RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 MKRN3Q13064 507 aaKnown RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 MS4A3Q96HJ5 214 aa6.52□□□□□ -1.37
NPM1-207ENST00000521260 ZNF830Q96NB3 372 aaPredicted RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 RBM28Q9NW13 759 aaKnown RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 ZHX1Q9UKY1 873 aaPredicted RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 DHX57Q6P158 1386 aaKnown RBP6.52□□□□□ -1.37
NPM1-207ENST00000521260 CEP162Q5TB80 1403 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 TRIM66O15016 1216 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 MCM5P33992 734 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 GOLGA2Q08379 1002 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 NBPF20Q3BBV1 942 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 HSP90AB3PQ58FF7 597 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 PUS7Q96PZ0 661 aaKnown RBP6.51□□□□□ -1.37
NPM1-207ENST00000521260 GPBP1L1Q9HC44 474 aaPredicted RBP6.51□□□□□ -1.37
NPM1-207ENST00000521260 KIF3AQ9Y496 699 aa6.51□□□□□ -1.37
NPM1-207ENST00000521260 SMG6Q86US8 1419 aaKnown RBP6.5□□□□□ -1.37
NPM1-207ENST00000521260 SMARCA2P51531 1590 aa6.5□□□□□ -1.37
NPM1-207ENST00000521260 PEG3Q9GZU2 1588 aa6.5□□□□□ -1.37
NPM1-207ENST00000521260 SSR1P43307 286 aaKnown RBP6.5□□□□□ -1.37
NPM1-207ENST00000521260 CCDC173Q0VFZ6 552 aa6.5□□□□□ -1.37
NPM1-207ENST00000521260 DDX10Q13206 875 aaKnown RBP6.5□□□□□ -1.37
NPM1-207ENST00000521260 FAM13BQ9NYF5 915 aa6.5□□□□□ -1.37
NPM1-207ENST00000521260 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 TTLL13PA6NNM8 815 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 DPYSL4O14531 572 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 HMGN5P82970 282 aaKnown RBP6.49□□□□□ -1.37
NPM1-207ENST00000521260 FOXK1P85037 733 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 DSG2Q14126 1118 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 NBPF1Q3BBV0 1214 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 ZSCAN30Q86W11 494 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 KDM4CQ9H3R0 1056 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 CALCOCO1Q9P1Z2 691 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 RNF123Q5XPI4 1314 aa6.49□□□□□ -1.37
NPM1-207ENST00000521260 C19orf67A6NJJ6 358 aa6.48□□□□□ -1.37
NPM1-207ENST00000521260 ZSCAN20P17040 1043 aaPredicted RBP6.48□□□□□ -1.37
NPM1-207ENST00000521260 IRX6P78412 446 aaPredicted RBP6.48□□□□□ -1.37
NPM1-207ENST00000521260 PDE4DQ08499 809 aa6.48□□□□□ -1.37
NPM1-207ENST00000521260 KCNH8Q96L42 1107 aa6.48□□□□□ -1.37
NPM1-207ENST00000521260 GABPB1Q06547 395 aaPredicted RBP6.47□□□□□ -1.37
NPM1-207ENST00000521260 SKOR2Q2VWA4 1001 aaPredicted RBP6.47□□□□□ -1.37
NPM1-207ENST00000521260 PDCL2Q8N4E4 241 aa6.47□□□□□ -1.37
NPM1-207ENST00000521260 MNS1Q8NEH6 495 aa6.47□□□□□ -1.37
NPM1-207ENST00000521260 TIGD1Q96MW7 591 aa6.47□□□□□ -1.37
NPM1-207ENST00000521260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.47□□□□□ -1.37
NPM1-207ENST00000521260 CUX2O14529 1486 aa6.47□□□□□ -1.37
NPM1-207ENST00000521260 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
NPM1-207ENST00000521260 CCDC144AA2RUR9 1427 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 DDX11L8A8MPP1 907 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 KIF3CO14782 793 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 FRAT2O75474 233 aaPredicted RBP6.46□□□□□ -1.38
NPM1-207ENST00000521260 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
NPM1-207ENST00000521260 TNNT3P45378 269 aaPredicted RBP6.46□□□□□ -1.38
NPM1-207ENST00000521260 MFAP1P55081 439 aaKnown RBP6.46□□□□□ -1.38
NPM1-207ENST00000521260 CASC1Q6TDU7 716 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 SASS6Q6UVJ0 657 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 MICALL2Q8IY33 904 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 FEZ1Q99689 392 aa6.46□□□□□ -1.38
NPM1-207ENST00000521260 TMEM121BQ9BXQ6 578 aaPredicted RBP6.46□□□□□ -1.38
NPM1-207ENST00000521260 LMOD3Q0VAK6 560 aa6.45□□□□□ -1.38
NPM1-207ENST00000521260 PDCD7Q8N8D1 485 aaKnown RBP6.45□□□□□ -1.38
NPM1-207ENST00000521260 KRI1Q8N9T8 703 aaKnown RBP6.45□□□□□ -1.38
NPM1-207ENST00000521260 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
NPM1-207ENST00000521260 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
NPM1-207ENST00000521260 BMP2KQ9NSY1 1161 aaPredicted RBP6.45□□□□□ -1.38
NPM1-207ENST00000521260 RAI14Q9P0K7 980 aa6.45□□□□□ -1.38
NPM1-207ENST00000521260 RB1CC1Q8TDY2 1594 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 SCAPERQ9BY12 1400 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 UQCRHLA0A096LP55 91 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 TTC36A6NLP5 189 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 ZNF500O60304 480 aaPredicted RBP6.44□□□□□ -1.38
NPM1-207ENST00000521260 UQCRHP07919 91 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 DPY19L2Q6NUT2 758 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 ZNF771Q7L3S4 317 aaPredicted RBP6.44□□□□□ -1.38
NPM1-207ENST00000521260 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 ZNF592Q92610 1267 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 MYCBPQ99417 103 aaPredicted RBP6.44□□□□□ -1.38
NPM1-207ENST00000521260 CARD10Q9BWT7 1032 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 BSDC1Q9NW68 430 aaPredicted RBP6.44□□□□□ -1.38
NPM1-207ENST00000521260 NUDCQ9Y266 331 aa6.44□□□□□ -1.38
NPM1-207ENST00000521260 MINK1Q8N4C8 1332 aaPredicted RBP6.44□□□□□ -1.38
NPM1-207ENST00000521260 VGLL3A8MV65 326 aa6.43□□□□□ -1.38
NPM1-207ENST00000521260 KIF1CO43896 1103 aaKnown RBP6.43□□□□□ -1.38
NPM1-207ENST00000521260 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
NPM1-207ENST00000521260 AMHR2Q16671 573 aa6.43□□□□□ -1.38
NPM1-207ENST00000521260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.43□□□□□ -1.38
NPM1-207ENST00000521260 UPF2Q9HAU5 1272 aaKnown RBP6.43□□□□□ -1.38
NPM1-207ENST00000521260 GOLGA6L6A8MZA4 724 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 GOLGA6L22H0YM25 854 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 SATB1Q01826 763 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 MAP2K5Q13163 448 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 FAM161AQ3B820 660 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 CGNQ9P2M7 1197 aaKnown RBP6.42□□□□□ -1.38
NPM1-207ENST00000521260 TRIM35Q9UPQ4 493 aa6.42□□□□□ -1.38
NPM1-207ENST00000521260 PTGER2P43116 358 aa6.41□□□□□ -1.38
NPM1-207ENST00000521260 RIPK4P57078 832 aa6.41□□□□□ -1.38
NPM1-207ENST00000521260 IRX5P78411 483 aaPredicted RBP6.41□□□□□ -1.38
NPM1-207ENST00000521260 NBPF9Q3BBW0 867 aa6.41□□□□□ -1.38
NPM1-207ENST00000521260 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms