□□□ -0.74
PCM1-219ENST00000523540 PHOX2BQ99453 314 aa10.41□□□□□ -0.74
PCM1-219ENST00000523540 FOXC1Q12948 553 aa10.39□□□□□ -0.75
PCM1-219ENST00000523540 MORN1Q5T089 497 aa10.39□□□□□ -0.75
PCM1-219ENST00000523540 GPCPD1Q9NPB8 672 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms