RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
PABPC1-216ENST00000520868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
PABPC1-216ENST00000520868 PXYLP1Q8TE99 480 aa12.26□□□□□ -0.45
PABPC1-216ENST00000520868 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
PABPC1-216ENST00000520868 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
PABPC1-216ENST00000520868 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
PABPC1-216ENST00000520868 NACADO15069 1562 aa12.25□□□□□ -0.45
PABPC1-216ENST00000520868 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
PABPC1-216ENST00000520868 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
PABPC1-216ENST00000520868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
PABPC1-216ENST00000520868 A0A0G2JS52 829 aa12.23□□□□□ -0.45
PABPC1-216ENST00000520868 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
PABPC1-216ENST00000520868 KCNC4Q03721 635 aa12.22□□□□□ -0.45
PABPC1-216ENST00000520868 PHOX2BQ99453 314 aa12.22□□□□□ -0.45
PABPC1-216ENST00000520868 MTRQ99707 1265 aa12.22□□□□□ -0.45
PABPC1-216ENST00000520868 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
PABPC1-216ENST00000520868 SLC10A3P09131 477 aa12.19□□□□□ -0.46
PABPC1-216ENST00000520868 COPS2P61201 443 aa12.18□□□□□ -0.46
PABPC1-216ENST00000520868 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
PABPC1-216ENST00000520868 CFHP08603 1231 aa12.14□□□□□ -0.47
PABPC1-216ENST00000520868 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
PABPC1-216ENST00000520868 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
PABPC1-216ENST00000520868 IL21Q9HBE4 155 aa12.14□□□□□ -0.47
PABPC1-216ENST00000520868 MINK1Q8N4C8 1332 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-216ENST00000520868 IRF6O14896 467 aa12.12□□□□□ -0.47
PABPC1-216ENST00000520868 BCANQ96GW7 911 aa12.12□□□□□ -0.47
PABPC1-216ENST00000520868 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
PABPC1-216ENST00000520868 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
PABPC1-216ENST00000520868 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
PABPC1-216ENST00000520868 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-216ENST00000520868 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
PABPC1-216ENST00000520868 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
PABPC1-216ENST00000520868 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
PABPC1-216ENST00000520868 KMT5BQ4FZB7 885 aa12.07□□□□□ -0.48
PABPC1-216ENST00000520868 TLL1O43897 1013 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 ZMYND10O75800 440 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
PABPC1-216ENST00000520868 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
PABPC1-216ENST00000520868 ZPR1O75312 459 aa12.04□□□□□ -0.48
PABPC1-216ENST00000520868 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
PABPC1-216ENST00000520868 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
PABPC1-216ENST00000520868 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
PABPC1-216ENST00000520868 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
PABPC1-216ENST00000520868 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
PABPC1-216ENST00000520868 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-216ENST00000520868 RGS20O76081 388 aa12□□□□□ -0.49
PABPC1-216ENST00000520868 CLCN1P35523 988 aa11.97□□□□□ -0.49
PABPC1-216ENST00000520868 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.97□□□□□ -0.49
PABPC1-216ENST00000520868 FUT2Q10981 343 aa11.96□□□□□ -0.49
PABPC1-216ENST00000520868 GCGRP47871 477 aa11.95□□□□□ -0.5
PABPC1-216ENST00000520868 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
PABPC1-216ENST00000520868 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
PABPC1-216ENST00000520868 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
PABPC1-216ENST00000520868 CD46P15529 392 aa11.93□□□□□ -0.5
PABPC1-216ENST00000520868 PPEF1O14829 653 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-216ENST00000520868 NR1I2O75469 434 aa11.92□□□□□ -0.5
PABPC1-216ENST00000520868 S1PR4O95977 384 aa11.92□□□□□ -0.5
PABPC1-216ENST00000520868 MORN1Q5T089 497 aa11.92□□□□□ -0.5
PABPC1-216ENST00000520868 PRKD2Q9BZL6 878 aa11.92□□□□□ -0.5
PABPC1-216ENST00000520868 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
PABPC1-216ENST00000520868 AK7Q96M32 723 aa11.9□□□□□ -0.5
PABPC1-216ENST00000520868 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
PABPC1-216ENST00000520868 AMHR2Q16671 573 aa11.89□□□□□ -0.51
PABPC1-216ENST00000520868 IRX2Q9BZI1 471 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-216ENST00000520868 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
PABPC1-216ENST00000520868 ADH1BP00325 375 aa11.88□□□□□ -0.51
PABPC1-216ENST00000520868 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
PABPC1-216ENST00000520868 HLA-CQ95604 372 aa11.88□□□□□ -0.51
PABPC1-216ENST00000520868 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
PABPC1-216ENST00000520868 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-216ENST00000520868 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
PABPC1-216ENST00000520868 EMID1Q96A84 441 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-216ENST00000520868 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-216ENST00000520868 GGCXP38435 758 aa11.86□□□□□ -0.51
PABPC1-216ENST00000520868 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
PABPC1-216ENST00000520868 SPSB2Q99619 263 aa11.85□□□□□ -0.51
PABPC1-216ENST00000520868 TRIM66O15016 1216 aa11.84□□□□□ -0.51
PABPC1-216ENST00000520868 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
PABPC1-216ENST00000520868 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
PABPC1-216ENST00000520868 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
PABPC1-216ENST00000520868 KDM4AO75164 1064 aa11.82□□□□□ -0.52
PABPC1-216ENST00000520868 USP46P62068 366 aa11.82□□□□□ -0.52
PABPC1-216ENST00000520868 PLA2G2CQ5R387 149 aa11.82□□□□□ -0.52
PABPC1-216ENST00000520868 FAM160A2Q8N612 972 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-216ENST00000520868 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
PABPC1-216ENST00000520868 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
PABPC1-216ENST00000520868 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-216ENST00000520868 GUCA2AQ02747 115 aa11.81□□□□□ -0.52
PABPC1-216ENST00000520868 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
PABPC1-216ENST00000520868 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
PABPC1-216ENST00000520868 CC2D2AQ9P2K1 1620 aa11.8□□□□□ -0.52
PABPC1-216ENST00000520868 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-216ENST00000520868 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
PABPC1-216ENST00000520868 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
PABPC1-216ENST00000520868 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
PABPC1-216ENST00000520868 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-216ENST00000520868 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms