RNA–Protein interactions for RNA: ENST00000522234.5

CDK16-217, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-217ENST00000522234 ERVK-7P63135 1459 aa28.78■■■□□ 2.2
CDK16-217ENST00000522234 TRHP20396 242 aaPredicted RBP28.75■■■□□ 2.19
CDK16-217ENST00000522234 ADGRF5Q8IZF2 1346 aa28.75■■■□□ 2.19
CDK16-217ENST00000522234 CENPBP07199 599 aaPredicted RBP28.74■■■□□ 2.19
CDK16-217ENST00000522234 YTHDC1Q96MU7 727 aaKnown RBP28.74■■■□□ 2.19
CDK16-217ENST00000522234 SCAF11Q99590 1463 aaKnown RBP28.73■■■□□ 2.19
CDK16-217ENST00000522234 CCER2I3L3R5 266 aa28.73■■■□□ 2.19
CDK16-217ENST00000522234 IDI1Q13907 227 aa28.71■■■□□ 2.19
CDK16-217ENST00000522234 MLECQ14165 292 aa28.71■■■□□ 2.19
CDK16-217ENST00000522234 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
CDK16-217ENST00000522234 SPATA31D1Q6ZQQ2 1576 aa28.7■■■□□ 2.19
CDK16-217ENST00000522234 NEXMIFQ5QGS0 1516 aa28.7■■■□□ 2.18
CDK16-217ENST00000522234 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
CDK16-217ENST00000522234 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
CDK16-217ENST00000522234 FBXO31Q5XUX0 539 aaPredicted RBP28.67■■■□□ 2.18
CDK16-217ENST00000522234 SETBP1Q9Y6X0 1596 aa28.67■■■□□ 2.18
CDK16-217ENST00000522234 TESK2Q96S53 571 aa28.67■■■□□ 2.18
CDK16-217ENST00000522234 POLR3GLQ9BT43 218 aa28.67■■■□□ 2.18
CDK16-217ENST00000522234 CFAP70Q5T0N1 1121 aa28.66■■■□□ 2.18
CDK16-217ENST00000522234 EIF3AQ14152 1382 aaKnown RBP28.66■■■□□ 2.18
CDK16-217ENST00000522234 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
CDK16-217ENST00000522234 MYO5BQ9ULV0 1848 aa28.63■■■□□ 2.17
CDK16-217ENST00000522234 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
CDK16-217ENST00000522234 VGFO15240 615 aaPredicted RBP28.61■■■□□ 2.17
CDK16-217ENST00000522234 TMF1P82094 1093 aa28.6■■■□□ 2.17
CDK16-217ENST00000522234 ZMYM3Q14202 1370 aa28.59■■■□□ 2.17
CDK16-217ENST00000522234 C14orf93Q9H972 538 aaKnown RBP28.59■■■□□ 2.17
CDK16-217ENST00000522234 DISP3Q9P2K9 1392 aa28.59■■■□□ 2.17
CDK16-217ENST00000522234 ADGRB1O14514 1584 aa28.55■■■□□ 2.16
CDK16-217ENST00000522234 PRKRIP1Q9H875 184 aaPredicted RBP28.55■■■□□ 2.16
CDK16-217ENST00000522234 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
CDK16-217ENST00000522234 SLC24A1O60721 1099 aa28.51■■■□□ 2.15
CDK16-217ENST00000522234 STAG3Q9UJ98 1225 aa28.51■■■□□ 2.15
CDK16-217ENST00000522234 A2ML1A8K2U0 1454 aa28.5■■■□□ 2.15
CDK16-217ENST00000522234 CDCA8Q53HL2 280 aa28.48■■■□□ 2.15
CDK16-217ENST00000522234 NUTM2DQ5VT03 806 aaPredicted RBP28.47■■■□□ 2.15
CDK16-217ENST00000522234 TNRQ92752 1358 aa28.46■■■□□ 2.15
CDK16-217ENST00000522234 SBNO2Q9Y2G9 1366 aa28.45■■■□□ 2.15
CDK16-217ENST00000522234 KDM5AP29375 1690 aaKnown RBP28.43■■■□□ 2.14
CDK16-217ENST00000522234 FER1L4A9Z1Z3 1794 aa28.42■■■□□ 2.14
CDK16-217ENST00000522234 CENPJQ9HC77 1338 aaPredicted RBP28.41■■■□□ 2.14
CDK16-217ENST00000522234 RIMS2Q9UQ26 1411 aa28.4■■■□□ 2.14
CDK16-217ENST00000522234 TMEM132EQ6IEE7 984 aa28.4■■■□□ 2.14
CDK16-217ENST00000522234 KTN1Q86UP2 1357 aaKnown RBP28.39■■■□□ 2.14
CDK16-217ENST00000522234 QRICH2Q9H0J4 1663 aa28.38■■■□□ 2.13
CDK16-217ENST00000522234 ASXL1Q8IXJ9 1541 aa28.38■■■□□ 2.13
CDK16-217ENST00000522234 TRAK1Q9UPV9 953 aa28.38■■■□□ 2.13
CDK16-217ENST00000522234 ARHGEF28Q8N1W1 1705 aaKnown RBP28.37■■■□□ 2.13
CDK16-217ENST00000522234 C3P01024 1663 aa28.36■■■□□ 2.13
CDK16-217ENST00000522234 ALKQ9UM73 1620 aa28.35■■■□□ 2.13
CDK16-217ENST00000522234 NLRP1Q9C000 1473 aa28.34■■■□□ 2.13
CDK16-217ENST00000522234 UBR1Q8IWV7 1749 aa28.33■■■□□ 2.13
CDK16-217ENST00000522234 MYOM1P52179 1685 aa28.33■■■□□ 2.13
CDK16-217ENST00000522234 PER1O15534 1290 aaPredicted RBP28.32■■■□□ 2.12
CDK16-217ENST00000522234 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.32■■■□□ 2.12
CDK16-217ENST00000522234 PANK3Q9H999 370 aa28.32■■■□□ 2.12
CDK16-217ENST00000522234 RALBP1Q15311 655 aa28.3■■■□□ 2.12
CDK16-217ENST00000522234 MRS2Q9HD23 443 aa28.29■■■□□ 2.12
CDK16-217ENST00000522234 CCDC184Q52MB2 194 aa28.28■■■□□ 2.12
CDK16-217ENST00000522234 YTHDC2Q9H6S0 1430 aaKnown RBP28.27■■■□□ 2.12
CDK16-217ENST00000522234 HDGFP51858 240 aaKnown RBP28.27■■■□□ 2.12
CDK16-217ENST00000522234 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.11
CDK16-217ENST00000522234 CEBPAP49715 358 aaPredicted RBP28.25■■■□□ 2.11
CDK16-217ENST00000522234 CNGB1Q14028 1251 aaPredicted RBP28.25■■■□□ 2.11
CDK16-217ENST00000522234 PARD3Q8TEW0 1356 aa28.25■■■□□ 2.11
CDK16-217ENST00000522234 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
CDK16-217ENST00000522234 NRXN3Q9Y4C0 1643 aa28.23■■■□□ 2.11
CDK16-217ENST00000522234 PTPRMP28827 1452 aa28.23■■■□□ 2.11
CDK16-217ENST00000522234 MYBBP1AQ9BQG0 1328 aaKnown RBP28.22■■■□□ 2.11
CDK16-217ENST00000522234 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
CDK16-217ENST00000522234 STK26Q9P289 416 aa28.2■■■□□ 2.11
CDK16-217ENST00000522234 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
CDK16-217ENST00000522234 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
CDK16-217ENST00000522234 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
CDK16-217ENST00000522234 KNSTRNQ9Y448 316 aa28.17■■■□□ 2.1
CDK16-217ENST00000522234 EVC2Q86UK5 1308 aa28.17■■■□□ 2.1
CDK16-217ENST00000522234 BRD4O60885 1362 aaPredicted RBP28.17■■■□□ 2.1
CDK16-217ENST00000522234 LRPPRCP42704 1394 aaKnown RBP28.16■■■□□ 2.1
CDK16-217ENST00000522234 RIMS1Q86UR5 1692 aaKnown RBP28.15■■■□□ 2.1
CDK16-217ENST00000522234 NPC1L1Q9UHC9 1359 aa28.13■■■□□ 2.09
CDK16-217ENST00000522234 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
CDK16-217ENST00000522234 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
CDK16-217ENST00000522234 ADAMTSL3P82987 1691 aa28.12■■■□□ 2.09
CDK16-217ENST00000522234 SLIT1O75093 1534 aa28.12■■■□□ 2.09
CDK16-217ENST00000522234 FAM9BQ8IZU0 186 aa28.12■■■□□ 2.09
CDK16-217ENST00000522234 TMC1Q8TDI8 760 aa28.12■■■□□ 2.09
CDK16-217ENST00000522234 PRAM1Q96QH2 718 aa28.12■■■□□ 2.09
CDK16-217ENST00000522234 NLRP13Q86W25 1043 aa28.11■■■□□ 2.09
CDK16-217ENST00000522234 POGKQ9P215 609 aa28.11■■■□□ 2.09
CDK16-217ENST00000522234 ARHGAP23Q9P227 1491 aa28.11■■■□□ 2.09
CDK16-217ENST00000522234 ABCC11Q96J66 1382 aa28.11■■■□□ 2.09
CDK16-217ENST00000522234 AMER1Q5JTC6 1135 aaPredicted RBP28.1■■■□□ 2.09
CDK16-217ENST00000522234 PLEKHG1Q9ULL1 1385 aa28.1■■■□□ 2.09
CDK16-217ENST00000522234 HNRNPUQ00839 825 aaKnown RBP eCLIP28.1■■■□□ 2.09
CDK16-217ENST00000522234 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
CDK16-217ENST00000522234 KNDC1Q76NI1 1749 aa28.09■■■□□ 2.09
CDK16-217ENST00000522234 SAFB2Q14151 953 aaKnown RBP eCLIP28.07■■■□□ 2.08
CDK16-217ENST00000522234 METP08581 1390 aa28.06■■■□□ 2.08
CDK16-217ENST00000522234 GTF3C3Q9Y5Q9 886 aa28.05■■■□□ 2.08
CDK16-217ENST00000522234 EID1Q9Y6B2 187 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms