RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
SDC2-207ENST00000522911 UNC13BO14795 1591 aa14.57□□□□□ -0.08
SDC2-207ENST00000522911 HDGFP51858 240 aaKnown RBP14.57□□□□□ -0.08
SDC2-207ENST00000522911 NCOA3Q9Y6Q9 1424 aa14.57□□□□□ -0.08
SDC2-207ENST00000522911 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
SDC2-207ENST00000522911 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
SDC2-207ENST00000522911 SLC26A8Q96RN1 970 aa14.54□□□□□ -0.08
SDC2-207ENST00000522911 TMEM131LA2VDJ0 1609 aa14.54□□□□□ -0.08
SDC2-207ENST00000522911 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
SDC2-207ENST00000522911 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.53□□□□□ -0.08
SDC2-207ENST00000522911 TBX22Q9Y458 520 aa14.53□□□□□ -0.08
SDC2-207ENST00000522911 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
SDC2-207ENST00000522911 PIK3R4Q99570 1358 aa14.52□□□□□ -0.08
SDC2-207ENST00000522911 IQGAP3Q86VI3 1631 aa14.52□□□□□ -0.09
SDC2-207ENST00000522911 DIP2AQ14689 1571 aa14.51□□□□□ -0.09
SDC2-207ENST00000522911 MSH6P52701 1360 aa14.5□□□□□ -0.09
SDC2-207ENST00000522911 CHD2O14647 1828 aaKnown RBP14.5□□□□□ -0.09
SDC2-207ENST00000522911 ROBO1Q9Y6N7 1651 aa14.49□□□□□ -0.09
SDC2-207ENST00000522911 RGS17Q9UGC6 210 aaPredicted RBP14.49□□□□□ -0.09
SDC2-207ENST00000522911 E9PCH4 1651 aa14.49□□□□□ -0.09
SDC2-207ENST00000522911 ADAMTS13Q76LX8 1427 aa14.48□□□□□ -0.09
SDC2-207ENST00000522911 SLAIN2Q9P270 581 aa14.47□□□□□ -0.09
SDC2-207ENST00000522911 PPP1R15AO75807 674 aaPredicted RBP14.45□□□□□ -0.1
SDC2-207ENST00000522911 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
SDC2-207ENST00000522911 NUP155O75694 1391 aa14.44□□□□□ -0.1
SDC2-207ENST00000522911 JCADQ9P266 1359 aa14.43□□□□□ -0.1
SDC2-207ENST00000522911 DCCP43146 1447 aa14.42□□□□□ -0.1
SDC2-207ENST00000522911 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
SDC2-207ENST00000522911 BCANQ96GW7 911 aa14.42□□□□□ -0.1
SDC2-207ENST00000522911 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
SDC2-207ENST00000522911 TRPM2O94759 1503 aa14.41□□□□□ -0.1
SDC2-207ENST00000522911 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
SDC2-207ENST00000522911 SETBP1Q9Y6X0 1596 aa14.41□□□□□ -0.1
SDC2-207ENST00000522911 COL16A1Q07092 1604 aaPredicted RBP14.4□□□□□ -0.1
SDC2-207ENST00000522911 AHDC1Q5TGY3 1603 aaPredicted RBP14.4□□□□□ -0.1
SDC2-207ENST00000522911 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
SDC2-207ENST00000522911 POTEAQ6S8J7 498 aa14.38□□□□□ -0.11
SDC2-207ENST00000522911 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
SDC2-207ENST00000522911 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
SDC2-207ENST00000522911 PTPRUQ92729 1446 aa14.37□□□□□ -0.11
SDC2-207ENST00000522911 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
SDC2-207ENST00000522911 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.37□□□□□ -0.11
SDC2-207ENST00000522911 NRXN3Q9Y4C0 1643 aa14.37□□□□□ -0.11
SDC2-207ENST00000522911 SPHKAPQ2M3C7 1700 aa14.36□□□□□ -0.11
SDC2-207ENST00000522911 XRN1Q8IZH2 1706 aaKnown RBP14.36□□□□□ -0.11
SDC2-207ENST00000522911 AMOTL2Q9Y2J4 779 aa14.36□□□□□ -0.11
SDC2-207ENST00000522911 ATF3P18847 181 aa14.35□□□□□ -0.11
SDC2-207ENST00000522911 PRAG1Q86YV5 1406 aa14.33□□□□□ -0.11
SDC2-207ENST00000522911 SHPRHQ149N8 1683 aa14.33□□□□□ -0.11
SDC2-207ENST00000522911 NAIPQ13075 1403 aa14.32□□□□□ -0.12
SDC2-207ENST00000522911 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
SDC2-207ENST00000522911 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
SDC2-207ENST00000522911 NUTM2DQ5VT03 806 aaPredicted RBP14.31□□□□□ -0.12
SDC2-207ENST00000522911 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
SDC2-207ENST00000522911 C14orf37Q86TY3 774 aa14.31□□□□□ -0.12
SDC2-207ENST00000522911 LRP6O75581 1613 aa14.3□□□□□ -0.12
SDC2-207ENST00000522911 METP08581 1390 aa14.3□□□□□ -0.12
SDC2-207ENST00000522911 MST1RQ04912 1400 aa14.3□□□□□ -0.12
SDC2-207ENST00000522911 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
SDC2-207ENST00000522911 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
SDC2-207ENST00000522911 HFM1A2PYH4 1435 aa14.29□□□□□ -0.12
SDC2-207ENST00000522911 ASXL1Q8IXJ9 1541 aa14.29□□□□□ -0.12
SDC2-207ENST00000522911 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
SDC2-207ENST00000522911 ITGAEP38570 1179 aa14.28□□□□□ -0.12
SDC2-207ENST00000522911 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
SDC2-207ENST00000522911 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.12
SDC2-207ENST00000522911 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
SDC2-207ENST00000522911 CDK12Q9NYV4 1490 aaPredicted RBP14.26□□□□□ -0.13
SDC2-207ENST00000522911 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
SDC2-207ENST00000522911 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
SDC2-207ENST00000522911 LAMC1P11047 1609 aa14.25□□□□□ -0.13
SDC2-207ENST00000522911 LRRC59Q96AG4 307 aaKnown RBP14.24□□□□□ -0.13
SDC2-207ENST00000522911 KIF1BO60333 1816 aa14.23□□□□□ -0.13
SDC2-207ENST00000522911 SETD1AO15047 1707 aaKnown RBP14.23□□□□□ -0.13
SDC2-207ENST00000522911 NALCNQ8IZF0 1738 aa14.21□□□□□ -0.13
SDC2-207ENST00000522911 C1orf167Q5SNV9 1468 aa14.21□□□□□ -0.13
SDC2-207ENST00000522911 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.13
SDC2-207ENST00000522911 PNPLA6Q8IY17 1366 aa14.2□□□□□ -0.14
SDC2-207ENST00000522911 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
SDC2-207ENST00000522911 RXRBP28702 533 aa14.18□□□□□ -0.14
SDC2-207ENST00000522911 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
SDC2-207ENST00000522911 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
SDC2-207ENST00000522911 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
SDC2-207ENST00000522911 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
SDC2-207ENST00000522911 TECPR2O15040 1411 aa14.16□□□□□ -0.14
SDC2-207ENST00000522911 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
SDC2-207ENST00000522911 PPLO60437 1756 aa14.16□□□□□ -0.14
SDC2-207ENST00000522911 AFF2P51816 1311 aa14.15□□□□□ -0.14
SDC2-207ENST00000522911 CDC42BPGQ6DT37 1551 aa14.14□□□□□ -0.15
SDC2-207ENST00000522911 ANKRD30BQ9BXX2 1392 aa14.14□□□□□ -0.15
SDC2-207ENST00000522911 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
SDC2-207ENST00000522911 SPATA31E1Q6ZUB1 1445 aa14.14□□□□□ -0.15
SDC2-207ENST00000522911 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
SDC2-207ENST00000522911 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
SDC2-207ENST00000522911 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
SDC2-207ENST00000522911 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
SDC2-207ENST00000522911 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
SDC2-207ENST00000522911 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
SDC2-207ENST00000522911 FNBP4Q8N3X1 1017 aaPredicted RBP14.11□□□□□ -0.15
SDC2-207ENST00000522911 DDX17Q92841 729 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms