RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 NEXMIFQ5QGS0 1516 aa30.31■■■□□ 2.44
R3HCC1-208ENST00000522012 RALGAPBQ86X10 1494 aa30.29■■■□□ 2.44
R3HCC1-208ENST00000522012 RIMS2Q9UQ26 1411 aa30.28■■■□□ 2.44
R3HCC1-208ENST00000522012 ROCK2O75116 1388 aaKnown RBP30.27■■■□□ 2.44
R3HCC1-208ENST00000522012 IFT172Q9UG01 1749 aa30.27■■■□□ 2.44
R3HCC1-208ENST00000522012 MYO5BQ9ULV0 1848 aa30.26■■■□□ 2.44
R3HCC1-208ENST00000522012 PPLO60437 1756 aa30.26■■■□□ 2.43
R3HCC1-208ENST00000522012 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.43
R3HCC1-208ENST00000522012 HDGFP51858 240 aaKnown RBP30.26■■■□□ 2.43
R3HCC1-208ENST00000522012 NBPF1Q3BBV0 1214 aa30.26■■■□□ 2.43
R3HCC1-208ENST00000522012 CARD11Q9BXL7 1154 aa30.26■■■□□ 2.43
R3HCC1-208ENST00000522012 MYO3AQ8NEV4 1616 aa30.25■■■□□ 2.43
R3HCC1-208ENST00000522012 THEMISQ8N1K5 641 aaPredicted RBP30.25■■■□□ 2.43
R3HCC1-208ENST00000522012 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.25■■■□□ 2.43
R3HCC1-208ENST00000522012 ZFYVE9O95405 1425 aa30.24■■■□□ 2.43
R3HCC1-208ENST00000522012 TMEM2Q9UHN6 1383 aa30.24■■■□□ 2.43
R3HCC1-208ENST00000522012 ZNF316A6NFI3 1004 aaPredicted RBP30.23■■■□□ 2.43
R3HCC1-208ENST00000522012 CFAP70Q5T0N1 1121 aa30.23■■■□□ 2.43
R3HCC1-208ENST00000522012 UBR1Q8IWV7 1749 aa30.23■■■□□ 2.43
R3HCC1-208ENST00000522012 KDM5AP29375 1690 aaKnown RBP30.22■■■□□ 2.43
R3HCC1-208ENST00000522012 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
R3HCC1-208ENST00000522012 TRPM1Q7Z4N2 1603 aa30.21■■■□□ 2.43
R3HCC1-208ENST00000522012 EIF4G2P78344 907 aaKnown RBP eCLIP30.21■■■□□ 2.43
R3HCC1-208ENST00000522012 PIK3C2GO75747 1445 aa30.21■■■□□ 2.43
R3HCC1-208ENST00000522012 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
R3HCC1-208ENST00000522012 HIRIP3Q9BW71 556 aaPredicted RBP30.18■■■□□ 2.42
R3HCC1-208ENST00000522012 C14orf93Q9H972 538 aaKnown RBP30.18■■■□□ 2.42
R3HCC1-208ENST00000522012 HSPA5P11021 654 aaKnown RBP30.17■■■□□ 2.42
R3HCC1-208ENST00000522012 LMTK3Q96Q04 1460 aa30.17■■■□□ 2.42
R3HCC1-208ENST00000522012 GPRASP1Q5JY77 1395 aa30.16■■■□□ 2.42
R3HCC1-208ENST00000522012 TXNDC2Q86VQ3 553 aa30.16■■■□□ 2.42
R3HCC1-208ENST00000522012 EID1Q9Y6B2 187 aa30.16■■■□□ 2.42
R3HCC1-208ENST00000522012 USP47Q96K76 1375 aa30.13■■■□□ 2.41
R3HCC1-208ENST00000522012 LTKP29376 864 aa30.12■■■□□ 2.41
R3HCC1-208ENST00000522012 BCANQ96GW7 911 aa30.12■■■□□ 2.41
R3HCC1-208ENST00000522012 ARHGAP23Q9P227 1491 aa30.11■■■□□ 2.41
R3HCC1-208ENST00000522012 SLIT1O75093 1534 aa30.11■■■□□ 2.41
R3HCC1-208ENST00000522012 FBXO41Q8TF61 875 aa30.09■■■□□ 2.41
R3HCC1-208ENST00000522012 SETD1BQ9UPS6 1966 aaKnown RBP30.09■■■□□ 2.41
R3HCC1-208ENST00000522012 ZNF142P52746 1687 aaPredicted RBP30.08■■■□□ 2.41
R3HCC1-208ENST00000522012 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
R3HCC1-208ENST00000522012 TMEM132EQ6IEE7 984 aa30.07■■■□□ 2.4
R3HCC1-208ENST00000522012 PLEKHG1Q9ULL1 1385 aa30.03■■■□□ 2.4
R3HCC1-208ENST00000522012 ANKLE2Q86XL3 938 aa30.03■■■□□ 2.4
R3HCC1-208ENST00000522012 LAMC1P11047 1609 aa30.03■■■□□ 2.4
R3HCC1-208ENST00000522012 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.4
R3HCC1-208ENST00000522012 SCAF11Q99590 1463 aaKnown RBP30.01■■■□□ 2.4
R3HCC1-208ENST00000522012 SETBP1Q9Y6X0 1596 aa30.01■■■□□ 2.39
R3HCC1-208ENST00000522012 ALKQ9UM73 1620 aa30.01■■■□□ 2.39
R3HCC1-208ENST00000522012 HSPA2P54652 639 aa29.99■■■□□ 2.39
R3HCC1-208ENST00000522012 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
R3HCC1-208ENST00000522012 TRAK1Q9UPV9 953 aa29.97■■■□□ 2.39
R3HCC1-208ENST00000522012 STK26Q9P289 416 aa29.96■■■□□ 2.39
R3HCC1-208ENST00000522012 EIF3AQ14152 1382 aaKnown RBP29.95■■■□□ 2.38
R3HCC1-208ENST00000522012 SLC26A8Q96RN1 970 aa29.94■■■□□ 2.38
R3HCC1-208ENST00000522012 NRXN3Q9Y4C0 1643 aa29.93■■■□□ 2.38
R3HCC1-208ENST00000522012 ADAMTS13Q76LX8 1427 aa29.92■■■□□ 2.38
R3HCC1-208ENST00000522012 ASXL1Q8IXJ9 1541 aa29.92■■■□□ 2.38
R3HCC1-208ENST00000522012 METP08581 1390 aa29.91■■■□□ 2.38
R3HCC1-208ENST00000522012 IQGAP1P46940 1657 aa29.9■■■□□ 2.38
R3HCC1-208ENST00000522012 NCKAP5LQ9HCH0 1330 aa29.9■■■□□ 2.38
R3HCC1-208ENST00000522012 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.38
R3HCC1-208ENST00000522012 TBX22Q9Y458 520 aa29.88■■■□□ 2.37
R3HCC1-208ENST00000522012 C11orf95C9JLR9 678 aaPredicted RBP29.86■■■□□ 2.37
R3HCC1-208ENST00000522012 LRPPRCP42704 1394 aaKnown RBP29.86■■■□□ 2.37
R3HCC1-208ENST00000522012 MED14O60244 1454 aa29.85■■■□□ 2.37
R3HCC1-208ENST00000522012 TESK2Q96S53 571 aa29.85■■■□□ 2.37
R3HCC1-208ENST00000522012 CENPJQ9HC77 1338 aaPredicted RBP29.84■■■□□ 2.37
R3HCC1-208ENST00000522012 NPHP4O75161 1426 aaPredicted RBP29.83■■■□□ 2.37
R3HCC1-208ENST00000522012 SETD1AO15047 1707 aaKnown RBP29.83■■■□□ 2.37
R3HCC1-208ENST00000522012 WASHC2AQ641Q2 1341 aa29.82■■■□□ 2.36
R3HCC1-208ENST00000522012 ABCC11Q96J66 1382 aa29.8■■■□□ 2.36
R3HCC1-208ENST00000522012 TMF1P82094 1093 aa29.79■■■□□ 2.36
R3HCC1-208ENST00000522012 PRAM1Q96QH2 718 aa29.79■■■□□ 2.36
R3HCC1-208ENST00000522012 POGKQ9P215 609 aa29.79■■■□□ 2.36
R3HCC1-208ENST00000522012 CCDC7Q96M83 1385 aa29.79■■■□□ 2.36
R3HCC1-208ENST00000522012 KIF7Q2M1P5 1343 aa29.78■■■□□ 2.36
R3HCC1-208ENST00000522012 POLR3GLQ9BT43 218 aa29.78■■■□□ 2.36
R3HCC1-208ENST00000522012 DIP2AQ14689 1571 aa29.78■■■□□ 2.36
R3HCC1-208ENST00000522012 SAFB2Q14151 953 aaKnown RBP eCLIP29.76■■■□□ 2.36
R3HCC1-208ENST00000522012 SLC24A1O60721 1099 aa29.75■■■□□ 2.35
R3HCC1-208ENST00000522012 DDX10Q13206 875 aaKnown RBP29.75■■■□□ 2.35
R3HCC1-208ENST00000522012 AMOTL2Q9Y2J4 779 aa29.74■■■□□ 2.35
R3HCC1-208ENST00000522012 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
R3HCC1-208ENST00000522012 DISP3Q9P2K9 1392 aa29.73■■■□□ 2.35
R3HCC1-208ENST00000522012 DIEXFQ68CQ4 756 aaKnown RBP29.73■■■□□ 2.35
R3HCC1-208ENST00000522012 WAPLQ7Z5K2 1190 aa29.72■■■□□ 2.35
R3HCC1-208ENST00000522012 POLR1AO95602 1720 aaPredicted RBP29.72■■■□□ 2.35
R3HCC1-208ENST00000522012 DLC1Q96QB1 1528 aa29.71■■■□□ 2.35
R3HCC1-208ENST00000522012 CERKQ8TCT0 537 aa29.71■■■□□ 2.35
R3HCC1-208ENST00000522012 SIRT1Q96EB6 747 aa29.71■■■□□ 2.35
R3HCC1-208ENST00000522012 PIK3R4Q99570 1358 aa29.71■■■□□ 2.35
R3HCC1-208ENST00000522012 ARHGEF28Q8N1W1 1705 aaKnown RBP29.71■■■□□ 2.35
R3HCC1-208ENST00000522012 SBNO2Q9Y2G9 1366 aa29.7■■■□□ 2.35
R3HCC1-208ENST00000522012 TECPR2O15040 1411 aa29.7■■■□□ 2.34
R3HCC1-208ENST00000522012 DMRT2Q9Y5R5 561 aa29.68■■■□□ 2.34
R3HCC1-208ENST00000522012 PLEKHH1Q9ULM0 1364 aa29.68■■■□□ 2.34
R3HCC1-208ENST00000522012 CDCA8Q53HL2 280 aa29.67■■■□□ 2.34
R3HCC1-208ENST00000522012 ROBO2Q9HCK4 1378 aa29.67■■■□□ 2.34
R3HCC1-208ENST00000522012 MINK1Q8N4C8 1332 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms