RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
SKP1-210ENST00000522855 NECTIN2Q92692 538 aa9.25□□□□□ -0.93
SKP1-210ENST00000522855 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
SKP1-210ENST00000522855 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
SKP1-210ENST00000522855 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
SKP1-210ENST00000522855 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
SKP1-210ENST00000522855 HIC1Q14526 733 aa9.23□□□□□ -0.93
SKP1-210ENST00000522855 PXYLP1Q8TE99 480 aa9.22□□□□□ -0.93
SKP1-210ENST00000522855 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
SKP1-210ENST00000522855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
SKP1-210ENST00000522855 ZMYND10O75800 440 aa9.2□□□□□ -0.94
SKP1-210ENST00000522855 FECHP22830 423 aa9.2□□□□□ -0.94
SKP1-210ENST00000522855 METTL3Q86U44 580 aaKnown RBP9.19□□□□□ -0.94
SKP1-210ENST00000522855 GNPATO15228 680 aa9.18□□□□□ -0.94
SKP1-210ENST00000522855 SLC10A3P09131 477 aa9.18□□□□□ -0.94
SKP1-210ENST00000522855 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
SKP1-210ENST00000522855 OATP04181 439 aa9.16□□□□□ -0.94
SKP1-210ENST00000522855 PPP1R18Q6NYC8 613 aa9.16□□□□□ -0.94
SKP1-210ENST00000522855 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
SKP1-210ENST00000522855 PRR14Q9BWN1 585 aa9.16□□□□□ -0.94
SKP1-210ENST00000522855 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
SKP1-210ENST00000522855 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
SKP1-210ENST00000522855 ACTN4O43707 911 aaKnown RBP9.15□□□□□ -0.94
SKP1-210ENST00000522855 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
SKP1-210ENST00000522855 COPS2P61201 443 aa9.15□□□□□ -0.94
SKP1-210ENST00000522855 ZPR1O75312 459 aa9.14□□□□□ -0.95
SKP1-210ENST00000522855 CFHP08603 1231 aa9.14□□□□□ -0.95
SKP1-210ENST00000522855 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
SKP1-210ENST00000522855 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
SKP1-210ENST00000522855 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
SKP1-210ENST00000522855 AK7Q96M32 723 aa9.11□□□□□ -0.95
SKP1-210ENST00000522855 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
SKP1-210ENST00000522855 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
SKP1-210ENST00000522855 TLL1O43897 1013 aa9.1□□□□□ -0.95
SKP1-210ENST00000522855 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
SKP1-210ENST00000522855 NEUROD2Q15784 382 aa9.1□□□□□ -0.95
SKP1-210ENST00000522855 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SKP1-210ENST00000522855 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
SKP1-210ENST00000522855 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
SKP1-210ENST00000522855 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
SKP1-210ENST00000522855 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
SKP1-210ENST00000522855 TMUB1Q9BVT8 246 aa9.07□□□□□ -0.96
SKP1-210ENST00000522855 DAXXQ9UER7 740 aaPredicted RBP9.07□□□□□ -0.96
SKP1-210ENST00000522855 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
SKP1-210ENST00000522855 MAP2K5Q13163 448 aa9.05□□□□□ -0.96
SKP1-210ENST00000522855 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
SKP1-210ENST00000522855 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
SKP1-210ENST00000522855 LCE2BO14633 110 aa9.04□□□□□ -0.96
SKP1-210ENST00000522855 GGCXP38435 758 aa9.03□□□□□ -0.96
SKP1-210ENST00000522855 ADH1BP00325 375 aa9.02□□□□□ -0.97
SKP1-210ENST00000522855 NR1I2O75469 434 aa9.01□□□□□ -0.97
SKP1-210ENST00000522855 S1PR4O95977 384 aa9.01□□□□□ -0.97
SKP1-210ENST00000522855 TRIM66O15016 1216 aa9□□□□□ -0.97
SKP1-210ENST00000522855 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
SKP1-210ENST00000522855 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 GCGRP47871 477 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 LAPTM4AQ15012 233 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 MORN1Q5T089 497 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
SKP1-210ENST00000522855 IRF6O14896 467 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 PDE4DQ08499 809 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 FUT2Q10981 343 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 RDH13Q8NBN7 331 aa8.98□□□□□ -0.97
SKP1-210ENST00000522855 NRG2O14511 850 aaPredicted RBP8.97□□□□□ -0.97
SKP1-210ENST00000522855 TRIM67Q6ZTA4 783 aa8.97□□□□□ -0.97
SKP1-210ENST00000522855 PPEF1O14829 653 aaPredicted RBP8.96□□□□□ -0.98
SKP1-210ENST00000522855 GFRA3O60609 400 aa8.96□□□□□ -0.98
SKP1-210ENST00000522855 CD46P15529 392 aa8.96□□□□□ -0.98
SKP1-210ENST00000522855 PLA2G2CQ5R387 149 aa8.96□□□□□ -0.98
SKP1-210ENST00000522855 Q6ZNB5 142 aa8.96□□□□□ -0.98
SKP1-210ENST00000522855 SLC6A16Q9GZN6 736 aa8.95□□□□□ -0.98
SKP1-210ENST00000522855 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
SKP1-210ENST00000522855 AMHR2Q16671 573 aa8.94□□□□□ -0.98
SKP1-210ENST00000522855 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
SKP1-210ENST00000522855 KDM4CQ9H3R0 1056 aa8.94□□□□□ -0.98
SKP1-210ENST00000522855 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
SKP1-210ENST00000522855 SLC19A1P41440 591 aa8.93□□□□□ -0.98
SKP1-210ENST00000522855 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
SKP1-210ENST00000522855 SPSB2Q99619 263 aa8.93□□□□□ -0.98
SKP1-210ENST00000522855 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
SKP1-210ENST00000522855 SLC27A5Q9Y2P5 690 aa8.93□□□□□ -0.98
SKP1-210ENST00000522855 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
SKP1-210ENST00000522855 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
SKP1-210ENST00000522855 FAM160A2Q8N612 972 aaPredicted RBP8.91□□□□□ -0.98
SKP1-210ENST00000522855 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
SKP1-210ENST00000522855 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
SKP1-210ENST00000522855 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
SKP1-210ENST00000522855 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
SKP1-210ENST00000522855 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
SKP1-210ENST00000522855 ZNF598Q86UK7 904 aaKnown RBP8.89□□□□□ -0.99
SKP1-210ENST00000522855 PRDM9Q9NQV7 894 aa8.89□□□□□ -0.99
SKP1-210ENST00000522855 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
SKP1-210ENST00000522855 PRR20EP86478 221 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 PRR20CP86479 221 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 PRR20DP86480 221 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms