RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 CPS1P31327 1500 aa24.44■■□□□ 1.5
PABPC1-221ENST00000522720 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.43■■□□□ 1.5
PABPC1-221ENST00000522720 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
PABPC1-221ENST00000522720 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
PABPC1-221ENST00000522720 PPP1R15AO75807 674 aaPredicted RBP24.4■■□□□ 1.5
PABPC1-221ENST00000522720 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.49
PABPC1-221ENST00000522720 RAB3GAP2Q9H2M9 1393 aa24.39■■□□□ 1.49
PABPC1-221ENST00000522720 PLEKHG1Q9ULL1 1385 aa24.39■■□□□ 1.49
PABPC1-221ENST00000522720 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.49
PABPC1-221ENST00000522720 FOXD1Q16676 465 aa24.37■■□□□ 1.49
PABPC1-221ENST00000522720 BCANQ96GW7 911 aa24.37■■□□□ 1.49
PABPC1-221ENST00000522720 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
PABPC1-221ENST00000522720 KIF1BO60333 1816 aa24.35■■□□□ 1.49
PABPC1-221ENST00000522720 ZNF326Q5BKZ1 582 aaKnown RBP24.34■■□□□ 1.49
PABPC1-221ENST00000522720 KCNA6P17658 529 aa24.32■■□□□ 1.48
PABPC1-221ENST00000522720 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
PABPC1-221ENST00000522720 LRRC7Q96NW7 1537 aa24.31■■□□□ 1.48
PABPC1-221ENST00000522720 HRCP23327 699 aa24.31■■□□□ 1.48
PABPC1-221ENST00000522720 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
PABPC1-221ENST00000522720 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
PABPC1-221ENST00000522720 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
PABPC1-221ENST00000522720 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
PABPC1-221ENST00000522720 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
PABPC1-221ENST00000522720 TOM1O60784 492 aa24.24■■□□□ 1.47
PABPC1-221ENST00000522720 CHD2O14647 1828 aaKnown RBP24.24■■□□□ 1.47
PABPC1-221ENST00000522720 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
PABPC1-221ENST00000522720 DIP2AQ14689 1571 aa24.23■■□□□ 1.47
PABPC1-221ENST00000522720 NWD1Q149M9 1564 aa24.22■■□□□ 1.47
PABPC1-221ENST00000522720 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
PABPC1-221ENST00000522720 XIRP1Q702N8 1843 aaKnown RBP24.21■■□□□ 1.47
PABPC1-221ENST00000522720 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.47
PABPC1-221ENST00000522720 VGFO15240 615 aaPredicted RBP24.2■■□□□ 1.46
PABPC1-221ENST00000522720 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
PABPC1-221ENST00000522720 NKTRP30414 1462 aaKnown RBP24.19■■□□□ 1.46
PABPC1-221ENST00000522720 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
PABPC1-221ENST00000522720 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
PABPC1-221ENST00000522720 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
PABPC1-221ENST00000522720 PPLO60437 1756 aa24.16■■□□□ 1.46
PABPC1-221ENST00000522720 ALKQ9UM73 1620 aa24.15■■□□□ 1.46
PABPC1-221ENST00000522720 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
PABPC1-221ENST00000522720 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
PABPC1-221ENST00000522720 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
PABPC1-221ENST00000522720 AMOTL2Q9Y2J4 779 aa24.13■■□□□ 1.45
PABPC1-221ENST00000522720 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
PABPC1-221ENST00000522720 PTPRUQ92729 1446 aa24.12■■□□□ 1.45
PABPC1-221ENST00000522720 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
PABPC1-221ENST00000522720 METP08581 1390 aa24.11■■□□□ 1.45
PABPC1-221ENST00000522720 NCOA3Q9Y6Q9 1424 aa24.08■■□□□ 1.44
PABPC1-221ENST00000522720 ADGRF5Q8IZF2 1346 aa24.07■■□□□ 1.44
PABPC1-221ENST00000522720 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
PABPC1-221ENST00000522720 MSH6P52701 1360 aa24.05■■□□□ 1.44
PABPC1-221ENST00000522720 XRN1Q8IZH2 1706 aaKnown RBP24.05■■□□□ 1.44
PABPC1-221ENST00000522720 SETD1AO15047 1707 aaKnown RBP24.04■■□□□ 1.44
PABPC1-221ENST00000522720 C14orf37Q86TY3 774 aa24.01■■□□□ 1.43
PABPC1-221ENST00000522720 HSPA1LP34931 641 aa24■■□□□ 1.43
PABPC1-221ENST00000522720 C19orf44Q9H6X5 657 aa24■■□□□ 1.43
PABPC1-221ENST00000522720 FAM135BQ49AJ0 1406 aa23.98■■□□□ 1.43
PABPC1-221ENST00000522720 PIK3C2GO75747 1445 aa23.97■■□□□ 1.43
PABPC1-221ENST00000522720 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
PABPC1-221ENST00000522720 SLAIN2Q9P270 581 aa23.96■■□□□ 1.43
PABPC1-221ENST00000522720 MYOM2P54296 1465 aa23.95■■□□□ 1.42
PABPC1-221ENST00000522720 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
PABPC1-221ENST00000522720 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
PABPC1-221ENST00000522720 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
PABPC1-221ENST00000522720 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
PABPC1-221ENST00000522720 ATF3P18847 181 aa23.93■■□□□ 1.42
PABPC1-221ENST00000522720 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
PABPC1-221ENST00000522720 C14orf93Q9H972 538 aaKnown RBP23.92■■□□□ 1.42
PABPC1-221ENST00000522720 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
PABPC1-221ENST00000522720 STAC3Q96MF2 364 aa23.91■■□□□ 1.42
PABPC1-221ENST00000522720 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
PABPC1-221ENST00000522720 TMEM132EQ6IEE7 984 aa23.89■■□□□ 1.41
PABPC1-221ENST00000522720 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
PABPC1-221ENST00000522720 DCCP43146 1447 aa23.89■■□□□ 1.41
PABPC1-221ENST00000522720 LRPPRCP42704 1394 aaKnown RBP23.88■■□□□ 1.41
PABPC1-221ENST00000522720 ADGRL3Q9HAR2 1447 aa23.87■■□□□ 1.41
PABPC1-221ENST00000522720 CFAP70Q5T0N1 1121 aa23.87■■□□□ 1.41
PABPC1-221ENST00000522720 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
PABPC1-221ENST00000522720 ASXL1Q8IXJ9 1541 aa23.87■■□□□ 1.41
PABPC1-221ENST00000522720 STK26Q9P289 416 aa23.86■■□□□ 1.41
PABPC1-221ENST00000522720 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
PABPC1-221ENST00000522720 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
PABPC1-221ENST00000522720 TECPR2O15040 1411 aa23.84■■□□□ 1.41
PABPC1-221ENST00000522720 LAMC1P11047 1609 aa23.84■■□□□ 1.41
PABPC1-221ENST00000522720 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
PABPC1-221ENST00000522720 YTHDC2Q9H6S0 1430 aaKnown RBP23.83■■□□□ 1.4
PABPC1-221ENST00000522720 MST1RQ04912 1400 aa23.8■■□□□ 1.4
PABPC1-221ENST00000522720 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
PABPC1-221ENST00000522720 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
PABPC1-221ENST00000522720 WAPLQ7Z5K2 1190 aa23.79■■□□□ 1.4
PABPC1-221ENST00000522720 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
PABPC1-221ENST00000522720 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
PABPC1-221ENST00000522720 DISP3Q9P2K9 1392 aa23.75■■□□□ 1.39
PABPC1-221ENST00000522720 ADGRB1O14514 1584 aa23.74■■□□□ 1.39
PABPC1-221ENST00000522720 PHLPP1O60346 1717 aa23.74■■□□□ 1.39
PABPC1-221ENST00000522720 PLEKHH1Q9ULM0 1364 aa23.74■■□□□ 1.39
PABPC1-221ENST00000522720 C1orf167Q5SNV9 1468 aa23.72■■□□□ 1.39
PABPC1-221ENST00000522720 AHDC1Q5TGY3 1603 aaPredicted RBP23.71■■□□□ 1.39
PABPC1-221ENST00000522720 CDC42BPGQ6DT37 1551 aa23.7■■□□□ 1.38
PABPC1-221ENST00000522720 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms